RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 SLC39A12Q504Y0 691 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 CNSTQ6PJW8 725 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 RPS27LQ71UM5 84 aaKnown RBP12.7□□□□□ -0.38
CPNE4-201ENST00000429747 HORMAD1Q86X24 394 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 OFCC1Q8IZS5 231 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 CDYL2Q8N8U2 506 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 OR2T34Q8NGX1 318 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 OR2T3Q8NH03 318 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 STAG3L4Q8TBR4 150 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 GIPC3Q8TF64 312 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 ZFAND2BQ8WV99 257 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 C19orf60Q96EN9 201 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 TINF2Q9BSI4 451 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 EURLQ9NYK6 297 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 POLG2Q9UHN1 485 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 CDH9Q9ULB4 789 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 TSC22D4Q9Y3Q8 395 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 HIST1H2AGP0C0S8 130 aaPredicted RBP12.7□□□□□ -0.38
CPNE4-201ENST00000429747 HIST1H2ADP20671 130 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 CDK18Q07002 472 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 DMC1Q14565 340 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 STXBP5Q5T5C0 1151 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 CACHD1Q5VU97 1274 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 KLHDC10Q6PID8 442 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 IL27RAQ6UWB1 636 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 OR56A4Q8NGH8 313 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 HIST1H2AHQ96KK5 128 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 HIST1H2AJQ99878 128 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 H2AFJQ9BTM1 129 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 PLGRKTQ9HBL7 147 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 CATSPERZQ9NTU4 200 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 TIMM22Q9Y584 194 aa12.7□□□□□ -0.38
CPNE4-201ENST00000429747 H3BSA7 217 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 PSMB9P28065 219 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 OXCT1P55809 520 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 DAOAP59103 153 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 SNX17Q15036 470 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 MAPK11Q15759 364 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 RAP1GAP2Q684P5 730 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 DCLRE1AQ6PJP8 1040 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 GPC2Q8N158 579 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 ZNF276Q8N554 614 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 ANKLE1Q8NAG6 615 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 DQX1Q8TE96 717 aaKnown RBP12.69□□□□□ -0.38
CPNE4-201ENST00000429747 CRLS1Q9UJA2 301 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 RAD54BQ9Y620 910 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 SF3B1O75533 1304 aaKnown RBP eCLIP12.69□□□□□ -0.38
CPNE4-201ENST00000429747 E7ENX8 843 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 ZBTB14O43829 449 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 SNNO75324 88 aaPredicted RBP12.69□□□□□ -0.38
CPNE4-201ENST00000429747 AHSGP02765 367 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 ADSLP30566 484 aaPredicted RBP12.69□□□□□ -0.38
CPNE4-201ENST00000429747 CYP2C18P33260 490 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 SLC1A2P43004 574 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 CTC1Q2NKJ3 1217 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 IQSEC1Q6DN90 963 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 FAM45BPQ6NSW5 357 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 GLT6D1Q7Z4J2 308 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 TERB1Q8NA31 727 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 FAM45AQ8TCE6 357 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 TMEM174Q8WUU8 243 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 FAM120BQ96EK7 910 aaKnown RBP12.69□□□□□ -0.38
CPNE4-201ENST00000429747 PCED1BQ96HM7 432 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 FCRL3Q96P31 734 aaPredicted RBP12.69□□□□□ -0.38
CPNE4-201ENST00000429747 ASB2Q96Q27 587 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 RNF39Q9H2S5 420 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 DAPK2Q9UIK4 370 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 ZNF112Q9UJU3 913 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 TCAF1Q9Y4C2 921 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.69□□□□□ -0.38
CPNE4-201ENST00000429747 MATN2O00339 956 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 RAD23AP54725 363 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 ZNF177Q13360 481 aaPredicted RBP12.69□□□□□ -0.38
CPNE4-201ENST00000429747 SZRD1Q7Z422 152 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 TAC4Q86UU9 113 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 ZC3HC1Q86WB0 502 aaKnown RBP12.69□□□□□ -0.38
CPNE4-201ENST00000429747 TP53INP2Q8IXH6 220 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 EXOC2Q96KP1 924 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 DPY30Q9C005 99 aa12.69□□□□□ -0.38
CPNE4-201ENST00000429747 LIN28AQ9H9Z2 209 aaKnown RBP12.69□□□□□ -0.38
CPNE4-201ENST00000429747 DDX28Q9NUL7 540 aaKnown RBP12.69□□□□□ -0.38
CPNE4-201ENST00000429747 DDX60LQ5H9U9 1706 aaKnown RBP12.68□□□□□ -0.38
CPNE4-201ENST00000429747 TPP2P29144 1249 aaPredicted RBP12.68□□□□□ -0.38
CPNE4-201ENST00000429747 SERPINB1P30740 379 aa12.68□□□□□ -0.38
CPNE4-201ENST00000429747 GSSP48637 474 aa12.68□□□□□ -0.38
CPNE4-201ENST00000429747 PTPRNQ16849 979 aa12.68□□□□□ -0.38
CPNE4-201ENST00000429747 CTXN3Q4LDR2 81 aa12.68□□□□□ -0.38
CPNE4-201ENST00000429747 GPSM1Q86YR5 675 aa12.68□□□□□ -0.38
CPNE4-201ENST00000429747 CROCCP3Q8IVE0 287 aa12.68□□□□□ -0.38
CPNE4-201ENST00000429747 OR9I1Q8NGQ6 314 aa12.68□□□□□ -0.38
CPNE4-201ENST00000429747 POLR1EQ9GZS1 481 aaKnown RBP12.68□□□□□ -0.38
CPNE4-201ENST00000429747 CLPBQ9H078 707 aa12.68□□□□□ -0.38
CPNE4-201ENST00000429747 KLHL25Q9H0H3 589 aa12.68□□□□□ -0.38
CPNE4-201ENST00000429747 SCUBE2Q9NQ36 999 aa12.68□□□□□ -0.38
CPNE4-201ENST00000429747 AIF1P55008 147 aa12.68□□□□□ -0.38
CPNE4-201ENST00000429747 GALNT3Q14435 633 aa12.68□□□□□ -0.38
CPNE4-201ENST00000429747 TRMOQ9BU70 441 aa12.68□□□□□ -0.38
CPNE4-201ENST00000429747 C20orf27Q9GZN8 174 aa12.68□□□□□ -0.38
CPNE4-201ENST00000429747 FBXW11Q9UKB1 542 aa12.68□□□□□ -0.38
CPNE4-201ENST00000429747 SLC8A2Q9UPR5 921 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms