RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 REPS1Q96D71 796 aa18.72■□□□□ 0.59
SHANK3-203ENST00000445220 ATXN3LQ9H3M9 355 aa18.72■□□□□ 0.59
SHANK3-203ENST00000445220 MUC13Q9H3R2 512 aa18.72■□□□□ 0.59
SHANK3-203ENST00000445220 XPR1Q9UBH6 696 aa18.72■□□□□ 0.59
SHANK3-203ENST00000445220 KLQ9UEF7 1012 aa18.72■□□□□ 0.59
SHANK3-203ENST00000445220 YWHAQP27348 245 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 LLGL2Q6P1M3 1020 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 SLC27A1Q6PCB7 646 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 MCOLN3Q8TDD5 553 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 RAB2BQ8WUD1 216 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 SLC47A1Q96FL8 570 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 RNF157Q96PX1 679 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 DNAJB4Q9UDY4 337 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 CYP3A7-CYP3A51PA0A087WV96 503 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 E7ENX8 843 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 ITGB6P18564 788 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 ATF4P18848 351 aaPredicted RBP18.71■□□□□ 0.59
SHANK3-203ENST00000445220 CYP3A7P24462 503 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 ECT2LQ008S8 904 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 SCN1BQ07699 218 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 GRIK4Q16099 956 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 TUBA3EQ6PEY2 450 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 GLIS3Q8NEA6 775 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 TRPV1Q8NER1 839 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 SPOCK2Q92563 424 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 DNAJC1Q96KC8 554 aaKnown RBP18.71■□□□□ 0.59
SHANK3-203ENST00000445220 OMDQ99983 421 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 C2orf71A6NGG8 1288 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 FMO4P31512 558 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 P2RY8Q86VZ1 359 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 ERI1Q8IV48 349 aaKnown RBP18.71■□□□□ 0.59
SHANK3-203ENST00000445220 DQX1Q8TE96 717 aaKnown RBP18.71■□□□□ 0.59
SHANK3-203ENST00000445220 ZNF112Q9UJU3 913 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 PCDHGA3Q9Y5H0 932 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 EML1O00423 815 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 PRLP01236 227 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 RHOCP08134 193 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 YBX3P16989 372 aaKnown RBP eCLIP18.71■□□□□ 0.59
SHANK3-203ENST00000445220 MYL9P24844 172 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 CLK2P49760 499 aaKnown RBP18.71■□□□□ 0.59
SHANK3-203ENST00000445220 INSCQ1MX18 579 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 ZNF280DQ6N043 979 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 SCUBE3Q8IX30 993 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 ZFAND2BQ8WV99 257 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 SHC3Q92529 594 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 GRIN2DO15399 1336 aa18.71■□□□□ 0.59
SHANK3-203ENST00000445220 CHRNGP07510 517 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 CRATP43155 626 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 RPS9P46781 194 aaKnown RBP18.7■□□□□ 0.58
SHANK3-203ENST00000445220 CXXC5Q7LFL8 322 aaKnown RBP18.7■□□□□ 0.58
SHANK3-203ENST00000445220 PEG10Q86TG7 708 aaKnown RBP18.7■□□□□ 0.58
SHANK3-203ENST00000445220 GATAD2AQ86YP4 633 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 DEFB106AQ8N104 65 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 PHF10Q8WUB8 498 aaKnown RBP18.7■□□□□ 0.58
SHANK3-203ENST00000445220 LPGAT1Q92604 370 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 NXNL1Q96CM4 212 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 SLC38A2Q96QD8 506 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 OGDHLQ9ULD0 1010 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.7■□□□□ 0.58
SHANK3-203ENST00000445220 PEX16Q9Y5Y5 336 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 A0A1W2PQ72 361 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 SMIM11AP58511 58 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 RHBDL3P58872 404 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 CA9Q16790 459 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 PRR23BQ6ZRT6 265 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 C1orf186Q6ZWK4 172 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 PURBQ96QR8 312 aaKnown RBP18.7■□□□□ 0.58
SHANK3-203ENST00000445220 SNX7Q9UNH6 387 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 AZIN1O14977 448 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 PSIP1O75475 530 aaKnown RBP18.7■□□□□ 0.58
SHANK3-203ENST00000445220 THRBP10828 461 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 IST1P53990 364 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 TGM3Q08188 693 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 ADIGQ0VDE8 80 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 TMEM132BQ14DG7 1078 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 CCNYL2Q5T2Q4 361 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 CNTD1Q8N815 330 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 TMEM134Q9H6X4 195 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 CORO2BQ9UQ03 480 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 USP20Q9Y2K6 914 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 GUCA1AP43080 201 aaPredicted RBP18.7■□□□□ 0.58
SHANK3-203ENST00000445220 CTXN3Q4LDR2 81 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 ERICH5Q6P6B1 374 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 PHF13Q86YI8 300 aaPredicted RBP18.7■□□□□ 0.58
SHANK3-203ENST00000445220 C12orf56Q8IXR9 622 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 CBR4Q8N4T8 237 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 CDK5RAP1Q96SZ6 601 aaKnown RBP18.7■□□□□ 0.58
SHANK3-203ENST00000445220 OSMRQ99650 979 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 SYT15Q9BQS2 421 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 TRMOQ9BU70 441 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 WDR55Q9H6Y2 383 aaPredicted RBP18.7■□□□□ 0.58
SHANK3-203ENST00000445220 TRPM5Q9NZQ8 1165 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 E5RJQ4 531 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 STK25O00506 426 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 TSPAN4O14817 238 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 RAMP2O60895 175 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 CYP4B1P13584 511 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 ZNF143P52747 638 aaPredicted RBP18.7■□□□□ 0.58
SHANK3-203ENST00000445220 RHAGQ02094 409 aa18.7■□□□□ 0.58
SHANK3-203ENST00000445220 ACSBG2Q5FVE4 666 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms