RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 ODF2Q5BJF6 829 aa21.2■□□□□ 0.98
CDKN3-204ENST00000442975 DHRS13Q6UX07 377 aa21.2■□□□□ 0.98
CDKN3-204ENST00000442975 SLC25A45Q8N413 288 aa21.2■□□□□ 0.98
CDKN3-204ENST00000442975 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.2■□□□□ 0.98
CDKN3-204ENST00000442975 TP53I13Q8NBR0 393 aaPredicted RBP21.2■□□□□ 0.98
CDKN3-204ENST00000442975 FAF2Q96CS3 445 aa21.2■□□□□ 0.98
CDKN3-204ENST00000442975 NSMCE3Q96MG7 304 aa21.2■□□□□ 0.98
CDKN3-204ENST00000442975 NUDCD1Q96RS6 583 aa21.2■□□□□ 0.98
CDKN3-204ENST00000442975 HYOU1Q9Y4L1 999 aa21.2■□□□□ 0.98
CDKN3-204ENST00000442975 PCDHGC4Q9Y5F7 938 aa21.2■□□□□ 0.98
CDKN3-204ENST00000442975 PCNX2A6NKB5 2137 aa21.2■□□□□ 0.98
CDKN3-204ENST00000442975 ASPMQ8IZT6 3477 aa21.2■□□□□ 0.98
CDKN3-204ENST00000442975 A8MX80 341 aa21.19■□□□□ 0.98
CDKN3-204ENST00000442975 TRIM38O00635 465 aa21.19■□□□□ 0.98
CDKN3-204ENST00000442975 TRAFD1O14545 582 aaPredicted RBP21.19■□□□□ 0.98
CDKN3-204ENST00000442975 SIGLEC6O43699 453 aa21.19■□□□□ 0.98
CDKN3-204ENST00000442975 SOCS5O75159 536 aa21.19■□□□□ 0.98
CDKN3-204ENST00000442975 NEBLO76041 1014 aa21.19■□□□□ 0.98
CDKN3-204ENST00000442975 MTA2O94776 668 aa21.19■□□□□ 0.98
CDKN3-204ENST00000442975 CPP00450 1065 aa21.19■□□□□ 0.98
CDKN3-204ENST00000442975 NME1P15531 152 aaKnown RBP21.19■□□□□ 0.98
CDKN3-204ENST00000442975 HNRNPKP61978 463 aaKnown RBP eCLIP21.19■□□□□ 0.98
CDKN3-204ENST00000442975 POLR2LP62875 67 aaKnown RBP21.19■□□□□ 0.98
CDKN3-204ENST00000442975 ITKQ08881 620 aa21.19■□□□□ 0.98
CDKN3-204ENST00000442975 LRRC49Q8IUZ0 686 aa21.19■□□□□ 0.98
CDKN3-204ENST00000442975 PQLC3Q8N755 202 aa21.19■□□□□ 0.98
CDKN3-204ENST00000442975 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.19■□□□□ 0.98
CDKN3-204ENST00000442975 LRRN4Q8WUT4 740 aa21.19■□□□□ 0.98
CDKN3-204ENST00000442975 GATA6Q92908 595 aa21.19■□□□□ 0.98
CDKN3-204ENST00000442975 IFT43Q96FT9 208 aa21.19■□□□□ 0.98
CDKN3-204ENST00000442975 ZNF830Q96NB3 372 aaPredicted RBP21.19■□□□□ 0.98
CDKN3-204ENST00000442975 INTUQ9ULD6 942 aa21.19■□□□□ 0.98
CDKN3-204ENST00000442975 SPOPO43791 374 aa21.18■□□□□ 0.98
CDKN3-204ENST00000442975 RFPL3O75679 317 aa21.18■□□□□ 0.98
CDKN3-204ENST00000442975 DKK1O94907 266 aa21.18■□□□□ 0.98
CDKN3-204ENST00000442975 CSF2P04141 144 aa21.18■□□□□ 0.98
CDKN3-204ENST00000442975 ALPPL2P10696 532 aa21.18■□□□□ 0.98
CDKN3-204ENST00000442975 CR2P20023 1033 aa21.18■□□□□ 0.98
CDKN3-204ENST00000442975 KDELR1P24390 212 aa21.18■□□□□ 0.98
CDKN3-204ENST00000442975 MAGEA1P43355 309 aa21.18■□□□□ 0.98
CDKN3-204ENST00000442975 NOP2P46087 812 aaKnown RBP21.18■□□□□ 0.98
CDKN3-204ENST00000442975 ACADVLP49748 655 aa21.18■□□□□ 0.98
CDKN3-204ENST00000442975 TRAF2Q12933 501 aa21.18■□□□□ 0.98
CDKN3-204ENST00000442975 RALGDSQ12967 914 aa21.18■□□□□ 0.98
CDKN3-204ENST00000442975 WSCD2Q2TBF2 565 aa21.18■□□□□ 0.98
CDKN3-204ENST00000442975 TIGD7Q6NT04 549 aaPredicted RBP21.18■□□□□ 0.98
CDKN3-204ENST00000442975 DPPA4Q7L190 304 aa21.18■□□□□ 0.98
CDKN3-204ENST00000442975 ZNF548Q8NEK5 533 aaPredicted RBP21.18■□□□□ 0.98
CDKN3-204ENST00000442975 PROS1P07225 676 aa21.17■□□□□ 0.98
CDKN3-204ENST00000442975 JUNDP17535 347 aa21.17■□□□□ 0.98
CDKN3-204ENST00000442975 MX2P20592 715 aa21.17■□□□□ 0.98
CDKN3-204ENST00000442975 DAB2P98082 770 aa21.17■□□□□ 0.98
CDKN3-204ENST00000442975 PTK2BQ14289 1009 aa21.17■□□□□ 0.98
CDKN3-204ENST00000442975 SPA17Q15506 151 aa21.17■□□□□ 0.98
CDKN3-204ENST00000442975 IFI16Q16666 785 aaKnown RBP21.17■□□□□ 0.98
CDKN3-204ENST00000442975 MARCH9Q86YJ5 346 aa21.17■□□□□ 0.98
CDKN3-204ENST00000442975 RBFAQ8N0V3 343 aa21.17■□□□□ 0.98
CDKN3-204ENST00000442975 CCNYQ8ND76 341 aa21.17■□□□□ 0.98
CDKN3-204ENST00000442975 OR4C6Q8NH72 309 aa21.17■□□□□ 0.98
CDKN3-204ENST00000442975 MRFAP1L1Q96HT8 127 aa21.17■□□□□ 0.98
CDKN3-204ENST00000442975 SEMA3CQ99985 751 aa21.17■□□□□ 0.98
CDKN3-204ENST00000442975 TMEM121BQ9BXQ6 578 aaPredicted RBP21.17■□□□□ 0.98
CDKN3-204ENST00000442975 POLR1EQ9GZS1 481 aaKnown RBP21.17■□□□□ 0.98
CDKN3-204ENST00000442975 B4GALT6Q9UBX8 382 aa21.17■□□□□ 0.98
CDKN3-204ENST00000442975 IGF2RP11717 2491 aa21.17■□□□□ 0.98
CDKN3-204ENST00000442975 MAP1BP46821 2468 aaKnown RBP21.17■□□□□ 0.98
CDKN3-204ENST00000442975 TP53BP1Q12888 1972 aaPredicted RBP21.16■□□□□ 0.98
CDKN3-204ENST00000442975 FAM149AA5PLN7 773 aa21.16■□□□□ 0.98
CDKN3-204ENST00000442975 HTRA2O43464 458 aaPredicted RBP21.16■□□□□ 0.98
CDKN3-204ENST00000442975 CKMT2P17540 419 aa21.16■□□□□ 0.98
CDKN3-204ENST00000442975 COMTP21964 271 aa21.16■□□□□ 0.98
CDKN3-204ENST00000442975 EIF2B5Q13144 721 aaKnown RBP21.16■□□□□ 0.98
CDKN3-204ENST00000442975 ZNF211Q13398 564 aaPredicted RBP21.16■□□□□ 0.98
CDKN3-204ENST00000442975 MACC1Q6ZN28 852 aa21.16■□□□□ 0.98
CDKN3-204ENST00000442975 RHOT1Q8IXI2 618 aa21.16■□□□□ 0.98
CDKN3-204ENST00000442975 LMX1AQ8TE12 382 aa21.16■□□□□ 0.98
CDKN3-204ENST00000442975 ZCCHC14Q8WYQ9 949 aaKnown RBP21.16■□□□□ 0.98
CDKN3-204ENST00000442975 RNF157Q96PX1 679 aa21.16■□□□□ 0.98
CDKN3-204ENST00000442975 HAUS2Q9NVX0 235 aa21.16■□□□□ 0.98
CDKN3-204ENST00000442975 DTLQ9NZJ0 730 aa21.16■□□□□ 0.98
CDKN3-204ENST00000442975 APOBEC3BQ9UH17 382 aaKnown RBP21.16■□□□□ 0.98
CDKN3-204ENST00000442975 KLF15Q9UIH9 416 aa21.16■□□□□ 0.98
CDKN3-204ENST00000442975 TFR2Q9UP52 801 aa21.16■□□□□ 0.98
CDKN3-204ENST00000442975 OR1A2Q9Y585 309 aa21.16■□□□□ 0.98
CDKN3-204ENST00000442975 PCDHGA1Q9Y5H4 931 aa21.16■□□□□ 0.98
CDKN3-204ENST00000442975 HEY1Q9Y5J3 304 aa21.16■□□□□ 0.98
CDKN3-204ENST00000442975 A0A1W2PQ67 120 aa21.15■□□□□ 0.98
CDKN3-204ENST00000442975 NEMP2A6NFY4 417 aa21.15■□□□□ 0.98
CDKN3-204ENST00000442975 APOL1O14791 398 aa21.15■□□□□ 0.98
CDKN3-204ENST00000442975 MATN3O15232 486 aa21.15■□□□□ 0.98
CDKN3-204ENST00000442975 RECQL5O94762 991 aaPredicted RBP21.15■□□□□ 0.98
CDKN3-204ENST00000442975 CYLC1P35663 651 aaPredicted RBP21.15■□□□□ 0.98
CDKN3-204ENST00000442975 SLC1A1P43005 524 aa21.15■□□□□ 0.98
CDKN3-204ENST00000442975 CLDN6P56747 220 aa21.15■□□□□ 0.98
CDKN3-204ENST00000442975 YPEL5P62699 121 aa21.15■□□□□ 0.98
CDKN3-204ENST00000442975 DYNLT1P63172 113 aa21.15■□□□□ 0.98
CDKN3-204ENST00000442975 ACOX1Q15067 660 aa21.15■□□□□ 0.98
CDKN3-204ENST00000442975 PROX2Q3B8N5 592 aa21.15■□□□□ 0.98
CDKN3-204ENST00000442975 RALGPS1Q5JS13 557 aa21.15■□□□□ 0.98
CDKN3-204ENST00000442975 ARMC12Q5T9G4 340 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms