RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 TRMT1Q9NXH9 659 aaKnown RBP11.56□□□□□ -0.56
SNHG3-202ENST00000437681 RIMKLBQ9ULI2 386 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 ZNF106Q9H2Y7 1883 aaKnown RBP11.56□□□□□ -0.56
SNHG3-202ENST00000437681 XIRP2A4UGR9 3374 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 MUSKO15146 869 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 PHF2O75151 1096 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 SUN1O94901 812 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 FGGP02679 453 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 MMP2P08253 660 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 PSMA3P25788 255 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 VIPR1P32241 457 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 DYNLT1P63172 113 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 PDE1BQ01064 536 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 CNTN1Q12860 1018 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 ZBTB17Q13105 803 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 ZSCAN26Q16670 478 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 TMEM259Q4ZIN3 620 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 ANKRD20A2Q5SQ80 823 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 ANKRD20A1Q5TYW2 823 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 ANKRD20A3Q5VUR7 823 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 FBXL19Q6PCT2 694 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 USP45Q70EL2 814 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 CEP68Q76N32 757 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 PARS2Q7L3T8 475 aaKnown RBP11.56□□□□□ -0.56
SNHG3-202ENST00000437681 LINC00523Q86TU6 105 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 HORMAD1Q86X24 394 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 ZNF567Q8N184 647 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 SCRN2Q96FV2 425 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 TOE1Q96GM8 510 aaKnown RBP11.56□□□□□ -0.56
SNHG3-202ENST00000437681 HERPUD2Q9BSE4 406 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 NOD2Q9HC29 1040 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 MAGEE1Q9HCI5 957 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 PCYOX1Q9UHG3 505 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 SARDHQ9UL12 918 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 MYO18AQ92614 2054 aaKnown RBP11.56□□□□□ -0.56
SNHG3-202ENST00000437681 USP27XA6NNY8 438 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 YKT6O15498 198 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 NDST3O95803 873 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 LMNAP02545 664 aaKnown RBP11.56□□□□□ -0.56
SNHG3-202ENST00000437681 FGF1P05230 155 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 H2AFXP16104 143 aaPredicted RBP11.56□□□□□ -0.56
SNHG3-202ENST00000437681 ACTN2P35609 894 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 MMP12P39900 470 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 PAFAH1B1P43034 410 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 CKAP4Q07065 602 aaKnown RBP11.56□□□□□ -0.56
SNHG3-202ENST00000437681 ZNF211Q13398 564 aaPredicted RBP11.56□□□□□ -0.56
SNHG3-202ENST00000437681 SETDB1Q15047 1291 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 UGP2Q16851 508 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 TEX35Q5T0J7 233 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 CFAP58Q5T655 872 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 KDELC1Q6UW63 502 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 TP53INP2Q8IXH6 220 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 OXR1Q8N573 874 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 PEX13Q92968 403 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 KLHL32Q96NJ5 620 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 C1QTNF2Q9BXJ5 285 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 NEUROG2Q9H2A3 272 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 PCDH9Q9HC56 1237 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 KLHL8Q9P2G9 620 aaPredicted RBP11.56□□□□□ -0.56
SNHG3-202ENST00000437681 GMEB2Q9UKD1 530 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 RAI2Q9Y5P3 530 aa11.56□□□□□ -0.56
SNHG3-202ENST00000437681 KPNA3O00505 521 aaPredicted RBP11.55□□□□□ -0.56
SNHG3-202ENST00000437681 PPFIA2O75334 1257 aa11.55□□□□□ -0.56
SNHG3-202ENST00000437681 RBL1P28749 1068 aa11.55□□□□□ -0.56
SNHG3-202ENST00000437681 SCNN1BP51168 640 aa11.55□□□□□ -0.56
SNHG3-202ENST00000437681 DMWDQ09019 674 aa11.55□□□□□ -0.56
SNHG3-202ENST00000437681 PLA2G2CQ5R387 149 aa11.55□□□□□ -0.56
SNHG3-202ENST00000437681 ATXN7L2Q5T6C5 722 aaPredicted RBP11.55□□□□□ -0.56
SNHG3-202ENST00000437681 LYSMD4Q5XG99 296 aa11.55□□□□□ -0.56
SNHG3-202ENST00000437681 PDPK2PQ6A1A2 396 aa11.55□□□□□ -0.56
SNHG3-202ENST00000437681 NAPEPLDQ6IQ20 393 aa11.55□□□□□ -0.56
SNHG3-202ENST00000437681 SYT12Q8IV01 421 aa11.55□□□□□ -0.56
SNHG3-202ENST00000437681 RYBPQ8N488 228 aaPredicted RBP11.55□□□□□ -0.56
SNHG3-202ENST00000437681 PIH1D2Q8WWB5 315 aa11.55□□□□□ -0.56
SNHG3-202ENST00000437681 FRMD8Q9BZ67 464 aaPredicted RBP11.55□□□□□ -0.56
SNHG3-202ENST00000437681 TM6SF2Q9BZW4 377 aa11.55□□□□□ -0.56
SNHG3-202ENST00000437681 LRRC40Q9H9A6 602 aa11.55□□□□□ -0.56
SNHG3-202ENST00000437681 CYP8B1Q9UNU6 501 aa11.55□□□□□ -0.56
SNHG3-202ENST00000437681 SMG5Q9UPR3 1016 aaKnown RBP11.55□□□□□ -0.56
SNHG3-202ENST00000437681 CAPN8A6NHC0 703 aa11.55□□□□□ -0.56
SNHG3-202ENST00000437681 POLR3GO15318 223 aaPredicted RBP11.55□□□□□ -0.56
SNHG3-202ENST00000437681 MAP3K13O43283 966 aa11.55□□□□□ -0.56
SNHG3-202ENST00000437681 RNASEH2AO75792 299 aaKnown RBP11.55□□□□□ -0.56
SNHG3-202ENST00000437681 GNSP15586 552 aa11.55□□□□□ -0.56
SNHG3-202ENST00000437681 XPAP23025 273 aaPredicted RBP11.55□□□□□ -0.56
SNHG3-202ENST00000437681 CD68P34810 354 aaPredicted RBP11.55□□□□□ -0.56
SNHG3-202ENST00000437681 RGRP47804 291 aa11.55□□□□□ -0.56
SNHG3-202ENST00000437681 DNA2P51530 1060 aa11.55□□□□□ -0.56
SNHG3-202ENST00000437681 DCDC1P59894 354 aa11.55□□□□□ -0.56
SNHG3-202ENST00000437681 NIPAL4Q0D2K0 466 aa11.55□□□□□ -0.56
SNHG3-202ENST00000437681 SEMA5AQ13591 1074 aa11.55□□□□□ -0.56
SNHG3-202ENST00000437681 CCDC70Q6NSX1 233 aa11.55□□□□□ -0.56
SNHG3-202ENST00000437681 IL27RAQ6UWB1 636 aa11.55□□□□□ -0.56
SNHG3-202ENST00000437681 PACS2Q86VP3 889 aa11.55□□□□□ -0.56
SNHG3-202ENST00000437681 ERVMER34-1Q9H9K5 563 aa11.55□□□□□ -0.56
SNHG3-202ENST00000437681 RRP15Q9Y3B9 282 aaKnown RBP11.55□□□□□ -0.56
SNHG3-202ENST00000437681 A0A0J9YYE9 177 aa11.54□□□□□ -0.56
SNHG3-202ENST00000437681 A0A1W2PP55 124 aa11.54□□□□□ -0.56
SNHG3-202ENST00000437681 A0A1W2PPC4 97 aa11.54□□□□□ -0.56
SNHG3-202ENST00000437681 PRAMEF26H0Y7S4 382 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms