RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 H3BM21 787 aa18.96■□□□□ 0.63
ATPAF2-201ENST00000444058 HTRA2O43464 458 aaPredicted RBP18.96■□□□□ 0.63
ATPAF2-201ENST00000444058 RFPL3O75679 317 aa18.96■□□□□ 0.63
ATPAF2-201ENST00000444058 C6P13671 934 aa18.96■□□□□ 0.63
ATPAF2-201ENST00000444058 IGFALSP35858 605 aa18.96■□□□□ 0.63
ATPAF2-201ENST00000444058 GARSP41250 739 aaKnown RBP18.96■□□□□ 0.63
ATPAF2-201ENST00000444058 MMP13P45452 471 aa18.96■□□□□ 0.63
ATPAF2-201ENST00000444058 ACADVLP49748 655 aa18.96■□□□□ 0.63
ATPAF2-201ENST00000444058 PEX5P50542 639 aa18.96■□□□□ 0.63
ATPAF2-201ENST00000444058 THOP1P52888 689 aa18.96■□□□□ 0.63
ATPAF2-201ENST00000444058 GALNT2Q10471 571 aa18.96■□□□□ 0.63
ATPAF2-201ENST00000444058 MMRN1Q13201 1228 aa18.96■□□□□ 0.63
ATPAF2-201ENST00000444058 LRRC14Q15048 493 aa18.96■□□□□ 0.63
ATPAF2-201ENST00000444058 PROX2Q3B8N5 592 aa18.96■□□□□ 0.63
ATPAF2-201ENST00000444058 NCBP2-AS2Q69YL0 99 aa18.96■□□□□ 0.63
ATPAF2-201ENST00000444058 TMPRSS12Q86WS5 348 aa18.96■□□□□ 0.63
ATPAF2-201ENST00000444058 TEX26Q8N6G2 289 aa18.96■□□□□ 0.63
ATPAF2-201ENST00000444058 RFFLQ8WZ73 363 aa18.96■□□□□ 0.63
ATPAF2-201ENST00000444058 TBATAQ96M53 351 aa18.96■□□□□ 0.63
ATPAF2-201ENST00000444058 TSGA13Q96PP4 275 aa18.96■□□□□ 0.63
ATPAF2-201ENST00000444058 DUSP23Q9BVJ7 150 aa18.96■□□□□ 0.63
ATPAF2-201ENST00000444058 NLGN3Q9NZ94 848 aa18.96■□□□□ 0.63
ATPAF2-201ENST00000444058 USP24Q9UPU5 2620 aa18.95■□□□□ 0.62
ATPAF2-201ENST00000444058 TMEM110-MUSTN1A8MSY1 372 aa18.95■□□□□ 0.62
ATPAF2-201ENST00000444058 TRIM38O00635 465 aa18.95■□□□□ 0.62
ATPAF2-201ENST00000444058 SCAMP1O15126 338 aa18.95■□□□□ 0.62
ATPAF2-201ENST00000444058 SIGLEC6O43699 453 aa18.95■□□□□ 0.62
ATPAF2-201ENST00000444058 GIMD1P0DJR0 217 aa18.95■□□□□ 0.62
ATPAF2-201ENST00000444058 ALPPL2P10696 532 aa18.95■□□□□ 0.62
ATPAF2-201ENST00000444058 ACP1P24666 158 aa18.95■□□□□ 0.62
ATPAF2-201ENST00000444058 NFKBIAP25963 317 aa18.95■□□□□ 0.62
ATPAF2-201ENST00000444058 LIG3P49916 1009 aa18.95■□□□□ 0.62
ATPAF2-201ENST00000444058 LRRC38Q5VT99 294 aa18.95■□□□□ 0.62
ATPAF2-201ENST00000444058 TIGD7Q6NT04 549 aaPredicted RBP18.95■□□□□ 0.62
ATPAF2-201ENST00000444058 DPPA4Q7L190 304 aa18.95■□□□□ 0.62
ATPAF2-201ENST00000444058 CPNE8Q86YQ8 564 aa18.95■□□□□ 0.62
ATPAF2-201ENST00000444058 PGBD5Q8N414 524 aa18.95■□□□□ 0.62
ATPAF2-201ENST00000444058 BTN2A2Q8WVV5 523 aa18.95■□□□□ 0.62
ATPAF2-201ENST00000444058 NSMCE3Q96MG7 304 aa18.95■□□□□ 0.62
ATPAF2-201ENST00000444058 SCUBE2Q9NQ36 999 aa18.95■□□□□ 0.62
ATPAF2-201ENST00000444058 MBNL1Q9NR56 388 aaKnown RBP18.95■□□□□ 0.62
ATPAF2-201ENST00000444058 UCKL1Q9NWZ5 548 aa18.95■□□□□ 0.62
ATPAF2-201ENST00000444058 AMACRQ9UHK6 382 aa18.95■□□□□ 0.62
ATPAF2-201ENST00000444058 SPEGQ15772 3267 aa18.95■□□□□ 0.62
ATPAF2-201ENST00000444058 CACNA1BQ00975 2339 aa18.94■□□□□ 0.62
ATPAF2-201ENST00000444058 KMT2BQ9UMN6 2715 aaPredicted RBP18.94■□□□□ 0.62
ATPAF2-201ENST00000444058 MFSD11O43934 449 aa18.94■□□□□ 0.62
ATPAF2-201ENST00000444058 MX2P20592 715 aa18.94■□□□□ 0.62
ATPAF2-201ENST00000444058 CES1P23141 567 aa18.94■□□□□ 0.62
ATPAF2-201ENST00000444058 KDELR1P24390 212 aa18.94■□□□□ 0.62
ATPAF2-201ENST00000444058 CCNCP24863 283 aa18.94■□□□□ 0.62
ATPAF2-201ENST00000444058 GJC1P36383 396 aa18.94■□□□□ 0.62
ATPAF2-201ENST00000444058 SLC1A1P43005 524 aa18.94■□□□□ 0.62
ATPAF2-201ENST00000444058 RALGDSQ12967 914 aa18.94■□□□□ 0.62
ATPAF2-201ENST00000444058 DNAJC3Q13217 504 aa18.94■□□□□ 0.62
ATPAF2-201ENST00000444058 MESDQ14696 234 aa18.94■□□□□ 0.62
ATPAF2-201ENST00000444058 IRF4Q15306 451 aa18.94■□□□□ 0.62
ATPAF2-201ENST00000444058 IFI16Q16666 785 aaKnown RBP18.94■□□□□ 0.62
ATPAF2-201ENST00000444058 WSCD2Q2TBF2 565 aa18.94■□□□□ 0.62
ATPAF2-201ENST00000444058 TPRG1LQ5T0D9 272 aa18.94■□□□□ 0.62
ATPAF2-201ENST00000444058 MACC1Q6ZN28 852 aa18.94■□□□□ 0.62
ATPAF2-201ENST00000444058 PAF1Q8N7H5 531 aa18.94■□□□□ 0.62
ATPAF2-201ENST00000444058 TC2NQ8N9U0 490 aa18.94■□□□□ 0.62
ATPAF2-201ENST00000444058 FAM181AQ8N9Y4 354 aa18.94■□□□□ 0.62
ATPAF2-201ENST00000444058 MAML1Q92585 1016 aa18.94■□□□□ 0.62
ATPAF2-201ENST00000444058 ANP32EQ9BTT0 268 aa18.94■□□□□ 0.62
ATPAF2-201ENST00000444058 USP29Q9HBJ7 922 aa18.94■□□□□ 0.62
ATPAF2-201ENST00000444058 NOD2Q9HC29 1040 aa18.94■□□□□ 0.62
ATPAF2-201ENST00000444058 HAUS2Q9NVX0 235 aa18.94■□□□□ 0.62
ATPAF2-201ENST00000444058 IGF2RP11717 2491 aa18.94■□□□□ 0.62
ATPAF2-201ENST00000444058 TPP1O14773 563 aa18.93■□□□□ 0.62
ATPAF2-201ENST00000444058 MATN3O15232 486 aa18.93■□□□□ 0.62
ATPAF2-201ENST00000444058 LZTS3O60299 673 aaPredicted RBP18.93■□□□□ 0.62
ATPAF2-201ENST00000444058 LCA5LO95447 670 aa18.93■□□□□ 0.62
ATPAF2-201ENST00000444058 EIF2B5Q13144 721 aaKnown RBP18.93■□□□□ 0.62
ATPAF2-201ENST00000444058 ZNF542PQ5EBM4 170 aa18.93■□□□□ 0.62
ATPAF2-201ENST00000444058 ALG1LQ6GMV1 187 aa18.93■□□□□ 0.62
ATPAF2-201ENST00000444058 DHRS13Q6UX07 377 aa18.93■□□□□ 0.62
ATPAF2-201ENST00000444058 LIPIQ6XZB0 460 aa18.93■□□□□ 0.62
ATPAF2-201ENST00000444058 CACTIN-AS1Q8N1I8 211 aa18.93■□□□□ 0.62
ATPAF2-201ENST00000444058 PQLC3Q8N755 202 aa18.93■□□□□ 0.62
ATPAF2-201ENST00000444058 ZNF548Q8NEK5 533 aaPredicted RBP18.93■□□□□ 0.62
ATPAF2-201ENST00000444058 RAPGEF5Q92565 580 aa18.93■□□□□ 0.62
ATPAF2-201ENST00000444058 MRFAP1L1Q96HT8 127 aa18.93■□□□□ 0.62
ATPAF2-201ENST00000444058 RNF157Q96PX1 679 aa18.93■□□□□ 0.62
ATPAF2-201ENST00000444058 POLR1EQ9GZS1 481 aaKnown RBP18.93■□□□□ 0.62
ATPAF2-201ENST00000444058 KCTD5Q9NXV2 234 aa18.93■□□□□ 0.62
ATPAF2-201ENST00000444058 NCKIPSDQ9NZQ3 722 aa18.93■□□□□ 0.62
ATPAF2-201ENST00000444058 KLF15Q9UIH9 416 aa18.93■□□□□ 0.62
ATPAF2-201ENST00000444058 PHTF1Q9UMS5 762 aa18.93■□□□□ 0.62
ATPAF2-201ENST00000444058 PCDHGC4Q9Y5F7 938 aa18.93■□□□□ 0.62
ATPAF2-201ENST00000444058 FRYQ5TBA9 3013 aa18.92■□□□□ 0.62
ATPAF2-201ENST00000444058 ELFN1P0C7U0 828 aa18.92■□□□□ 0.62
ATPAF2-201ENST00000444058 CKMT1AP12532 417 aa18.92■□□□□ 0.62
ATPAF2-201ENST00000444058 JUNDP17535 347 aa18.92■□□□□ 0.62
ATPAF2-201ENST00000444058 HTR1BP28222 390 aa18.92■□□□□ 0.62
ATPAF2-201ENST00000444058 BLKP51451 505 aa18.92■□□□□ 0.62
ATPAF2-201ENST00000444058 HADHBP55084 474 aaKnown RBP18.92■□□□□ 0.62
ATPAF2-201ENST00000444058 E2F1Q01094 437 aa18.92■□□□□ 0.62
ATPAF2-201ENST00000444058 MTM1Q13496 603 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms