RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 SAMD15Q9P1V8 674 aa20.84■□□□□ 0.93
CHD3-204ENST00000439235 PPM1HQ9ULR3 514 aa20.84■□□□□ 0.93
CHD3-204ENST00000439235 PHTF1Q9UMS5 762 aa20.84■□□□□ 0.93
CHD3-204ENST00000439235 FAM170BA6NMN3 283 aa20.83■□□□□ 0.93
CHD3-204ENST00000439235 CHURC1-FNTBB4DL54 471 aa20.83■□□□□ 0.93
CHD3-204ENST00000439235 KPNA3O00505 521 aaPredicted RBP20.83■□□□□ 0.93
CHD3-204ENST00000439235 ADAM23O75077 832 aa20.83■□□□□ 0.93
CHD3-204ENST00000439235 IL1BP01584 269 aa20.83■□□□□ 0.93
CHD3-204ENST00000439235 LAMB3Q13751 1172 aa20.83■□□□□ 0.93
CHD3-204ENST00000439235 QPCTQ16769 361 aa20.83■□□□□ 0.93
CHD3-204ENST00000439235 MSS51Q4VC12 460 aa20.83■□□□□ 0.93
CHD3-204ENST00000439235 CCDC38Q502W7 563 aa20.83■□□□□ 0.93
CHD3-204ENST00000439235 TMC3Q7Z5M5 1100 aa20.83■□□□□ 0.93
CHD3-204ENST00000439235 ZBED8Q8IZ13 594 aa20.83■□□□□ 0.93
CHD3-204ENST00000439235 HNRNPLLQ8WVV9 542 aaKnown RBP20.83■□□□□ 0.93
CHD3-204ENST00000439235 PIH1D2Q8WWB5 315 aa20.83■□□□□ 0.93
CHD3-204ENST00000439235 NAT9Q9BTE0 207 aa20.83■□□□□ 0.93
CHD3-204ENST00000439235 OSBPL6Q9BZF3 934 aa20.83■□□□□ 0.93
CHD3-204ENST00000439235 DYRK4Q9NR20 520 aa20.83■□□□□ 0.93
CHD3-204ENST00000439235 HACD3Q9P035 362 aa20.83■□□□□ 0.93
CHD3-204ENST00000439235 RAPGEFL1Q9UHV5 662 aa20.83■□□□□ 0.93
CHD3-204ENST00000439235 TTC28Q96AY4 2481 aa20.83■□□□□ 0.92
CHD3-204ENST00000439235 MYO18AQ92614 2054 aaKnown RBP20.82■□□□□ 0.92
CHD3-204ENST00000439235 ANKRD66B4E2M5 251 aa20.82■□□□□ 0.92
CHD3-204ENST00000439235 TNFRSF10AO00220 468 aa20.82■□□□□ 0.92
CHD3-204ENST00000439235 ATG13O75143 517 aa20.82■□□□□ 0.92
CHD3-204ENST00000439235 ADH1BP00325 375 aa20.82■□□□□ 0.92
CHD3-204ENST00000439235 TPH1P17752 444 aa20.82■□□□□ 0.92
CHD3-204ENST00000439235 XPAP23025 273 aaPredicted RBP20.82■□□□□ 0.92
CHD3-204ENST00000439235 ITGB7P26010 798 aa20.82■□□□□ 0.92
CHD3-204ENST00000439235 MAGEA4P43358 317 aa20.82■□□□□ 0.92
CHD3-204ENST00000439235 PSMD8P48556 350 aa20.82■□□□□ 0.92
CHD3-204ENST00000439235 CERCAMQ5T4B2 595 aa20.82■□□□□ 0.92
CHD3-204ENST00000439235 CASC4Q6P4E1 433 aa20.82■□□□□ 0.92
CHD3-204ENST00000439235 USP45Q70EL2 814 aa20.82■□□□□ 0.92
CHD3-204ENST00000439235 CCNJLQ8IV13 435 aa20.82■□□□□ 0.92
CHD3-204ENST00000439235 MMAAQ8IVH4 418 aaKnown RBP20.82■□□□□ 0.92
CHD3-204ENST00000439235 PPHLN1Q8NEY8 458 aaKnown RBP20.82■□□□□ 0.92
CHD3-204ENST00000439235 PYROXD1Q8WU10 500 aa20.82■□□□□ 0.92
CHD3-204ENST00000439235 PTCD2Q8WV60 388 aaKnown RBP20.82■□□□□ 0.92
CHD3-204ENST00000439235 STAMBPL1Q96FJ0 436 aa20.82■□□□□ 0.92
CHD3-204ENST00000439235 SIGLEC10Q96LC7 697 aa20.82■□□□□ 0.92
CHD3-204ENST00000439235 TTC25Q96NG3 672 aa20.82■□□□□ 0.92
CHD3-204ENST00000439235 NECAB3Q96P71 396 aaPredicted RBP20.82■□□□□ 0.92
CHD3-204ENST00000439235 RANBP9Q96S59 729 aa20.82■□□□□ 0.92
CHD3-204ENST00000439235 FOXQ1Q9C009 403 aa20.82■□□□□ 0.92
CHD3-204ENST00000439235 SYBUQ9NX95 663 aa20.82■□□□□ 0.92
CHD3-204ENST00000439235 CHMP2BQ9UQN3 213 aa20.82■□□□□ 0.92
CHD3-204ENST00000439235 MAD1L1Q9Y6D9 718 aa20.82■□□□□ 0.92
CHD3-204ENST00000439235 TEX264Q9Y6I9 313 aa20.82■□□□□ 0.92
CHD3-204ENST00000439235 A0A0J9YYE9 177 aa20.81■□□□□ 0.92
CHD3-204ENST00000439235 A0A1W2PQF6 199 aa20.81■□□□□ 0.92
CHD3-204ENST00000439235 MAGEB16A2A368 324 aa20.81■□□□□ 0.92
CHD3-204ENST00000439235 CAPN8A6NHC0 703 aa20.81■□□□□ 0.92
CHD3-204ENST00000439235 UPK3BL1B0FP48 263 aa20.81■□□□□ 0.92
CHD3-204ENST00000439235 UPK3BL2E5RIL1 263 aa20.81■□□□□ 0.92
CHD3-204ENST00000439235 STK25O00506 426 aa20.81■□□□□ 0.92
CHD3-204ENST00000439235 BANF1O75531 89 aa20.81■□□□□ 0.92
CHD3-204ENST00000439235 TRBC1P01850 177 aa20.81■□□□□ 0.92
CHD3-204ENST00000439235 H2AFXP16104 143 aaPredicted RBP20.81■□□□□ 0.92
CHD3-204ENST00000439235 ELK3P41970 407 aa20.81■□□□□ 0.92
CHD3-204ENST00000439235 POU6F1Q14863 301 aa20.81■□□□□ 0.92
CHD3-204ENST00000439235 CST6Q15828 149 aa20.81■□□□□ 0.92
CHD3-204ENST00000439235 PCID2Q5JVF3 399 aa20.81■□□□□ 0.92
CHD3-204ENST00000439235 KIAA1211LQ6NV74 962 aa20.81■□□□□ 0.92
CHD3-204ENST00000439235 Q6ZS52 159 aa20.81■□□□□ 0.92
CHD3-204ENST00000439235 TRMT10CQ7L0Y3 403 aaKnown RBP20.81■□□□□ 0.92
CHD3-204ENST00000439235 ZSWIM9Q86XI8 627 aa20.81■□□□□ 0.92
CHD3-204ENST00000439235 FBXO36Q8NEA4 188 aa20.81■□□□□ 0.92
CHD3-204ENST00000439235 BLOC1S5Q8TDH9 187 aa20.81■□□□□ 0.92
CHD3-204ENST00000439235 EBNA1BP2Q99848 306 aaKnown RBP20.81■□□□□ 0.92
CHD3-204ENST00000439235 SARDHQ9UL12 918 aa20.81■□□□□ 0.92
CHD3-204ENST00000439235 PPIL1Q9Y3C6 166 aa20.81■□□□□ 0.92
CHD3-204ENST00000439235 MTF2Q9Y483 593 aaPredicted RBP20.81■□□□□ 0.92
CHD3-204ENST00000439235 TCF20Q9UGU0 1960 aaKnown RBP20.8■□□□□ 0.92
CHD3-204ENST00000439235 HEATR9A2RTY3 570 aa20.8■□□□□ 0.92
CHD3-204ENST00000439235 C16orf96A6NNT2 1141 aa20.8■□□□□ 0.92
CHD3-204ENST00000439235 PGAM1P18669 254 aa20.8■□□□□ 0.92
CHD3-204ENST00000439235 ADRA1DP25100 572 aa20.8■□□□□ 0.92
CHD3-204ENST00000439235 SLC8A1P32418 973 aa20.8■□□□□ 0.92
CHD3-204ENST00000439235 SUOXP51687 545 aa20.8■□□□□ 0.92
CHD3-204ENST00000439235 COPAP53621 1224 aa20.8■□□□□ 0.92
CHD3-204ENST00000439235 PMS2P54278 862 aa20.8■□□□□ 0.92
CHD3-204ENST00000439235 SATB1Q01826 763 aa20.8■□□□□ 0.92
CHD3-204ENST00000439235 SIGLEC14Q08ET2 396 aa20.8■□□□□ 0.92
CHD3-204ENST00000439235 SEPT6Q14141 434 aa20.8■□□□□ 0.92
CHD3-204ENST00000439235 FASTKD3Q14CZ7 662 aaKnown RBP20.8■□□□□ 0.92
CHD3-204ENST00000439235 PARS2Q7L3T8 475 aaKnown RBP20.8■□□□□ 0.92
CHD3-204ENST00000439235 ANKMY2Q8IV38 441 aa20.8■□□□□ 0.92
CHD3-204ENST00000439235 MPP5Q8N3R9 675 aa20.8■□□□□ 0.92
CHD3-204ENST00000439235 PJA1Q8NG27 643 aa20.8■□□□□ 0.92
CHD3-204ENST00000439235 ARRDC3Q96B67 414 aa20.8■□□□□ 0.92
CHD3-204ENST00000439235 UHRF1Q96T88 793 aaPredicted RBP20.8■□□□□ 0.92
CHD3-204ENST00000439235 TXLNGYQ9BZA5 131 aa20.8■□□□□ 0.92
CHD3-204ENST00000439235 CDC42EP4Q9H3Q1 356 aaKnown RBP20.8■□□□□ 0.92
CHD3-204ENST00000439235 TRABDQ9H4I3 376 aa20.8■□□□□ 0.92
CHD3-204ENST00000439235 MRM3Q9HC36 420 aaKnown RBP20.8■□□□□ 0.92
CHD3-204ENST00000439235 MAGEE1Q9HCI5 957 aa20.8■□□□□ 0.92
CHD3-204ENST00000439235 ARFGAP3Q9NP61 516 aa20.8■□□□□ 0.92
CHD3-204ENST00000439235 ZC3H7BQ9UGR2 993 aaKnown RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms