RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 BRD3Q15059 726 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 TPSAB1Q15661 275 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 DGKKQ5KSL6 1271 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 GRAMD4Q6IC98 578 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 SDE2Q6IQ49 451 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 FBXO38Q6PIJ6 1188 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 KDELC1Q6UW63 502 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 ZNF534Q76KX8 674 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 RAB44Q7Z6P3 723 aaPredicted RBP7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 HOOK3Q86VS8 718 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 SLITRK4Q8IW52 837 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 ZCCHC9Q8N567 271 aaKnown RBP7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 MCUQ8NE86 351 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 MAFAQ8NHW3 353 aaPredicted RBP7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 WFIKKN2Q8TEU8 576 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 CYB5D2Q8WUJ1 264 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 HNRNPLLQ8WVV9 542 aaKnown RBP7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 ANKRD7Q92527 254 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 NKD1Q969G9 470 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 EXOC4Q96A65 974 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 VOPP1Q96AW1 172 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 RPL10LQ96L21 214 aaKnown RBP7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 RBM15Q96T37 977 aaKnown RBP eCLIP7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 SEMA3CQ99985 751 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 CINPQ9BW66 212 aaPredicted RBP7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 TXLNGYQ9BZA5 131 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 FAM129AQ9BZQ8 928 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 POLR1EQ9GZS1 481 aaKnown RBP7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 SLC25A51Q9H1U9 297 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 TRPV5Q9NQA5 729 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 EIF2B3Q9NR50 452 aaKnown RBP7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 UBP1Q9NZI7 540 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 SIRPGQ9P1W8 387 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 GPN3Q9UHW5 284 aaPredicted RBP7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 SLCO3A1Q9UIG8 710 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 SHOC2Q9UQ13 582 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 ERVW-1Q9UQF0 538 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 HS3ST2Q9Y278 367 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 TTLL3Q9Y4R7 772 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 TRANK1O15050 2925 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 CCDC151A5D8V7 595 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 E7EVH7 732 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 NDC80O14777 642 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 INSIG1O15503 277 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 TIMM44O43615 452 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 NARSO43776 548 aaKnown RBP7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 AVILO75366 819 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 PMPCBO75439 489 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 SMNDC1O75940 238 aaKnown RBP eCLIP7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 ANXA9O76027 345 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 NEBLO76041 1014 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 SUN1O94901 812 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 AP2A1O95782 977 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 AGTP01019 485 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 DLDP09622 509 aaKnown RBP7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 POLR2EP19388 210 aaKnown RBP7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 ADRA1AP35348 466 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 EIF2DP41214 584 aaKnown RBP7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 CD86P42081 329 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 GALK1P51570 392 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 WNT3AP56704 352 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 CDK16Q00536 496 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 SULT2A1Q06520 285 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 NSUN2Q08J23 767 aaKnown RBP eCLIP7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 OLIG2Q13516 323 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 PRPSAP1Q14558 356 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 ZNF235Q14590 738 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 BEND6Q5SZJ8 279 aaPredicted RBP7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 FNBP1LQ5T0N5 605 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 ATXN7L2Q5T6C5 722 aaPredicted RBP7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 DENND5AQ6IQ26 1287 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 FOXR1Q6PIV2 292 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 CAND1Q86VP6 1230 aaKnown RBP7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 AGGF1Q8N302 714 aaeCLIP7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 BBS5Q8N3I7 341 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 SH2D3CQ8N5H7 860 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 TERB1Q8NA31 727 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 ATP11CQ8NB49 1132 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 CSGALNACT1Q8TDX6 532 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 FRS2Q8WU20 508 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 EZH1Q92800 747 aaPredicted RBP7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 CAVIN3Q969G5 261 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 EXOC2Q96KP1 924 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 GDAP1L1Q96MZ0 367 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 HHIPQ96QV1 700 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 NUDCD1Q96RS6 583 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 FMO2Q99518 471 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 TNKS2Q9H2K2 1166 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 RASSF4Q9H2L5 321 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 CLEC4MQ9H2X3 399 aaPredicted RBP7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 NOD2Q9HC29 1040 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 ELOVL2Q9NXB9 296 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 AAR2Q9Y312 384 aaKnown RBP7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 C2orf16Q68DN1 1984 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 MYO7AQ13402 2215 aa7.11□□□□□ -1.27
LSM3P3-201ENST00000436601 LOC285095A0A1B0GVY8 99 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 TBC1D3BA6NDS4 549 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 SHISA7A6NL88 538 aa7.1□□□□□ -1.27
LSM3P3-201ENST00000436601 ERI2A8K979 691 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms