RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 PEX5P50542 639 aa10.54□□□□□ -0.72
MCF2L-216ENST00000439475 MAXP61244 160 aa10.54□□□□□ -0.72
MCF2L-216ENST00000439475 HNRNPKP61978 463 aaKnown RBP eCLIP10.54□□□□□ -0.722e-6■□□□□ 9
MCF2L-216ENST00000439475 BNIP3Q12983 259 aa10.54□□□□□ -0.72
MCF2L-216ENST00000439475 FGL2Q14314 439 aa10.54□□□□□ -0.72
MCF2L-216ENST00000439475 LRRC14Q15048 493 aa10.54□□□□□ -0.72
MCF2L-216ENST00000439475 PDK1Q15118 436 aa10.54□□□□□ -0.72
MCF2L-216ENST00000439475 LRRC73Q5JTD7 316 aa10.54□□□□□ -0.72
MCF2L-216ENST00000439475 ARMC12Q5T9G4 340 aa10.54□□□□□ -0.72
MCF2L-216ENST00000439475 GCNT7Q6ZNI0 430 aa10.54□□□□□ -0.72
MCF2L-216ENST00000439475 KIAA1328Q86T90 577 aa10.54□□□□□ -0.72
MCF2L-216ENST00000439475 GATAD2AQ86YP4 633 aa10.54□□□□□ -0.72
MCF2L-216ENST00000439475 RCOR2Q8IZ40 523 aa10.54□□□□□ -0.72
MCF2L-216ENST00000439475 PQLC3Q8N755 202 aa10.54□□□□□ -0.72
MCF2L-216ENST00000439475 ATL2Q8NHH9 583 aa10.54□□□□□ -0.72
MCF2L-216ENST00000439475 SAP25Q8TEE9 199 aa10.54□□□□□ -0.72
MCF2L-216ENST00000439475 BTN2A2Q8WVV5 523 aa10.54□□□□□ -0.72
MCF2L-216ENST00000439475 MAML1Q92585 1016 aa10.54□□□□□ -0.72
MCF2L-216ENST00000439475 VOPP1Q96AW1 172 aa10.54□□□□□ -0.72
MCF2L-216ENST00000439475 CENPTQ96BT3 561 aa10.54□□□□□ -0.72
MCF2L-216ENST00000439475 SEMA3CQ99985 751 aa10.54□□□□□ -0.72
MCF2L-216ENST00000439475 NOD2Q9HC29 1040 aa10.54□□□□□ -0.72
MCF2L-216ENST00000439475 EVA1BQ9NVM1 165 aa10.54□□□□□ -0.72
MCF2L-216ENST00000439475 FTSJ1Q9UET6 329 aa10.54□□□□□ -0.72
MCF2L-216ENST00000439475 PCDHGC4Q9Y5F7 938 aa10.54□□□□□ -0.72
MCF2L-216ENST00000439475 HEY1Q9Y5J3 304 aa10.54□□□□□ -0.72
MCF2L-216ENST00000439475 TDRD6O60522 2096 aaKnown RBP10.53□□□□□ -0.72
MCF2L-216ENST00000439475 SPTY2D1-AS1A0A0U1RR47 76 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 POM121BA6NF01 834 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 TRAFD1O14545 582 aaPredicted RBP10.53□□□□□ -0.72
MCF2L-216ENST00000439475 RAD51BO15315 384 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 HTRA2O43464 458 aaPredicted RBP10.53□□□□□ -0.72
MCF2L-216ENST00000439475 MAP3K6O95382 1288 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 CPP00450 1065 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 ELFN1P0C7U0 828 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 HTR1BP28222 390 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 NR2C2P49116 596 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 LIG3P49916 1009 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 BLKP51451 505 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 EPHB1P54762 984 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 PFN3P60673 137 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 SHC2P98077 582 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 GBE1Q04446 702 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 AP1B1Q10567 949 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 KIF5AQ12840 1032 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 PDE1CQ14123 709 aaPredicted RBP10.53□□□□□ -0.72
MCF2L-216ENST00000439475 ARHGEF7Q14155 803 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 AGERQ15109 404 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 SLC9A4Q6AI14 798 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 C11orf63Q6NUN7 778 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 USP45Q70EL2 814 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 DAAM2Q86T65 1068 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 PARGQ86W56 976 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 CCDC50Q8IVM0 306 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 PGBD5Q8N414 524 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 EID2Q8N6I1 236 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 SPC24Q8NBT2 197 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 ADAMTS14Q8WXS8 1223 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 SPOCK2Q92563 424 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 RBM41Q96IZ5 413 aaKnown RBP10.53□□□□□ -0.72
MCF2L-216ENST00000439475 CNDP2Q96KP4 475 aaKnown RBP10.53□□□□□ -0.72
MCF2L-216ENST00000439475 KLF6Q99612 283 aaPredicted RBP10.53□□□□□ -0.72
MCF2L-216ENST00000439475 DNAJC28Q9NX36 388 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 DTLQ9NZJ0 730 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 GGT7Q9UJ14 662 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 DNPEPQ9ULA0 475 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 HYOU1Q9Y4L1 999 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 TTLL3Q9Y4R7 772 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 RAI2Q9Y5P3 530 aa10.53□□□□□ -0.72
MCF2L-216ENST00000439475 TP53BP1Q12888 1972 aaPredicted RBP10.53□□□□□ -0.72
MCF2L-216ENST00000439475 CNOT1A5YKK6 2376 aaKnown RBP10.53□□□□□ -0.72
MCF2L-216ENST00000439475 GOLGA8CPA6NN73 597 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 BTNL10A8MVZ5 291 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 PDE2AO00408 941 aaPredicted RBP10.52□□□□□ -0.73
MCF2L-216ENST00000439475 ENC1O14682 589 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 SPINT1O43278 529 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 PGLSO95336 258 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 JCHAINP01591 159 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 FTH1P19P0C7X4 201 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 C6P13671 934 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 TGM2P21980 687 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 VIPR1P32241 457 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 MMP12P39900 470 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 VAV2P52735 878 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 GSDMDP57764 484 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 PPIDQ08752 370 aaKnown RBP10.52□□□□□ -0.73
MCF2L-216ENST00000439475 SLC10A2Q12908 348 aaPredicted RBP10.52□□□□□ -0.73
MCF2L-216ENST00000439475 ACOX1Q15067 660 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 SHBQ15464 509 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 KAZNQ674X7 775 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 MFSD7Q6UXD7 560 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 RAD9BQ6WBX8 426 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 LIPIQ6XZB0 460 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 DPPA4Q7L190 304 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 KATNAL2Q8IYT4 538 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 SYCE1Q8N0S2 351 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 PLD5Q8N7P1 536 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 TP53I13Q8NBR0 393 aaPredicted RBP10.52□□□□□ -0.73
MCF2L-216ENST00000439475 EXD1Q8NHP7 514 aa10.52□□□□□ -0.73
MCF2L-216ENST00000439475 TPCN2Q8NHX9 752 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 264.8 ms