RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 HTRA2O43464 458 aaPredicted RBP24.9■■□□□ 1.58
RAPGEF1-206ENST00000438647 MAP3K6O95382 1288 aa24.9■■□□□ 1.58
RAPGEF1-206ENST00000438647 FTH1P19P0C7X4 201 aa24.9■■□□□ 1.58
RAPGEF1-206ENST00000438647 C6P13671 934 aa24.9■■□□□ 1.58
RAPGEF1-206ENST00000438647 TNNT1P13805 278 aa24.9■■□□□ 1.58
RAPGEF1-206ENST00000438647 MAXP61244 160 aa24.9■■□□□ 1.58
RAPGEF1-206ENST00000438647 SLC22A18ASQ8N1D0 253 aa24.9■■□□□ 1.58
RAPGEF1-206ENST00000438647 FTSJ1Q9UET6 329 aa24.9■■□□□ 1.58
RAPGEF1-206ENST00000438647 HYOU1Q9Y4L1 999 aa24.9■■□□□ 1.58
RAPGEF1-206ENST00000438647 ALG6Q9Y672 507 aa24.9■■□□□ 1.58
RAPGEF1-206ENST00000438647 SHROOM3Q8TF72 1996 aa24.89■■□□□ 1.58
RAPGEF1-206ENST00000438647 C3orf70A6NLC5 250 aaPredicted RBP24.89■■□□□ 1.58
RAPGEF1-206ENST00000438647 TNFSF14O43557 240 aa24.89■■□□□ 1.58
RAPGEF1-206ENST00000438647 CES1P23141 567 aa24.89■■□□□ 1.58
RAPGEF1-206ENST00000438647 LIG3P49916 1009 aa24.89■■□□□ 1.58
RAPGEF1-206ENST00000438647 PFN3P60673 137 aa24.89■■□□□ 1.58
RAPGEF1-206ENST00000438647 ITKQ08881 620 aa24.89■■□□□ 1.58
RAPGEF1-206ENST00000438647 BNIP3Q12983 259 aa24.89■■□□□ 1.58
RAPGEF1-206ENST00000438647 SLC9A4Q6AI14 798 aa24.89■■□□□ 1.58
RAPGEF1-206ENST00000438647 C11orf63Q6NUN7 778 aa24.89■■□□□ 1.58
RAPGEF1-206ENST00000438647 PLD5Q8N7P1 536 aa24.89■■□□□ 1.58
RAPGEF1-206ENST00000438647 CCNYQ8ND76 341 aa24.89■■□□□ 1.58
RAPGEF1-206ENST00000438647 PDCD6IPQ8WUM4 868 aaKnown RBP24.89■■□□□ 1.58
RAPGEF1-206ENST00000438647 BAG1Q99933 345 aaPredicted RBP24.89■■□□□ 1.58
RAPGEF1-206ENST00000438647 PCDHGC4Q9Y5F7 938 aa24.89■■□□□ 1.58
RAPGEF1-206ENST00000438647 ANKRD36A6QL64 1941 aa24.88■■□□□ 1.57
RAPGEF1-206ENST00000438647 SPTY2D1-AS1A0A0U1RR47 76 aa24.88■■□□□ 1.57
RAPGEF1-206ENST00000438647 TTC24A2A3L6 582 aaPredicted RBP24.88■■□□□ 1.57
RAPGEF1-206ENST00000438647 GOLGA6L6A8MZA4 724 aa24.88■■□□□ 1.57
RAPGEF1-206ENST00000438647 LZTS3O60299 673 aaPredicted RBP24.88■■□□□ 1.57
RAPGEF1-206ENST00000438647 CCNB1P14635 433 aa24.88■■□□□ 1.57
RAPGEF1-206ENST00000438647 YPEL5P62699 121 aa24.88■■□□□ 1.57
RAPGEF1-206ENST00000438647 PDE1CQ14123 709 aaPredicted RBP24.88■■□□□ 1.57
RAPGEF1-206ENST00000438647 PTK2BQ14289 1009 aa24.88■■□□□ 1.57
RAPGEF1-206ENST00000438647 LRRC14Q15048 493 aa24.88■■□□□ 1.57
RAPGEF1-206ENST00000438647 AGERQ15109 404 aa24.88■■□□□ 1.57
RAPGEF1-206ENST00000438647 PARGQ86W56 976 aa24.88■■□□□ 1.57
RAPGEF1-206ENST00000438647 RFX6Q8HWS3 928 aa24.88■■□□□ 1.57
RAPGEF1-206ENST00000438647 CCDC13Q8IYE1 715 aa24.88■■□□□ 1.57
RAPGEF1-206ENST00000438647 TP53I13Q8NBR0 393 aaPredicted RBP24.88■■□□□ 1.57
RAPGEF1-206ENST00000438647 RNF25Q96BH1 459 aaPredicted RBP24.88■■□□□ 1.57
RAPGEF1-206ENST00000438647 RBM22Q9NW64 420 aaKnown RBP eCLIP24.88■■□□□ 1.57
RAPGEF1-206ENST00000438647 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.88■■□□□ 1.57
RAPGEF1-206ENST00000438647 HEY1Q9Y5J3 304 aa24.88■■□□□ 1.57
RAPGEF1-206ENST00000438647 CPP00450 1065 aa24.87■■□□□ 1.57
RAPGEF1-206ENST00000438647 PRKCGP05129 697 aa24.87■■□□□ 1.57
RAPGEF1-206ENST00000438647 ELFN1P0C7U0 828 aa24.87■■□□□ 1.57
RAPGEF1-206ENST00000438647 IGFALSP35858 605 aa24.87■■□□□ 1.57
RAPGEF1-206ENST00000438647 THOP1P52888 689 aa24.87■■□□□ 1.57
RAPGEF1-206ENST00000438647 HNRNPKP61978 463 aaKnown RBP eCLIP24.87■■□□□ 1.57
RAPGEF1-206ENST00000438647 SLC10A2Q12908 348 aaPredicted RBP24.87■■□□□ 1.57
RAPGEF1-206ENST00000438647 PDK1Q15118 436 aa24.87■■□□□ 1.57
RAPGEF1-206ENST00000438647 ARMC12Q5T9G4 340 aa24.87■■□□□ 1.57
RAPGEF1-206ENST00000438647 ALG1LQ6GMV1 187 aa24.87■■□□□ 1.57
RAPGEF1-206ENST00000438647 DPPA4Q7L190 304 aa24.87■■□□□ 1.57
RAPGEF1-206ENST00000438647 NSMCE3Q96MG7 304 aa24.87■■□□□ 1.57
RAPGEF1-206ENST00000438647 SEMA3CQ99985 751 aa24.87■■□□□ 1.57
RAPGEF1-206ENST00000438647 DNAJC28Q9NX36 388 aa24.87■■□□□ 1.57
RAPGEF1-206ENST00000438647 PHTF1Q9UMS5 762 aa24.87■■□□□ 1.57
RAPGEF1-206ENST00000438647 TFR2Q9UP52 801 aa24.87■■□□□ 1.57
RAPGEF1-206ENST00000438647 H3BM21 787 aa24.86■■□□□ 1.57
RAPGEF1-206ENST00000438647 SDC3O75056 442 aa24.86■■□□□ 1.57
RAPGEF1-206ENST00000438647 LDOC1O95751 146 aaPredicted RBP24.86■■□□□ 1.57
RAPGEF1-206ENST00000438647 PPIDQ08752 370 aaKnown RBP24.86■■□□□ 1.57
RAPGEF1-206ENST00000438647 TFDP2Q14188 446 aa24.86■■□□□ 1.57
RAPGEF1-206ENST00000438647 HS1BP3Q53T59 392 aa24.86■■□□□ 1.57
RAPGEF1-206ENST00000438647 BZW1Q7L1Q6 419 aaKnown RBP24.86■■□□□ 1.57
RAPGEF1-206ENST00000438647 KANSL1Q7Z3B3 1105 aa24.86■■□□□ 1.57
RAPGEF1-206ENST00000438647 DAAM2Q86T65 1068 aa24.86■■□□□ 1.57
RAPGEF1-206ENST00000438647 NDUFAF2Q8N183 169 aa24.86■■□□□ 1.57
RAPGEF1-206ENST00000438647 EID2Q8N6I1 236 aa24.86■■□□□ 1.57
RAPGEF1-206ENST00000438647 ADAMTS14Q8WXS8 1223 aa24.86■■□□□ 1.57
RAPGEF1-206ENST00000438647 WASF3Q9UPY6 502 aa24.86■■□□□ 1.57
RAPGEF1-206ENST00000438647 COQ6Q9Y2Z9 468 aa24.86■■□□□ 1.57
RAPGEF1-206ENST00000438647 TTLL3Q9Y4R7 772 aa24.86■■□□□ 1.57
RAPGEF1-206ENST00000438647 PPP1R12AO14974 1030 aaPredicted RBP24.85■■□□□ 1.57
RAPGEF1-206ENST00000438647 PGLSO95336 258 aa24.85■■□□□ 1.57
RAPGEF1-206ENST00000438647 KRT10P13645 584 aa24.85■■□□□ 1.57
RAPGEF1-206ENST00000438647 CA4P22748 312 aa24.85■■□□□ 1.57
RAPGEF1-206ENST00000438647 TRAF2Q12933 501 aa24.85■■□□□ 1.57
RAPGEF1-206ENST00000438647 RALGDSQ12967 914 aa24.85■■□□□ 1.57
RAPGEF1-206ENST00000438647 FZD2Q14332 565 aa24.85■■□□□ 1.57
RAPGEF1-206ENST00000438647 IRF4Q15306 451 aa24.85■■□□□ 1.57
RAPGEF1-206ENST00000438647 MFSD7Q6UXD7 560 aa24.85■■□□□ 1.57
RAPGEF1-206ENST00000438647 RAD9BQ6WBX8 426 aa24.85■■□□□ 1.57
RAPGEF1-206ENST00000438647 LIPIQ6XZB0 460 aa24.85■■□□□ 1.57
RAPGEF1-206ENST00000438647 TXLNBQ8N3L3 684 aa24.85■■□□□ 1.57
RAPGEF1-206ENST00000438647 TPCN2Q8NHX9 752 aa24.85■■□□□ 1.57
RAPGEF1-206ENST00000438647 CNDP2Q96KP4 475 aaKnown RBP24.85■■□□□ 1.57
RAPGEF1-206ENST00000438647 BRD8Q9H0E9 1235 aa24.85■■□□□ 1.57
RAPGEF1-206ENST00000438647 GOLPH3Q9H4A6 298 aa24.85■■□□□ 1.57
RAPGEF1-206ENST00000438647 MBNL1Q9NR56 388 aaKnown RBP24.85■■□□□ 1.57
RAPGEF1-206ENST00000438647 RAI2Q9Y5P3 530 aa24.85■■□□□ 1.57
RAPGEF1-206ENST00000438647 COL5A1P20908 1838 aaPredicted RBP24.84■■□□□ 1.57
RAPGEF1-206ENST00000438647 NEMP2A6NFY4 417 aa24.84■■□□□ 1.57
RAPGEF1-206ENST00000438647 BTNL10A8MVZ5 291 aa24.84■■□□□ 1.57
RAPGEF1-206ENST00000438647 PIAS2O75928 621 aa24.84■■□□□ 1.57
RAPGEF1-206ENST00000438647 ZRANB2O95218 330 aaKnown RBP eCLIP24.84■■□□□ 1.57
RAPGEF1-206ENST00000438647 CSF2P04141 144 aa24.84■■□□□ 1.57
RAPGEF1-206ENST00000438647 ATXN1LP0C7T5 689 aaKnown RBP24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms