RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 TEAD4Q15561 434 aa18.51■□□□□ 0.55
HLA-F-220ENST00000434407 RSPO4Q2I0M5 234 aaPredicted RBP18.51■□□□□ 0.55
HLA-F-220ENST00000434407 LRRC73Q5JTD7 316 aa18.51■□□□□ 0.55
HLA-F-220ENST00000434407 IQCHQ86VS3 1027 aa18.51■□□□□ 0.55
HLA-F-220ENST00000434407 RMDN1Q96DB5 314 aa18.51■□□□□ 0.55
HLA-F-220ENST00000434407 LENG8Q96PV6 779 aaPredicted RBP18.51■□□□□ 0.55
HLA-F-220ENST00000434407 ANKRD6Q9Y2G4 727 aa18.51■□□□□ 0.55
HLA-F-220ENST00000434407 PPIL1Q9Y3C6 166 aa18.51■□□□□ 0.55
HLA-F-220ENST00000434407 PCDHGC4Q9Y5F7 938 aa18.51■□□□□ 0.55
HLA-F-220ENST00000434407 IGLON5A6NGN9 336 aa18.5■□□□□ 0.55
HLA-F-220ENST00000434407 HACD1B0YJ81 288 aa18.5■□□□□ 0.55
HLA-F-220ENST00000434407 SLC31A1O15431 190 aa18.5■□□□□ 0.55
HLA-F-220ENST00000434407 FZD6O60353 706 aa18.5■□□□□ 0.55
HLA-F-220ENST00000434407 HNRNPA2B1P22626 353 aaKnown RBP18.5■□□□□ 0.55
HLA-F-220ENST00000434407 CETN2P41208 172 aa18.5■□□□□ 0.55
HLA-F-220ENST00000434407 DSC2Q02487 901 aa18.5■□□□□ 0.55
HLA-F-220ENST00000434407 OVGP1Q12889 678 aa18.5■□□□□ 0.55
HLA-F-220ENST00000434407 XRCC4Q13426 336 aa18.5■□□□□ 0.55
HLA-F-220ENST00000434407 NOMO1Q15155 1222 aa18.5■□□□□ 0.55
HLA-F-220ENST00000434407 CFAP58Q5T655 872 aa18.5■□□□□ 0.55
HLA-F-220ENST00000434407 AADACL2Q6P093 401 aa18.5■□□□□ 0.55
HLA-F-220ENST00000434407 IL27RAQ6UWB1 636 aa18.5■□□□□ 0.55
HLA-F-220ENST00000434407 MFSD2AQ8NA29 543 aa18.5■□□□□ 0.55
HLA-F-220ENST00000434407 TFB1MQ8WVM0 346 aaKnown RBP18.5■□□□□ 0.55
HLA-F-220ENST00000434407 KLK6Q92876 244 aa18.5■□□□□ 0.55
HLA-F-220ENST00000434407 KCNF1Q9H3M0 494 aa18.5■□□□□ 0.55
HLA-F-220ENST00000434407 LZTFL1Q9NQ48 299 aa18.5■□□□□ 0.55
HLA-F-220ENST00000434407 DNAAF2Q9NVR5 837 aaKnown RBP18.5■□□□□ 0.55
HLA-F-220ENST00000434407 CFAP69A5D8W1 941 aa18.49■□□□□ 0.55
HLA-F-220ENST00000434407 C4orf47A7E2U8 309 aa18.49■□□□□ 0.55
HLA-F-220ENST00000434407 NEMP1O14524 444 aa18.49■□□□□ 0.55
HLA-F-220ENST00000434407 PGLSO95336 258 aa18.49■□□□□ 0.55
HLA-F-220ENST00000434407 MMP2P08253 660 aa18.49■□□□□ 0.55
HLA-F-220ENST00000434407 PRLRP16471 622 aa18.49■□□□□ 0.55
HLA-F-220ENST00000434407 XPAP23025 273 aaPredicted RBP18.49■□□□□ 0.55
HLA-F-220ENST00000434407 PTPN3P26045 913 aa18.49■□□□□ 0.55
HLA-F-220ENST00000434407 CTSKP43235 329 aa18.49■□□□□ 0.55
HLA-F-220ENST00000434407 ITKQ08881 620 aa18.49■□□□□ 0.55
HLA-F-220ENST00000434407 KIF19Q2TAC6 998 aa18.49■□□□□ 0.55
HLA-F-220ENST00000434407 TEX44Q53QW1 395 aa18.49■□□□□ 0.55
HLA-F-220ENST00000434407 MEI1Q5TIA1 1274 aa18.49■□□□□ 0.55
HLA-F-220ENST00000434407 ERAP2Q6P179 960 aa18.49■□□□□ 0.55
HLA-F-220ENST00000434407 LAYNQ6UX15 382 aa18.49■□□□□ 0.55
HLA-F-220ENST00000434407 MINDY1Q8N5J2 469 aa18.49■□□□□ 0.55
HLA-F-220ENST00000434407 ANP32BQ92688 251 aaKnown RBP18.49■□□□□ 0.55
HLA-F-220ENST00000434407 TADA1Q96BN2 335 aa18.49■□□□□ 0.55
HLA-F-220ENST00000434407 QKIQ96PU8 341 aaKnown RBP eCLIP18.49■□□□□ 0.55
HLA-F-220ENST00000434407 KLF6Q99612 283 aaPredicted RBP18.49■□□□□ 0.55
HLA-F-220ENST00000434407 RTKNQ9BST9 563 aa18.49■□□□□ 0.55
HLA-F-220ENST00000434407 AASDHPPTQ9NRN7 309 aa18.49■□□□□ 0.55
HLA-F-220ENST00000434407 CDV3Q9UKY7 258 aaKnown RBP18.49■□□□□ 0.55
HLA-F-220ENST00000434407 RAI2Q9Y5P3 530 aa18.49■□□□□ 0.55
HLA-F-220ENST00000434407 HS3ST3A1Q9Y663 406 aa18.49■□□□□ 0.55
HLA-F-220ENST00000434407 TDRD6O60522 2096 aaKnown RBP18.49■□□□□ 0.55
HLA-F-220ENST00000434407 MTSS1O43312 755 aa18.48■□□□□ 0.55
HLA-F-220ENST00000434407 MMP20O60882 483 aa18.48■□□□□ 0.55
HLA-F-220ENST00000434407 TJP3O95049 919 aa18.48■□□□□ 0.55
HLA-F-220ENST00000434407 PAK4O96013 591 aaPredicted RBP18.48■□□□□ 0.55
HLA-F-220ENST00000434407 PRLP01236 227 aa18.48■□□□□ 0.55
HLA-F-220ENST00000434407 AKT2P31751 481 aa18.48■□□□□ 0.55
HLA-F-220ENST00000434407 WASHC5Q12768 1159 aa18.48■□□□□ 0.55
HLA-F-220ENST00000434407 RALGDSQ12967 914 aa18.48■□□□□ 0.55
HLA-F-220ENST00000434407 KLF1Q13351 362 aaPredicted RBP18.48■□□□□ 0.55
HLA-F-220ENST00000434407 AGERQ15109 404 aa18.48■□□□□ 0.55
HLA-F-220ENST00000434407 B4GALNT4Q76KP1 1039 aa18.48■□□□□ 0.55
HLA-F-220ENST00000434407 DPPA4Q7L190 304 aa18.48■□□□□ 0.55
HLA-F-220ENST00000434407 ABI3BPQ7Z7G0 1075 aa18.48■□□□□ 0.55
HLA-F-220ENST00000434407 ZC3H18Q86VM9 953 aaKnown RBP18.48■□□□□ 0.55
HLA-F-220ENST00000434407 DENND6BQ8NEG7 585 aa18.48■□□□□ 0.55
HLA-F-220ENST00000434407 FAM174AQ8TBP5 190 aa18.48■□□□□ 0.55
HLA-F-220ENST00000434407 ACTL9Q8TC94 416 aa18.48■□□□□ 0.55
HLA-F-220ENST00000434407 CXorf40AQ8TE69 158 aa18.48■□□□□ 0.55
HLA-F-220ENST00000434407 PIH1D2Q8WWB5 315 aa18.48■□□□□ 0.55
HLA-F-220ENST00000434407 SKA1Q96BD8 255 aa18.48■□□□□ 0.55
HLA-F-220ENST00000434407 HAUS1Q96CS2 278 aa18.48■□□□□ 0.55
HLA-F-220ENST00000434407 TEKT5Q96M29 485 aa18.48■□□□□ 0.55
HLA-F-220ENST00000434407 MCCC1Q96RQ3 725 aaPredicted RBP18.48■□□□□ 0.55
HLA-F-220ENST00000434407 GTPBP2Q9BX10 602 aaKnown RBP18.48■□□□□ 0.55
HLA-F-220ENST00000434407 PHTF1Q9UMS5 762 aa18.48■□□□□ 0.55
HLA-F-220ENST00000434407 PCDHB9Q9Y5E1 797 aa18.48■□□□□ 0.55
HLA-F-220ENST00000434407 SNX11Q9Y5W9 270 aa18.48■□□□□ 0.55
HLA-F-220ENST00000434407 TLR4O00206 839 aa18.47■□□□□ 0.55
HLA-F-220ENST00000434407 RAD51BO15315 384 aa18.47■□□□□ 0.55
HLA-F-220ENST00000434407 NEBLO76041 1014 aa18.47■□□□□ 0.55
HLA-F-220ENST00000434407 PRKCGP05129 697 aa18.47■□□□□ 0.55
HLA-F-220ENST00000434407 PDHA1P08559 390 aa18.47■□□□□ 0.55
HLA-F-220ENST00000434407 ZNF883P0CG24 379 aa18.47■□□□□ 0.55
HLA-F-220ENST00000434407 ATXN3P54252 364 aaPredicted RBP18.47■□□□□ 0.55
HLA-F-220ENST00000434407 SKOR1P84550 965 aa18.47■□□□□ 0.55
HLA-F-220ENST00000434407 OTUD4Q01804 1114 aaKnown RBP18.47■□□□□ 0.55
HLA-F-220ENST00000434407 SGCGQ13326 291 aa18.47■□□□□ 0.55
HLA-F-220ENST00000434407 ZNF211Q13398 564 aaPredicted RBP18.47■□□□□ 0.55
HLA-F-220ENST00000434407 PUM1Q14671 1186 aaKnown RBP eCLIP18.47■□□□□ 0.55
HLA-F-220ENST00000434407 STAT4Q14765 748 aa18.47■□□□□ 0.55
HLA-F-220ENST00000434407 SLC14A2Q15849 920 aa18.47■□□□□ 0.55
HLA-F-220ENST00000434407 ZNF423Q2M1K9 1284 aa18.47■□□□□ 0.55
HLA-F-220ENST00000434407 HLA-BQ31612 363 aa18.47■□□□□ 0.55
HLA-F-220ENST00000434407 SLC45A4Q5BKX6 768 aa18.47■□□□□ 0.55
HLA-F-220ENST00000434407 ARMC12Q5T9G4 340 aa18.47■□□□□ 0.55
HLA-F-220ENST00000434407 GCNT7Q6ZNI0 430 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms