RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 MMP20O60882 483 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 MT-CYBP00156 380 aaPredicted RBP12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 CFIP05156 583 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 ALPIP09923 528 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 SERPINA4P29622 427 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 IGFALSP35858 605 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 CD86P42081 329 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 CLDN2P57739 230 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 RAD51Q06609 339 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 GRM3Q14832 879 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 SHBQ15464 509 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 KCTD19Q17RG1 926 aaPredicted RBP12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 TEX44Q53QW1 395 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 RALGPS1Q5JS13 557 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 NAPEPLDQ6IQ20 393 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 NEK5Q6P3R8 708 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 BRAT1Q6PJG6 821 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 KDELC1Q6UW63 502 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 DPPA4Q7L190 304 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 TTC7BQ86TV6 843 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 TSPAN33Q86UF1 283 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 CBARPQ8N350 705 aaPredicted RBP12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 SLC35F6Q8N357 371 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 TP53I13Q8NBR0 393 aaPredicted RBP12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 SPATA22Q8NHS9 363 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 SLC35B2Q8TB61 432 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 TFB1MQ8WVM0 346 aaKnown RBP12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 ATG4AQ8WYN0 398 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 RAB7BQ96AH8 199 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 IMP4Q96G21 291 aaKnown RBP12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 BMFQ96LC9 184 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 TEKT5Q96M29 485 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 AGAP3Q96P47 875 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 MCCC1Q96RQ3 725 aaPredicted RBP12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 RBM15Q96T37 977 aaKnown RBP eCLIP12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 WRAP53Q9BUR4 548 aaKnown RBP12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 EDEM2Q9BV94 578 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 GLOD4Q9HC38 313 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 TRMT1Q9NXH9 659 aaKnown RBP12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 SEPT10Q9P0V9 454 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 B4GALT6Q9UBX8 382 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 PNMA8BQ9ULN7 279 aaPredicted RBP12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 PCDHB9Q9Y5E1 797 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 RAI2Q9Y5P3 530 aa12.93□□□□□ -0.34
PDLIM2-212ENST00000443561 PLXNB3Q9ULL4 1909 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 POM121BA6NF01 834 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 TM4SF5O14894 197 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 TSPAN6O43657 245 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 PCDH8O95206 1070 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 CPP00450 1065 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 RBP3P10745 1247 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 C6P13671 934 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 NFKB1P19838 968 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 CTSKP43235 329 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 MAPK8P45983 427 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 GRIA4P48058 902 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 GDF10P55107 478 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 RACK1P63244 317 aaKnown RBP12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 SFSWAPQ12872 951 aaKnown RBP12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 XRCC4Q13426 336 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 CNGA3Q16281 694 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 CDKN3Q16667 212 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 KIF19Q2TAC6 998 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 SYCP2LQ5T4T6 812 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 KIAA1161Q6NSJ0 714 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 LIPIQ6XZB0 460 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 RFLNAQ6ZTI6 216 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 SLC13A5Q86YT5 568 aaPredicted RBP12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 KLHDC8BQ8IXV7 354 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 SLC22A18ASQ8N1D0 253 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 C17orf53Q8N3J3 647 aaPredicted RBP12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 UBL4BQ8N7F7 174 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 HTR3CQ8WXA8 447 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 CENPTQ96BT3 561 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 RMDN1Q96DB5 314 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 SERAC1Q96JX3 654 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 CARD9Q9H257 536 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 MBNL1Q9NR56 388 aaKnown RBP12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 SLC6A14Q9UN76 642 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 CHKBQ9Y259 395 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 FNDC3AQ9Y2H6 1198 aaKnown RBP12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 SNX11Q9Y5W9 270 aa12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.92□□□□□ -0.34
PDLIM2-212ENST00000443561 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 A8MX80 341 aa12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 HACD1B0YJ81 288 aa12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 ARHGAP33O14559 1287 aa12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 KCNK3O14649 394 aa12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 ENC1O14682 589 aa12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 KHNYNO15037 678 aaKnown RBP12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 VILLO15195 856 aa12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 PAK4O96013 591 aaPredicted RBP12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 ATP1A1P05023 1023 aaKnown RBP12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 PTMAP06454 111 aaKnown RBP12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 CTPS1P17812 591 aa12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 EIF3EP60228 445 aaKnown RBP12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 OLIG2Q13516 323 aa12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 RPS6KA1Q15418 735 aa12.91□□□□□ -0.34
PDLIM2-212ENST00000443561 OASLQ15646 514 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms