RNA–Protein interactions for RNA: ENST00000436216.1

EXT1-202, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 3

Gene EXT1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-202ENST00000436216 NSMCE1Q8WV22 266 aa12.48□□□□□ -0.41
EXT1-202ENST00000436216 WRAP53Q9BUR4 548 aaKnown RBP12.48□□□□□ -0.41
EXT1-202ENST00000436216 SCNM1Q9BWG6 230 aa12.48□□□□□ -0.41
EXT1-202ENST00000436216 C1QTNF7Q9BXJ2 289 aa12.48□□□□□ -0.41
EXT1-202ENST00000436216 NOD2Q9HC29 1040 aa12.48□□□□□ -0.41
EXT1-202ENST00000436216 DTLQ9NZJ0 730 aa12.48□□□□□ -0.41
EXT1-202ENST00000436216 AMACRQ9UHK6 382 aa12.48□□□□□ -0.41
EXT1-202ENST00000436216 APOBEC2Q9Y235 224 aaKnown RBP12.48□□□□□ -0.41
EXT1-202ENST00000436216 PCDHGC4Q9Y5F7 938 aa12.48□□□□□ -0.41
EXT1-202ENST00000436216 EPN1Q9Y6I3 576 aaPredicted RBP12.48□□□□□ -0.41
EXT1-202ENST00000436216 LRRK1Q38SD2 2015 aa12.47□□□□□ -0.41
EXT1-202ENST00000436216 SHROOM3Q8TF72 1996 aa12.47□□□□□ -0.41
EXT1-202ENST00000436216 ACACBO00763 2458 aa12.47□□□□□ -0.41
EXT1-202ENST00000436216 LRRD1A4D1F6 860 aa12.47□□□□□ -0.41
EXT1-202ENST00000436216 HYAL3O43820 417 aaPredicted RBP12.47□□□□□ -0.41
EXT1-202ENST00000436216 NDUFA10O95299 355 aa12.47□□□□□ -0.41
EXT1-202ENST00000436216 C6P13671 934 aa12.47□□□□□ -0.41
EXT1-202ENST00000436216 CES1P23141 567 aa12.47□□□□□ -0.41
EXT1-202ENST00000436216 DGKAP23743 735 aa12.47□□□□□ -0.41
EXT1-202ENST00000436216 LIG3P49916 1009 aa12.47□□□□□ -0.41
EXT1-202ENST00000436216 MAXP61244 160 aa12.47□□□□□ -0.41
EXT1-202ENST00000436216 RALGDSQ12967 914 aa12.47□□□□□ -0.41
EXT1-202ENST00000436216 SPA17Q15506 151 aa12.47□□□□□ -0.41
EXT1-202ENST00000436216 WSCD2Q2TBF2 565 aa12.47□□□□□ -0.41
EXT1-202ENST00000436216 TPRG1LQ5T0D9 272 aa12.47□□□□□ -0.41
EXT1-202ENST00000436216 CFAP58Q5T655 872 aa12.47□□□□□ -0.41
EXT1-202ENST00000436216 DPPA4Q7L190 304 aa12.47□□□□□ -0.41
EXT1-202ENST00000436216 PTAR1Q7Z6K3 402 aaPredicted RBP12.47□□□□□ -0.41
EXT1-202ENST00000436216 PNPLA1Q8N8W4 532 aa12.47□□□□□ -0.41
EXT1-202ENST00000436216 HDAC11Q96DB2 347 aa12.47□□□□□ -0.41
EXT1-202ENST00000436216 CNTNAP3BQ96NU0 1288 aa12.47□□□□□ -0.41
EXT1-202ENST00000436216 TMEM121BQ9BXQ6 578 aaPredicted RBP12.47□□□□□ -0.41
EXT1-202ENST00000436216 CNTNAP3Q9BZ76 1288 aa12.47□□□□□ -0.41
EXT1-202ENST00000436216 SCUBE2Q9NQ36 999 aa12.47□□□□□ -0.41
EXT1-202ENST00000436216 MBNL1Q9NR56 388 aaKnown RBP12.47□□□□□ -0.41
EXT1-202ENST00000436216 DDX56Q9NY93 547 aaKnown RBP12.47□□□□□ -0.41
EXT1-202ENST00000436216 SALL4Q9UJQ4 1053 aa12.47□□□□□ -0.41
EXT1-202ENST00000436216 PPIL1Q9Y3C6 166 aa12.47□□□□□ -0.41
EXT1-202ENST00000436216 NEUROG3Q9Y4Z2 214 aa12.47□□□□□ -0.41
EXT1-202ENST00000436216 PCDHGA1Q9Y5H4 931 aa12.47□□□□□ -0.41
EXT1-202ENST00000436216 ALG6Q9Y672 507 aa12.47□□□□□ -0.41
EXT1-202ENST00000436216 FREM2Q5SZK8 3169 aa12.46□□□□□ -0.41
EXT1-202ENST00000436216 SOWAHDA6NJG2 315 aa12.46□□□□□ -0.41
EXT1-202ENST00000436216 FZD6O60353 706 aa12.46□□□□□ -0.41
EXT1-202ENST00000436216 PIAS2O75928 621 aa12.46□□□□□ -0.41
EXT1-202ENST00000436216 MAP3K6O95382 1288 aa12.46□□□□□ -0.41
EXT1-202ENST00000436216 LDOC1O95751 146 aaPredicted RBP12.46□□□□□ -0.41
EXT1-202ENST00000436216 CSF2P04141 144 aa12.46□□□□□ -0.41
EXT1-202ENST00000436216 PRKCGP05129 697 aa12.46□□□□□ -0.41
EXT1-202ENST00000436216 GIMD1P0DJR0 217 aa12.46□□□□□ -0.41
EXT1-202ENST00000436216 CCNB1P14635 433 aa12.46□□□□□ -0.41
EXT1-202ENST00000436216 NME1P15531 152 aaKnown RBP12.46□□□□□ -0.41
EXT1-202ENST00000436216 GM2AP17900 193 aa12.46□□□□□ -0.41
EXT1-202ENST00000436216 SPINK2P20155 84 aa12.46□□□□□ -0.41
EXT1-202ENST00000436216 PEX5P50542 639 aa12.46□□□□□ -0.41
EXT1-202ENST00000436216 HNRNPKP61978 463 aaKnown RBP eCLIP12.46□□□□□ -0.412e-6■■■■■ 27.8
EXT1-202ENST00000436216 TRAF2Q12933 501 aa12.46□□□□□ -0.41
EXT1-202ENST00000436216 IHHQ14623 411 aa12.46□□□□□ -0.41
EXT1-202ENST00000436216 LRRC14Q15048 493 aa12.46□□□□□ -0.41
EXT1-202ENST00000436216 ZFYVE27Q5T4F4 411 aa12.46□□□□□ -0.41
EXT1-202ENST00000436216 LIPIQ6XZB0 460 aa12.46□□□□□ -0.41
EXT1-202ENST00000436216 KDM7AQ6ZMT4 941 aa12.46□□□□□ -0.41
EXT1-202ENST00000436216 PARGQ86W56 976 aa12.46□□□□□ -0.41
EXT1-202ENST00000436216 CHCHD4Q8N4Q1 142 aa12.46□□□□□ -0.41
EXT1-202ENST00000436216 EID2Q8N6I1 236 aa12.46□□□□□ -0.41
EXT1-202ENST00000436216 POLR1EQ9GZS1 481 aaKnown RBP12.46□□□□□ -0.41
EXT1-202ENST00000436216 NT5MQ9NPB1 228 aa12.46□□□□□ -0.41
EXT1-202ENST00000436216 LUC7LQ9NQ29 371 aaKnown RBP12.46□□□□□ -0.41
EXT1-202ENST00000436216 RBM22Q9NW64 420 aaKnown RBP eCLIP12.46□□□□□ -0.41
EXT1-202ENST00000436216 FTSJ1Q9UET6 329 aa12.46□□□□□ -0.41
EXT1-202ENST00000436216 KLF15Q9UIH9 416 aa12.46□□□□□ -0.41
EXT1-202ENST00000436216 PHTF1Q9UMS5 762 aa12.46□□□□□ -0.41
EXT1-202ENST00000436216 TFR2Q9UP52 801 aa12.46□□□□□ -0.41
EXT1-202ENST00000436216 REXO2Q9Y3B8 237 aaKnown RBP12.46□□□□□ -0.41
EXT1-202ENST00000436216 MSRB2Q9Y3D2 182 aa12.46□□□□□ -0.41
EXT1-202ENST00000436216 HYOU1Q9Y4L1 999 aa12.46□□□□□ -0.41
EXT1-202ENST00000436216 CHD8Q9HCK8 2581 aa12.46□□□□□ -0.42
EXT1-202ENST00000436216 CEP295Q9C0D2 2601 aa12.45□□□□□ -0.42
EXT1-202ENST00000436216 RCCD1A6NED2 376 aa12.45□□□□□ -0.42
EXT1-202ENST00000436216 BTNL10A8MVZ5 291 aa12.45□□□□□ -0.42
EXT1-202ENST00000436216 ENC1O14682 589 aa12.45□□□□□ -0.42
EXT1-202ENST00000436216 PSTPIP1O43586 416 aa12.45□□□□□ -0.42
EXT1-202ENST00000436216 SPOPO43791 374 aa12.45□□□□□ -0.42
EXT1-202ENST00000436216 SDC3O75056 442 aa12.45□□□□□ -0.42
EXT1-202ENST00000436216 PGLSO95336 258 aa12.45□□□□□ -0.42
EXT1-202ENST00000436216 C1SP09871 688 aa12.45□□□□□ -0.42
EXT1-202ENST00000436216 ZFXP17010 805 aaPredicted RBP12.45□□□□□ -0.42
EXT1-202ENST00000436216 CDC25BP30305 580 aa12.45□□□□□ -0.42
EXT1-202ENST00000436216 CDKN2BP42772 138 aa12.45□□□□□ -0.42
EXT1-202ENST00000436216 NOP2P46087 812 aaKnown RBP12.45□□□□□ -0.42
EXT1-202ENST00000436216 SEMG2Q02383 582 aa12.45□□□□□ -0.42
EXT1-202ENST00000436216 PPIDQ08752 370 aaKnown RBP12.45□□□□□ -0.42
EXT1-202ENST00000436216 EIF2B5Q13144 721 aaKnown RBP12.45□□□□□ -0.42
EXT1-202ENST00000436216 ZNF211Q13398 564 aaPredicted RBP12.45□□□□□ -0.42
EXT1-202ENST00000436216 PDE1CQ14123 709 aaPredicted RBP12.45□□□□□ -0.42
EXT1-202ENST00000436216 PTK2BQ14289 1009 aa12.45□□□□□ -0.42
EXT1-202ENST00000436216 IRF4Q15306 451 aa12.45□□□□□ -0.42
EXT1-202ENST00000436216 PROX2Q3B8N5 592 aa12.45□□□□□ -0.42
EXT1-202ENST00000436216 C11orf63Q6NUN7 778 aa12.45□□□□□ -0.42
EXT1-202ENST00000436216 MFSD7Q6UXD7 560 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms