RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 ZNF33AQ06730 810 aa13.99□□□□□ -0.17
PTCHD3-201ENST00000438700 CNGA3Q16281 694 aa13.99□□□□□ -0.17
PTCHD3-201ENST00000438700 RALGPS1Q5JS13 557 aa13.99□□□□□ -0.17
PTCHD3-201ENST00000438700 RAP1GAP2Q684P5 730 aa13.99□□□□□ -0.17
PTCHD3-201ENST00000438700 TPGS2Q68CL5 300 aa13.99□□□□□ -0.17
PTCHD3-201ENST00000438700 ZNF683Q8IZ20 524 aa13.99□□□□□ -0.17
PTCHD3-201ENST00000438700 LZTR1Q8N653 840 aa13.99□□□□□ -0.17
PTCHD3-201ENST00000438700 OR6Y1Q8NGX8 325 aa13.99□□□□□ -0.17
PTCHD3-201ENST00000438700 MAPK15Q8TD08 544 aa13.99□□□□□ -0.17
PTCHD3-201ENST00000438700 SCYL1Q96KG9 808 aa13.99□□□□□ -0.17
PTCHD3-201ENST00000438700 CEP295NLQ96MC4 621 aa13.99□□□□□ -0.17
PTCHD3-201ENST00000438700 NR1H4Q96RI1 486 aaPredicted RBP13.99□□□□□ -0.17
PTCHD3-201ENST00000438700 DNAJC28Q9NX36 388 aa13.99□□□□□ -0.17
PTCHD3-201ENST00000438700 LOC100653049A0A140TA62 436 aa13.99□□□□□ -0.17
PTCHD3-201ENST00000438700 DCXO43602 365 aa13.99□□□□□ -0.17
PTCHD3-201ENST00000438700 KRT34O76011 436 aa13.99□□□□□ -0.17
PTCHD3-201ENST00000438700 SLC35E2BP0CK96 405 aa13.99□□□□□ -0.17
PTCHD3-201ENST00000438700 HMGA1P17096 107 aaKnown RBP13.99□□□□□ -0.17
PTCHD3-201ENST00000438700 CRABP2P29373 138 aa13.99□□□□□ -0.17
PTCHD3-201ENST00000438700 MAXP61244 160 aa13.99□□□□□ -0.17
PTCHD3-201ENST00000438700 PDCD2Q16342 344 aaPredicted RBP13.99□□□□□ -0.17
PTCHD3-201ENST00000438700 GSTA3Q16772 222 aa13.99□□□□□ -0.17
PTCHD3-201ENST00000438700 SLC9B1Q4ZJI4 515 aa13.99□□□□□ -0.17
PTCHD3-201ENST00000438700 C16orf59Q7L2K0 433 aa13.99□□□□□ -0.17
PTCHD3-201ENST00000438700 NET1Q7Z628 596 aaPredicted RBP13.99□□□□□ -0.17
PTCHD3-201ENST00000438700 PHTF2Q8N3S3 785 aa13.99□□□□□ -0.17
PTCHD3-201ENST00000438700 PPHLN1Q8NEY8 458 aaKnown RBP13.99□□□□□ -0.17
PTCHD3-201ENST00000438700 GATA5Q9BWX5 397 aaPredicted RBP13.99□□□□□ -0.17
PTCHD3-201ENST00000438700 STN1Q9H668 368 aaKnown RBP13.99□□□□□ -0.17
PTCHD3-201ENST00000438700 IPO11Q9UI26 975 aaKnown RBP13.99□□□□□ -0.17
PTCHD3-201ENST00000438700 AP3B1O00203 1094 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 PSMD3O43242 534 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 ZMPSTE24O75844 475 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 CNTN5O94779 1100 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 ATP5BP06576 529 aaKnown RBP13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 CPOXP36551 454 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 KCNQ1P51787 676 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 DNAL1Q4LDG9 190 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 ALFQ53S48 1182 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 ZNF354CQ86Y25 554 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 CEP97Q8IW35 865 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 MFSD6LQ8IWD5 586 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 PNPLA1Q8N8W4 532 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 TDRD5Q8NAT2 981 aaKnown RBP13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 MRGPRX2Q96LB1 330 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 ZYG11BQ9C0D3 744 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 FAM192AQ9GZU8 254 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 NACA2Q9H009 215 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 CDH19Q9H159 772 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 A0A088AWK7 358 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 GOLGA8QA0A0J9YX86 632 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 TTC24A2A3L6 582 aaPredicted RBP13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 GOLGA8OA6NCC3 632 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 ZNF840PA6NDX5 716 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 F8W8V4 182 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 GOLGA8NF8WBI6 632 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 NEMP1O14524 444 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 PRRG1O14668 218 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 ALOX15P16050 662 aaPredicted RBP13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 MPSTP25325 297 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 SLC1A2P43004 574 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 ALDH1A3P47895 512 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 COPAP53621 1224 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 GEMP55040 296 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 AP2B1P63010 937 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 RING1Q06587 406 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 DLG1Q12959 904 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 PLD1Q13393 1074 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 RAB33AQ14088 237 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 AFMIDQ63HM1 303 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 ZNF470Q6ECI4 717 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 FBXL22Q6P050 247 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 SATL1Q86VE3 508 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 CENPLQ8N0S6 344 aaPredicted RBP13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 PDZD8Q8NEN9 1154 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 IGSF8Q969P0 613 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 CCDC124Q96CT7 223 aaKnown RBP13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 TSNARE1Q96NA8 513 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 KLHL5Q96PQ7 755 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 C1QTNF1Q9BXJ1 281 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 NOL6Q9H6R4 1146 aaKnown RBP13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 OXSMQ9NWU1 459 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 HSFX1Q9UBD0 423 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 DNMT3LQ9UJW3 386 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 ADAMTS6Q9UKP5 1117 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 SORCS3Q9UPU3 1222 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 RUVBL2Q9Y230 463 aaKnown RBP13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 TCAF1Q9Y4C2 921 aa13.98□□□□□ -0.17
PTCHD3-201ENST00000438700 WASH4PA8MWX3 477 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 AURKAO14965 403 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 CIB2O75838 187 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 PDE5AO76074 875 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 KLHL2O95198 593 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 GJB5O95377 273 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 SBK3P0C264 359 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 RHOQP17081 205 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 ADRA1AP35348 466 aa13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 ATP5C1P36542 298 aaKnown RBP13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 ARCN1P48444 511 aaKnown RBP13.97□□□□□ -0.17
PTCHD3-201ENST00000438700 EPHB1P54762 984 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms