RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 ZSCAN9O15535 394 aaPredicted RBP14.26□□□□□ -0.13
LIMD1-202ENST00000440097 TIMM44O43615 452 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 BPGMP07738 259 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 CHN2P52757 468 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 EPHB1P54762 984 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 CTBP1Q13363 440 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 CCNIQ14094 377 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 ZNF235Q14590 738 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 RALGPS1Q5JS13 557 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 FBXL19Q6PCT2 694 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 VPS39Q96JC1 886 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 CDK5RAP1Q96SZ6 601 aaKnown RBP14.26□□□□□ -0.13
LIMD1-202ENST00000440097 C20orf27Q9GZN8 174 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 GKN1Q9NS71 199 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 ZNF358Q9NW07 568 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 RHBDL2Q9NX52 303 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 SLC2A6Q9UGQ3 507 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 AFF4Q9UHB7 1163 aaKnown RBP14.26□□□□□ -0.13
LIMD1-202ENST00000440097 IGLV3-10A0A075B6K4 115 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 A0A096LPK6 155 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 PDE5AO76074 875 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 PAMP19021 973 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 PGGT1BP53609 377 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 DEFB103AP81534 67 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 VEPH1Q14D04 833 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 TBCCQ15814 346 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 POTEHQ6S545 545 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 UGT2A3Q6UWM9 527 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 CRLF3Q8IUI8 442 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 RBM12BQ8IXT5 1001 aaKnown RBP14.26□□□□□ -0.13
LIMD1-202ENST00000440097 HIPK4Q8NE63 616 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 PDZD8Q8NEN9 1154 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 TOX2Q96NM4 488 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 COMMD8Q9NX08 183 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 SMPD4Q9NXE4 827 aa14.26□□□□□ -0.13
LIMD1-202ENST00000440097 HBS1LQ9Y450 684 aaKnown RBP14.26□□□□□ -0.13
LIMD1-202ENST00000440097 ZNF840PA6NDX5 716 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 COCHO43405 550 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 ACSL4O60488 711 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 PFDN1O60925 122 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 TMCC1O94876 653 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 IGLV3-27P01718 113 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 URODP06132 367 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 SERPINA6P08185 405 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 ZDHHC11BP0C7U3 371 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 LBX1P52954 281 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 STX3Q13277 289 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 TRIP10Q15642 601 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 PARP15Q460N3 678 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 DENND5AQ6IQ26 1287 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 ISLR2Q6UXK2 745 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 DENND6AQ8IWF6 608 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 TNS4Q8IZW8 715 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 POU5F2Q8N7G0 328 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 TMEM216Q9P0N5 145 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 UXTQ9UBK9 157 aaPredicted RBP14.25□□□□□ -0.13
LIMD1-202ENST00000440097 BACE2Q9Y5Z0 518 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 ZFP37Q9Y6Q3 630 aaPredicted RBP14.25□□□□□ -0.13
LIMD1-202ENST00000440097 MYO7AQ13402 2215 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 A0A0D9SEW6 157 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 VILLO15195 856 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 SOD2P04179 222 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 CLTBP09497 229 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 SMIM18P0DKX4 95 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 AVPR1AP37288 418 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 RPS24P62847 133 aaKnown RBP14.25□□□□□ -0.13
LIMD1-202ENST00000440097 USP10Q14694 798 aaKnown RBP14.25□□□□□ -0.13
LIMD1-202ENST00000440097 RBM44Q6ZP01 1051 aaKnown RBP14.25□□□□□ -0.13
LIMD1-202ENST00000440097 CCDC124Q96CT7 223 aaKnown RBP14.25□□□□□ -0.13
LIMD1-202ENST00000440097 DGCR14Q96DF8 476 aaKnown RBP14.25□□□□□ -0.13
LIMD1-202ENST00000440097 TTLL2Q9BWV7 592 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 TRPC7Q9HCX4 862 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 PTTG2Q9NZH5 202 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 SIRPGQ9P1W8 387 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 TLK1Q9UKI8 766 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 TBX21Q9UL17 535 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 TCAF1Q9Y4C2 921 aa14.25□□□□□ -0.13
LIMD1-202ENST00000440097 C15orf38-AP3S2A0A0A6YYH1 394 aa14.24□□□□□ -0.13
LIMD1-202ENST00000440097 TSPAN3O60637 253 aa14.24□□□□□ -0.13
LIMD1-202ENST00000440097 PLIN3O60664 434 aa14.24□□□□□ -0.13
LIMD1-202ENST00000440097 PEX11BO96011 259 aa14.24□□□□□ -0.13
LIMD1-202ENST00000440097 CSF2RAP15509 400 aa14.24□□□□□ -0.13
LIMD1-202ENST00000440097 CORO1AP31146 461 aaKnown RBP14.24□□□□□ -0.13
LIMD1-202ENST00000440097 SLC6A4P31645 630 aa14.24□□□□□ -0.13
LIMD1-202ENST00000440097 SERINC3Q13530 473 aa14.24□□□□□ -0.13
LIMD1-202ENST00000440097 ZNF470Q6ECI4 717 aa14.24□□□□□ -0.13
LIMD1-202ENST00000440097 RANBP10Q6VN20 620 aa14.24□□□□□ -0.13
LIMD1-202ENST00000440097 ARPINQ7Z6K5 226 aa14.24□□□□□ -0.13
LIMD1-202ENST00000440097 ACVR1CQ8NER5 493 aa14.24□□□□□ -0.13
LIMD1-202ENST00000440097 TOP1MTQ969P6 601 aa14.24□□□□□ -0.13
LIMD1-202ENST00000440097 IMP4Q96G21 291 aaKnown RBP14.24□□□□□ -0.13
LIMD1-202ENST00000440097 TSNARE1Q96NA8 513 aa14.24□□□□□ -0.13
LIMD1-202ENST00000440097 SEMA3CQ99985 751 aa14.24□□□□□ -0.13
LIMD1-202ENST00000440097 EPB41L1Q9H4G0 881 aa14.24□□□□□ -0.13
LIMD1-202ENST00000440097 NDUFA13Q9P0J0 144 aa14.24□□□□□ -0.13
LIMD1-202ENST00000440097 YIPF1Q9Y548 306 aa14.24□□□□□ -0.13
LIMD1-202ENST00000440097 MICAL3Q7RTP6 2002 aa14.24□□□□□ -0.13
LIMD1-202ENST00000440097 DRGXA6NNA5 263 aa14.24□□□□□ -0.13
LIMD1-202ENST00000440097 GJB3O75712 270 aa14.24□□□□□ -0.13
LIMD1-202ENST00000440097 ACRP10323 421 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms