RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 GLCCI1Q86VQ1 547 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 SFR1Q86XK3 245 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 NELFCDQ8IXH7 590 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 SPARTQ8N0X7 666 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 GALNT16Q8N428 558 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 SIRT6Q8N6T7 355 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 NAXEQ8NCW5 288 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 MSANTD4Q8NCY6 345 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 PRSS3P2Q8NHM4 247 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 CYP2W1Q8TAV3 490 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 PIGOQ8TEQ8 1089 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 SCFD1Q8WVM8 642 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 SECISBP2LQ93073 1101 aaKnown RBP3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 R3HDM4Q96D70 268 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 RSPRY1Q96DX4 576 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 ZBED3Q96IU2 234 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 RPGRIP1Q96KN7 1286 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 UBXN10Q96LJ8 280 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 ZNF778Q96MU6 729 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 SNX18Q96RF0 628 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 HSD17B14Q9BPX1 270 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 REEP2Q9BRK0 252 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 FGFBP2Q9BYJ0 223 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 TMEM39BQ9GZU3 492 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 DEFB129Q9H1M3 183 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 OBP2BQ9NPH6 170 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 SNX15Q9NRS6 342 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 FAM207AQ9NSI2 230 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 ZNF446Q9NWS9 450 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 TUBA8Q9NY65 449 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 SLC39A10Q9ULF5 831 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 TRAF3IP3Q9Y228 551 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 RABGAP1Q9Y3P9 1069 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 SAR1BQ9Y6B6 198 aa3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 GREB1LQ9C091 1923 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P11-201ENST00000440127 MACROD2A1Z1Q3 448 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 ZNF263O14978 683 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 EPHB6O15197 1021 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 EIF3DO15371 548 aaKnown RBP eCLIP3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 TBC1D4O60343 1298 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 NOL4O94818 638 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 SEC31AO94979 1220 aaKnown RBP3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 GCNT3O95395 438 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 AFPP02771 609 aaKnown RBP3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 ATP1A1P05023 1023 aaKnown RBP3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 ICAM1P05362 532 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 PYGLP06737 847 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 ANXA2P07355 339 aaKnown RBP3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 ASNSP08243 561 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 PDHA1P08559 390 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 PLEKP08567 350 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 PNMA6AP0CW24 399 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 ARP10275 920 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 EPB41P11171 864 aaKnown RBP3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 PRLRP16471 622 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 HDCP19113 662 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 TNFAIP3P21580 790 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 NR2F2P24468 414 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 HOXD13P35453 343 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 SERPINF1P36955 418 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 EPS15P42566 896 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 CASP2P42575 452 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 SLC11A2P49281 568 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 ITGA8P53708 1063 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 UCP3P55916 312 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 POLR2FP61218 127 aaKnown RBP3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 UBXN2AP68543 259 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 SSBP2P81877 361 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 SETQ01105 290 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 CYP4A11Q02928 519 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 TFF2Q03403 129 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 CXCL9Q07325 125 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 MYO1EQ12965 1108 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 LAMB3Q13751 1172 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 TNFAIP1Q13829 316 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 CTTNQ14247 550 aaKnown RBP3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 ASIC2Q16515 512 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 ASTE1Q2TB18 679 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 C10orf76Q5T2E6 689 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 INTS11Q5TA45 600 aaKnown RBP3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 SLC18B1Q6NT16 456 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 JMJD6Q6NYC1 403 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 NAPRTQ6XQN6 538 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 CATSPERGQ6ZRH7 1159 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 RFX8Q6ZV50 586 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 STXBP4Q6ZWJ1 553 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 C1orf186Q6ZWK4 172 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 SFTPA1Q8IWL2 248 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 RNF10Q8N5U6 811 aaKnown RBP3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 ATG16L2Q8NAA4 619 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 TRIM58Q8NG06 486 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 LPAR1Q92633 364 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 ZNF566Q969W8 418 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 REPS1Q96D71 796 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 HMCESQ96FZ2 354 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 SNX22Q96L94 193 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 ALS2CR12Q96Q35 445 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 MMS19Q96T76 1030 aa3.63□□□□□ -1.83
HMGB3P11-201ENST00000440127 RIT2Q99578 217 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms