RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 ANTXRLA6NF34 631 aa28.12■■■□□ 2.09
CGREF1-207ENST00000440612 FOXO6A8MYZ6 492 aa28.12■■■□□ 2.09
CGREF1-207ENST00000440612 HMGB1P1B2RPK0 211 aaPredicted RBP28.12■■■□□ 2.09
CGREF1-207ENST00000440612 WASH3PC4AMC7 463 aa28.12■■■□□ 2.09
CGREF1-207ENST00000440612 SOCS5O75159 536 aa28.12■■■□□ 2.09
CGREF1-207ENST00000440612 ERVK-10P10266 1014 aa28.12■■■□□ 2.09
CGREF1-207ENST00000440612 SLC8A1P32418 973 aa28.12■■■□□ 2.09
CGREF1-207ENST00000440612 ARCN1P48444 511 aaKnown RBP28.12■■■□□ 2.09
CGREF1-207ENST00000440612 PTPRRQ15256 657 aa28.12■■■□□ 2.09
CGREF1-207ENST00000440612 LRRC6Q86X45 466 aa28.12■■■□□ 2.09
CGREF1-207ENST00000440612 ZSWIM9Q86XI8 627 aa28.12■■■□□ 2.09
CGREF1-207ENST00000440612 RIBC1Q8N443 379 aaPredicted RBP28.12■■■□□ 2.09
CGREF1-207ENST00000440612 CPEB1Q9BZB8 566 aaKnown RBP28.12■■■□□ 2.09
CGREF1-207ENST00000440612 MTG2Q9H4K7 406 aa28.12■■■□□ 2.09
CGREF1-207ENST00000440612 FBRSL1Q9HCM7 1045 aaKnown RBP28.12■■■□□ 2.09
CGREF1-207ENST00000440612 BCCIPQ9P287 314 aaKnown RBP eCLIP28.12■■■□□ 2.09
CGREF1-207ENST00000440612 TBK1Q9UHD2 729 aa28.12■■■□□ 2.09
CGREF1-207ENST00000440612 NOVA2Q9UNW9 492 aaKnown RBP28.12■■■□□ 2.09
CGREF1-207ENST00000440612 KCTD3Q9Y597 815 aa28.12■■■□□ 2.09
CGREF1-207ENST00000440612 SOX9P48436 509 aa28.11■■■□□ 2.09
CGREF1-207ENST00000440612 BCL2L1Q07817 233 aa28.11■■■□□ 2.09
CGREF1-207ENST00000440612 MGAT5Q09328 741 aa28.11■■■□□ 2.09
CGREF1-207ENST00000440612 SEPT6Q14141 434 aa28.11■■■□□ 2.09
CGREF1-207ENST00000440612 TSTD2Q5T7W7 516 aa28.11■■■□□ 2.09
CGREF1-207ENST00000440612 GPR153Q6NV75 609 aa28.11■■■□□ 2.09
CGREF1-207ENST00000440612 MICALCLQ6ZW33 695 aa28.11■■■□□ 2.09
CGREF1-207ENST00000440612 PPM1NQ8N819 430 aa28.11■■■□□ 2.09
CGREF1-207ENST00000440612 OR13J1Q8NGT2 312 aa28.11■■■□□ 2.09
CGREF1-207ENST00000440612 BRSK1Q8TDC3 778 aa28.11■■■□□ 2.09
CGREF1-207ENST00000440612 RMDN1Q96DB5 314 aa28.11■■■□□ 2.09
CGREF1-207ENST00000440612 ECHDC3Q96DC8 303 aa28.11■■■□□ 2.09
CGREF1-207ENST00000440612 TUBGCP5Q96RT8 1024 aa28.11■■■□□ 2.09
CGREF1-207ENST00000440612 ADGRE3Q9BY15 652 aa28.11■■■□□ 2.09
CGREF1-207ENST00000440612 ATP13A3Q9H7F0 1226 aa28.11■■■□□ 2.09
CGREF1-207ENST00000440612 BRD9Q9H8M2 597 aa28.11■■■□□ 2.09
CGREF1-207ENST00000440612 PSMC3IPQ9P2W1 217 aaPredicted RBP28.11■■■□□ 2.09
CGREF1-207ENST00000440612 BPTFQ12830 3046 aa28.11■■■□□ 2.09
CGREF1-207ENST00000440612 AURKAO14965 403 aa28.1■■■□□ 2.09
CGREF1-207ENST00000440612 TIMM44O43615 452 aa28.1■■■□□ 2.09
CGREF1-207ENST00000440612 FAM155BO75949 473 aa28.1■■■□□ 2.09
CGREF1-207ENST00000440612 PAPSS2O95340 614 aaPredicted RBP28.1■■■□□ 2.09
CGREF1-207ENST00000440612 SMAD1Q15797 465 aaKnown RBP28.1■■■□□ 2.09
CGREF1-207ENST00000440612 CNGA3Q16281 694 aa28.1■■■□□ 2.09
CGREF1-207ENST00000440612 ARMC12Q5T9G4 340 aa28.1■■■□□ 2.09
CGREF1-207ENST00000440612 BLOC1S5Q8TDH9 187 aa28.1■■■□□ 2.09
CGREF1-207ENST00000440612 MZB1Q8WU39 189 aa28.1■■■□□ 2.09
CGREF1-207ENST00000440612 PDCD6IPQ8WUM4 868 aaKnown RBP28.1■■■□□ 2.09
CGREF1-207ENST00000440612 PTPRN2Q92932 1015 aa28.1■■■□□ 2.09
CGREF1-207ENST00000440612 POP4O95707 220 aaKnown RBP28.1■■■□□ 2.09
CGREF1-207ENST00000440612 CA4P22748 312 aa28.1■■■□□ 2.09
CGREF1-207ENST00000440612 MSH2P43246 934 aa28.1■■■□□ 2.09
CGREF1-207ENST00000440612 MARK2Q7KZI7 788 aaKnown RBP28.1■■■□□ 2.09
CGREF1-207ENST00000440612 CTAGE3PQ8IX95 158 aa28.1■■■□□ 2.09
CGREF1-207ENST00000440612 RYBPQ8N488 228 aaPredicted RBP28.1■■■□□ 2.09
CGREF1-207ENST00000440612 KDM1BQ8NB78 822 aa28.1■■■□□ 2.09
CGREF1-207ENST00000440612 MDGA1Q8NFP4 955 aa28.1■■■□□ 2.09
CGREF1-207ENST00000440612 ARL5AQ9Y689 179 aa28.1■■■□□ 2.09
CGREF1-207ENST00000440612 BNIP3LO60238 219 aa28.09■■■□□ 2.09
CGREF1-207ENST00000440612 KAT7O95251 611 aa28.09■■■□□ 2.09
CGREF1-207ENST00000440612 ACVR1Q04771 509 aa28.09■■■□□ 2.09
CGREF1-207ENST00000440612 KIAA0930Q6ICG6 404 aaPredicted RBP28.09■■■□□ 2.09
CGREF1-207ENST00000440612 SLC26A11Q86WA9 606 aa28.09■■■□□ 2.09
CGREF1-207ENST00000440612 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP28.09■■■□□ 2.09
CGREF1-207ENST00000440612 PSAT1Q9Y617 370 aa28.09■■■□□ 2.09
CGREF1-207ENST00000440612 PALM2-AKAP2B1ALY0 433 aaPredicted RBP28.08■■■□□ 2.09
CGREF1-207ENST00000440612 COL4A2P08572 1712 aa28.08■■■□□ 2.09
CGREF1-207ENST00000440612 PSMA3P25788 255 aa28.08■■■□□ 2.09
CGREF1-207ENST00000440612 NNMTP40261 264 aa28.08■■■□□ 2.09
CGREF1-207ENST00000440612 GRIA4P48058 902 aa28.08■■■□□ 2.09
CGREF1-207ENST00000440612 RPL26P61254 145 aaKnown RBP28.08■■■□□ 2.09
CGREF1-207ENST00000440612 MAGOHP61326 146 aaKnown RBP28.08■■■□□ 2.09
CGREF1-207ENST00000440612 ZNF366Q8N895 744 aa28.08■■■□□ 2.09
CGREF1-207ENST00000440612 SPOCK2Q92563 424 aa28.08■■■□□ 2.09
CGREF1-207ENST00000440612 KCNK12Q9HB15 430 aa28.08■■■□□ 2.09
CGREF1-207ENST00000440612 ZNF180Q9UJW8 692 aa28.08■■■□□ 2.09
CGREF1-207ENST00000440612 RPL26L1Q9UNX3 145 aaKnown RBP28.08■■■□□ 2.09
CGREF1-207ENST00000440612 WASF2Q9Y6W5 498 aa28.08■■■□□ 2.09
CGREF1-207ENST00000440612 TBC1D3BA6NDS4 549 aa28.07■■■□□ 2.08
CGREF1-207ENST00000440612 SERPINA4P29622 427 aa28.07■■■□□ 2.08
CGREF1-207ENST00000440612 GRIA2P42262 883 aa28.07■■■□□ 2.08
CGREF1-207ENST00000440612 ARSDP51689 593 aa28.07■■■□□ 2.08
CGREF1-207ENST00000440612 PTPRCAPQ14761 206 aa28.07■■■□□ 2.08
CGREF1-207ENST00000440612 TMED2Q15363 201 aa28.07■■■□□ 2.08
CGREF1-207ENST00000440612 SKIV2LQ15477 1246 aaKnown RBP28.07■■■□□ 2.08
CGREF1-207ENST00000440612 HSP90AA5PQ58FG0 334 aa28.07■■■□□ 2.08
CGREF1-207ENST00000440612 TEDDM1Q5T9Z0 273 aa28.07■■■□□ 2.08
CGREF1-207ENST00000440612 EXOC3L1Q86VI1 746 aa28.07■■■□□ 2.08
CGREF1-207ENST00000440612 KCNMB4Q86W47 210 aa28.07■■■□□ 2.08
CGREF1-207ENST00000440612 PPM1EQ8WY54 764 aa28.07■■■□□ 2.08
CGREF1-207ENST00000440612 AGAP2Q99490 1192 aa28.07■■■□□ 2.08
CGREF1-207ENST00000440612 PHF7Q9BWX1 381 aaPredicted RBP28.07■■■□□ 2.08
CGREF1-207ENST00000440612 TMEM245Q9H330 911 aa28.07■■■□□ 2.08
CGREF1-207ENST00000440612 SUV39H2Q9H5I1 410 aa28.07■■■□□ 2.08
CGREF1-207ENST00000440612 ZDHHC6Q9H6R6 413 aa28.07■■■□□ 2.08
CGREF1-207ENST00000440612 PPANQ9NQ55 473 aaKnown RBP28.07■■■□□ 2.08
CGREF1-207ENST00000440612 C20orf96Q9NUD7 363 aaPredicted RBP28.07■■■□□ 2.08
CGREF1-207ENST00000440612 RIMKLBQ9ULI2 386 aa28.07■■■□□ 2.08
CGREF1-207ENST00000440612 PLA2G4CQ9UP65 541 aa28.07■■■□□ 2.08
CGREF1-207ENST00000440612 HMX2A2RU54 273 aa28.07■■■□□ 2.08
CGREF1-207ENST00000440612 VAPBO95292 243 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms