RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 ECHDC3Q96DC8 303 aa12.35□□□□□ -0.43
LTBR-204ENST00000444814 KLHDC7BQ96G42 594 aa12.35□□□□□ -0.43
LTBR-204ENST00000444814 LENG8Q96PV6 779 aaPredicted RBP12.35□□□□□ -0.43
LTBR-204ENST00000444814 LGMNQ99538 433 aa12.35□□□□□ -0.43
LTBR-204ENST00000444814 IL12RB2Q99665 862 aa12.35□□□□□ -0.43
LTBR-204ENST00000444814 NOD2Q9HC29 1040 aa12.35□□□□□ -0.43
LTBR-204ENST00000444814 GOLGA6AQ9NYA3 693 aa12.35□□□□□ -0.43
LTBR-204ENST00000444814 ANKRD6Q9Y2G4 727 aa12.35□□□□□ -0.43
LTBR-204ENST00000444814 SPAG17Q6Q759 2223 aa12.34□□□□□ -0.43
LTBR-204ENST00000444814 SLC31A1O15431 190 aa12.34□□□□□ -0.43
LTBR-204ENST00000444814 HTRA2O43464 458 aaPredicted RBP12.34□□□□□ -0.43
LTBR-204ENST00000444814 MAP3K6O95382 1288 aa12.34□□□□□ -0.43
LTBR-204ENST00000444814 ELFN1P0C7U0 828 aa12.34□□□□□ -0.43
LTBR-204ENST00000444814 ZNF883P0CG24 379 aa12.34□□□□□ -0.43
LTBR-204ENST00000444814 CR2P20023 1033 aa12.34□□□□□ -0.43
LTBR-204ENST00000444814 ID4P47928 161 aa12.34□□□□□ -0.43
LTBR-204ENST00000444814 CSNK1EP49674 416 aaKnown RBP12.34□□□□□ -0.43
LTBR-204ENST00000444814 PEX5P50542 639 aa12.34□□□□□ -0.43
LTBR-204ENST00000444814 MAXP61244 160 aa12.34□□□□□ -0.43
LTBR-204ENST00000444814 SLC10A2Q12908 348 aaPredicted RBP12.34□□□□□ -0.43
LTBR-204ENST00000444814 GRIK2Q13002 908 aa12.34□□□□□ -0.43
LTBR-204ENST00000444814 PTK2BQ14289 1009 aa12.34□□□□□ -0.43
LTBR-204ENST00000444814 ZNF284Q2VY69 593 aa12.34□□□□□ -0.43
LTBR-204ENST00000444814 TMEM259Q4ZIN3 620 aa12.34□□□□□ -0.43
LTBR-204ENST00000444814 TEX44Q53QW1 395 aa12.34□□□□□ -0.43
LTBR-204ENST00000444814 MINDY1Q8N5J2 469 aa12.34□□□□□ -0.43
LTBR-204ENST00000444814 HES6Q96HZ4 224 aa12.34□□□□□ -0.43
LTBR-204ENST00000444814 SLC6A18Q96N87 628 aa12.34□□□□□ -0.43
LTBR-204ENST00000444814 C1QTNF2Q9BXJ5 285 aa12.34□□□□□ -0.43
LTBR-204ENST00000444814 HEMGNQ9BXL5 484 aa12.34□□□□□ -0.43
LTBR-204ENST00000444814 SMOC1Q9H4F8 434 aa12.34□□□□□ -0.43
LTBR-204ENST00000444814 PCDH12Q9NPG4 1184 aa12.34□□□□□ -0.43
LTBR-204ENST00000444814 KLHL8Q9P2G9 620 aaPredicted RBP12.34□□□□□ -0.43
LTBR-204ENST00000444814 TRIM10Q9UDY6 481 aa12.34□□□□□ -0.43
LTBR-204ENST00000444814 PCDHB9Q9Y5E1 797 aa12.34□□□□□ -0.43
LTBR-204ENST00000444814 RAI2Q9Y5P3 530 aa12.34□□□□□ -0.43
LTBR-204ENST00000444814 NYNRINQ9P2P1 1898 aaKnown RBP12.34□□□□□ -0.43
LTBR-204ENST00000444814 A0A1B0GVT2 93 aa12.33□□□□□ -0.44
LTBR-204ENST00000444814 PATE3B3GLJ2 98 aa12.33□□□□□ -0.44
LTBR-204ENST00000444814 KCNK1O00180 336 aa12.33□□□□□ -0.44
LTBR-204ENST00000444814 TLR4O00206 839 aa12.33□□□□□ -0.44
LTBR-204ENST00000444814 PSMD11O00231 422 aa12.33□□□□□ -0.44
LTBR-204ENST00000444814 PGLSO95336 258 aa12.33□□□□□ -0.44
LTBR-204ENST00000444814 ZNF30P17039 623 aa12.33□□□□□ -0.44
LTBR-204ENST00000444814 ACTN2P35609 894 aa12.33□□□□□ -0.44
LTBR-204ENST00000444814 ABL2P42684 1182 aa12.33□□□□□ -0.44
LTBR-204ENST00000444814 RABIFP47224 123 aa12.33□□□□□ -0.44
LTBR-204ENST00000444814 RGRP47804 291 aa12.33□□□□□ -0.44
LTBR-204ENST00000444814 MARCKSL1P49006 195 aa12.33□□□□□ -0.44
LTBR-204ENST00000444814 CCT8P50990 548 aa12.33□□□□□ -0.44
LTBR-204ENST00000444814 CCDC173Q0VFZ6 552 aa12.33□□□□□ -0.44
LTBR-204ENST00000444814 FOXD4Q12950 439 aaPredicted RBP12.33□□□□□ -0.44
LTBR-204ENST00000444814 PRPSAP1Q14558 356 aa12.33□□□□□ -0.44
LTBR-204ENST00000444814 PRKD1Q15139 912 aaPredicted RBP12.33□□□□□ -0.44
LTBR-204ENST00000444814 NOMO1Q15155 1222 aa12.33□□□□□ -0.44
LTBR-204ENST00000444814 RSPO4Q2I0M5 234 aaPredicted RBP12.33□□□□□ -0.44
LTBR-204ENST00000444814 HS1BP3Q53T59 392 aa12.33□□□□□ -0.44
LTBR-204ENST00000444814 TCEAL6Q6IPX3 200 aa12.33□□□□□ -0.44
LTBR-204ENST00000444814 DARS2Q6PI48 645 aaKnown RBP12.33□□□□□ -0.44
LTBR-204ENST00000444814 DPPA4Q7L190 304 aa12.33□□□□□ -0.44
LTBR-204ENST00000444814 ZC3H18Q86VM9 953 aaKnown RBP12.33□□□□□ -0.44
LTBR-204ENST00000444814 C1orf216Q8TAB5 229 aa12.33□□□□□ -0.44
LTBR-204ENST00000444814 HTR3CQ8WXA8 447 aa12.33□□□□□ -0.44
LTBR-204ENST00000444814 TCEAL3Q969E4 200 aa12.33□□□□□ -0.44
LTBR-204ENST00000444814 IFT43Q96FT9 208 aa12.33□□□□□ -0.44
LTBR-204ENST00000444814 QKIQ96PU8 341 aaKnown RBP eCLIP12.33□□□□□ -0.445e-17■■■■■ 95.5
LTBR-204ENST00000444814 SLC25A51Q9H1U9 297 aa12.33□□□□□ -0.44
LTBR-204ENST00000444814 CARD9Q9H257 536 aa12.33□□□□□ -0.44
LTBR-204ENST00000444814 ERVMER34-1Q9H9K5 563 aa12.33□□□□□ -0.44
LTBR-204ENST00000444814 PCDHGB2Q9Y5G2 931 aa12.33□□□□□ -0.44
LTBR-204ENST00000444814 CAPN6Q9Y6Q1 641 aa12.33□□□□□ -0.44
LTBR-204ENST00000444814 IGLON5A6NGN9 336 aa12.32□□□□□ -0.44
LTBR-204ENST00000444814 C4orf47A7E2U8 309 aa12.32□□□□□ -0.44
LTBR-204ENST00000444814 TRAFD1O14545 582 aaPredicted RBP12.32□□□□□ -0.44
LTBR-204ENST00000444814 MUSKO15146 869 aa12.32□□□□□ -0.44
LTBR-204ENST00000444814 KIF5CO60282 957 aa12.32□□□□□ -0.44
LTBR-204ENST00000444814 PEX14O75381 377 aa12.32□□□□□ -0.44
LTBR-204ENST00000444814 HLA-DQB2P05538 268 aa12.32□□□□□ -0.44
LTBR-204ENST00000444814 PYGLP06737 847 aa12.32□□□□□ -0.44
LTBR-204ENST00000444814 PYGMP11217 842 aa12.32□□□□□ -0.44
LTBR-204ENST00000444814 VIPR1P32241 457 aa12.32□□□□□ -0.44
LTBR-204ENST00000444814 MMP12P39900 470 aa12.32□□□□□ -0.44
LTBR-204ENST00000444814 EIF3EP60228 445 aaKnown RBP12.32□□□□□ -0.44
LTBR-204ENST00000444814 UAP1L1Q3KQV9 507 aa12.32□□□□□ -0.44
LTBR-204ENST00000444814 SEL1L3Q68CR1 1132 aa12.32□□□□□ -0.44
LTBR-204ENST00000444814 NPNTQ6UXI9 565 aa12.32□□□□□ -0.44
LTBR-204ENST00000444814 KYAT3Q6YP21 454 aaKnown RBP12.32□□□□□ -0.44
LTBR-204ENST00000444814 RAVER1Q8IY67 606 aaKnown RBP12.32□□□□□ -0.44
LTBR-204ENST00000444814 PGBD5Q8N414 524 aa12.32□□□□□ -0.44
LTBR-204ENST00000444814 AGAP3Q96P47 875 aa12.32□□□□□ -0.44
LTBR-204ENST00000444814 GAREM1Q9H706 876 aa12.32□□□□□ -0.44
LTBR-204ENST00000444814 DNAAF2Q9NVR5 837 aaKnown RBP12.32□□□□□ -0.44
LTBR-204ENST00000444814 PCDHGC4Q9Y5F7 938 aa12.32□□□□□ -0.44
LTBR-204ENST00000444814 H3BM21 787 aa12.31□□□□□ -0.44
LTBR-204ENST00000444814 PDE2AO00408 941 aaPredicted RBP12.31□□□□□ -0.44
LTBR-204ENST00000444814 MMP20O60882 483 aa12.31□□□□□ -0.44
LTBR-204ENST00000444814 ANXA9O76027 345 aa12.31□□□□□ -0.44
LTBR-204ENST00000444814 PAK4O96013 591 aaPredicted RBP12.31□□□□□ -0.44
LTBR-204ENST00000444814 RBP3P10745 1247 aa12.31□□□□□ -0.44
LTBR-204ENST00000444814 PRLRP16471 622 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms