RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 ECT2Q9H8V3 914 aa19.21■□□□□ 0.67
SNX17-203ENST00000440760 OBP2AQ9NY56 170 aa19.21■□□□□ 0.67
SNX17-203ENST00000440760 ACTL7BQ9Y614 415 aa19.21■□□□□ 0.67
SNX17-203ENST00000440760 PRUNE2Q8WUY3 3088 aa19.2■□□□□ 0.66
SNX17-203ENST00000440760 MROH6A6NGR9 719 aa19.2■□□□□ 0.66
SNX17-203ENST00000440760 KRT37O76014 449 aa19.2■□□□□ 0.66
SNX17-203ENST00000440760 SNRPAP09012 282 aaKnown RBP19.2■□□□□ 0.66
SNX17-203ENST00000440760 MDH1P40925 334 aaKnown RBP19.2■□□□□ 0.66
SNX17-203ENST00000440760 SLC20A2Q08357 652 aa19.2■□□□□ 0.66
SNX17-203ENST00000440760 NAB1Q13506 487 aa19.2■□□□□ 0.66
SNX17-203ENST00000440760 LRRC14Q15048 493 aa19.2■□□□□ 0.66
SNX17-203ENST00000440760 DLG2Q15700 870 aa19.2■□□□□ 0.66
SNX17-203ENST00000440760 QPCTQ16769 361 aa19.2■□□□□ 0.66
SNX17-203ENST00000440760 KIAA0930Q6ICG6 404 aaPredicted RBP19.2■□□□□ 0.66
SNX17-203ENST00000440760 STRA8Q7Z7C7 330 aa19.2■□□□□ 0.66
SNX17-203ENST00000440760 DENND6AQ8IWF6 608 aa19.2■□□□□ 0.66
SNX17-203ENST00000440760 SFTPA1Q8IWL2 248 aa19.2■□□□□ 0.66
SNX17-203ENST00000440760 OR13C4Q8NGS5 318 aa19.2■□□□□ 0.66
SNX17-203ENST00000440760 VOPP1Q96AW1 172 aa19.2■□□□□ 0.66
SNX17-203ENST00000440760 DNAJC1Q96KC8 554 aaKnown RBP19.2■□□□□ 0.66
SNX17-203ENST00000440760 RPP25Q9BUL9 199 aaKnown RBP19.2■□□□□ 0.66
SNX17-203ENST00000440760 GTSE1Q9NYZ3 720 aa19.2■□□□□ 0.66
SNX17-203ENST00000440760 LMCD1Q9NZU5 365 aa19.2■□□□□ 0.66
SNX17-203ENST00000440760 TXNDC16Q9P2K2 825 aa19.2■□□□□ 0.66
SNX17-203ENST00000440760 ERVW-1Q9UQF0 538 aa19.2■□□□□ 0.66
SNX17-203ENST00000440760 ARIH1Q9Y4X5 557 aaPredicted RBP19.2■□□□□ 0.66
SNX17-203ENST00000440760 OR51F1A6NGY5 319 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 MT-ND3P03897 115 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 LAMP2P13473 410 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 ALADP13716 330 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 FCHO2Q0JRZ9 810 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 DMC1Q14565 340 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 LRIT3Q3SXY7 679 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 ZNF449Q6P9G9 518 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 KIAA1958Q8N8K9 716 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 MDGA1Q8NFP4 955 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 NXPE3Q969Y0 559 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 MSLNLQ96KJ4 702 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 MRGPRX3Q96LB0 322 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 RIPOR3Q96MK2 946 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 MTG2Q9H4K7 406 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 CNOT10Q9H9A5 744 aaKnown RBP19.19■□□□□ 0.66
SNX17-203ENST00000440760 THG1LQ9NWX6 298 aaKnown RBP19.19■□□□□ 0.66
SNX17-203ENST00000440760 FZD6O60353 706 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 KRT38O76015 456 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 PYGBP11216 843 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 CTPS1P17812 591 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 GP5P40197 560 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 MPP1Q00013 466 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 SULT2A1Q06520 285 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 BCL2L1Q07817 233 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 TERF2Q15554 542 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 GLT6D1Q7Z4J2 308 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 METTL3Q86U44 580 aaKnown RBP19.19■□□□□ 0.66
SNX17-203ENST00000440760 MFSD6LQ8IWD5 586 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 ZNF366Q8N895 744 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 CHST14Q8NCH0 376 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 CPNE1Q99829 537 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 ADGRE3Q9BY15 652 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 C12orf65Q9H3J6 166 aaKnown RBP19.19■□□□□ 0.66
SNX17-203ENST00000440760 ZDHHC6Q9H6R6 413 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 SUDS3Q9H7L9 328 aaPredicted RBP19.19■□□□□ 0.66
SNX17-203ENST00000440760 SENP1Q9P0U3 644 aa19.19■□□□□ 0.66
SNX17-203ENST00000440760 HECAQ9UBI9 543 aaPredicted RBP19.19■□□□□ 0.66
SNX17-203ENST00000440760 TTC34A8MYJ7 566 aa19.18■□□□□ 0.66
SNX17-203ENST00000440760 ANKRD66B4E2M5 251 aa19.18■□□□□ 0.66
SNX17-203ENST00000440760 TRAFD1O14545 582 aaPredicted RBP19.18■□□□□ 0.66
SNX17-203ENST00000440760 PGLSO95336 258 aa19.18■□□□□ 0.66
SNX17-203ENST00000440760 ALPIP09923 528 aa19.18■□□□□ 0.66
SNX17-203ENST00000440760 PAMP19021 973 aa19.18■□□□□ 0.66
SNX17-203ENST00000440760 ABL2P42684 1182 aa19.18■□□□□ 0.66
SNX17-203ENST00000440760 SLC1A2P43004 574 aa19.18■□□□□ 0.66
SNX17-203ENST00000440760 SERPINB9P50453 376 aa19.18■□□□□ 0.66
SNX17-203ENST00000440760 CCNHP51946 323 aaPredicted RBP19.18■□□□□ 0.66
SNX17-203ENST00000440760 EPHB1P54762 984 aa19.18■□□□□ 0.66
SNX17-203ENST00000440760 SNRPD1P62314 119 aaKnown RBP19.18■□□□□ 0.66
SNX17-203ENST00000440760 CTBP1Q13363 440 aa19.18■□□□□ 0.66
SNX17-203ENST00000440760 PDGFRLQ15198 375 aa19.18■□□□□ 0.66
SNX17-203ENST00000440760 RALGPS1Q5JS13 557 aa19.18■□□□□ 0.66
SNX17-203ENST00000440760 ARMC12Q5T9G4 340 aa19.18■□□□□ 0.66
SNX17-203ENST00000440760 ZNF470Q6ECI4 717 aa19.18■□□□□ 0.66
SNX17-203ENST00000440760 DPY19L3Q6ZPD9 716 aa19.18■□□□□ 0.66
SNX17-203ENST00000440760 ZSWIM9Q86XI8 627 aa19.18■□□□□ 0.66
SNX17-203ENST00000440760 YAF2Q8IY57 180 aa19.18■□□□□ 0.66
SNX17-203ENST00000440760 PAF1Q8N7H5 531 aa19.18■□□□□ 0.66
SNX17-203ENST00000440760 BRSK1Q8TDC3 778 aa19.18■□□□□ 0.66
SNX17-203ENST00000440760 RBBP8Q99708 897 aa19.18■□□□□ 0.66
SNX17-203ENST00000440760 COLQQ9Y215 455 aaPredicted RBP19.18■□□□□ 0.66
SNX17-203ENST00000440760 MUC22E2RYF6 1773 aaPredicted RBP19.17■□□□□ 0.66
SNX17-203ENST00000440760 PRRT4C9JH25 899 aa19.17■□□□□ 0.66
SNX17-203ENST00000440760 RFPL1O75677 317 aa19.17■□□□□ 0.66
SNX17-203ENST00000440760 ITGA2BP08514 1039 aa19.17■□□□□ 0.66
SNX17-203ENST00000440760 CA4P22748 312 aa19.17■□□□□ 0.66
SNX17-203ENST00000440760 GABPB1Q06547 395 aaPredicted RBP19.17■□□□□ 0.66
SNX17-203ENST00000440760 PTPRNQ16849 979 aa19.17■□□□□ 0.66
SNX17-203ENST00000440760 ATXN2LQ8WWM7 1075 aaKnown RBP19.17■□□□□ 0.66
SNX17-203ENST00000440760 HDAC10Q969S8 669 aa19.17■□□□□ 0.66
SNX17-203ENST00000440760 ISG20Q96AZ6 181 aaKnown RBP19.17■□□□□ 0.66
SNX17-203ENST00000440760 RABEP2Q9H5N1 569 aa19.17■□□□□ 0.66
SNX17-203ENST00000440760 ATP13A3Q9H7F0 1226 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms