RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 MMP13P45452 471 aa18.22■□□□□ 0.51
SSR4P1-202ENST00000429427 LIG3P49916 1009 aa18.22■□□□□ 0.51
SSR4P1-202ENST00000429427 RENBPP51606 427 aa18.22■□□□□ 0.51
SSR4P1-202ENST00000429427 SUOXP51687 545 aa18.22■□□□□ 0.51
SSR4P1-202ENST00000429427 BCL2L1Q07817 233 aa18.22■□□□□ 0.51
SSR4P1-202ENST00000429427 ELP6Q0PNE2 266 aa18.22■□□□□ 0.51
SSR4P1-202ENST00000429427 TRAF2Q12933 501 aa18.22■□□□□ 0.51
SSR4P1-202ENST00000429427 DNAJC3Q13217 504 aa18.22■□□□□ 0.51
SSR4P1-202ENST00000429427 PTPRRQ15256 657 aa18.22■□□□□ 0.51
SSR4P1-202ENST00000429427 IRF4Q15306 451 aa18.22■□□□□ 0.51
SSR4P1-202ENST00000429427 WSCD2Q2TBF2 565 aa18.22■□□□□ 0.51
SSR4P1-202ENST00000429427 FAM182AQ5T1J6 154 aa18.22■□□□□ 0.51
SSR4P1-202ENST00000429427 MAML1Q92585 1016 aa18.22■□□□□ 0.51
SSR4P1-202ENST00000429427 RNF157Q96PX1 679 aa18.22■□□□□ 0.51
SSR4P1-202ENST00000429427 DTLQ9NZJ0 730 aa18.22■□□□□ 0.51
SSR4P1-202ENST00000429427 FTSJ1Q9UET6 329 aa18.22■□□□□ 0.51
SSR4P1-202ENST00000429427 SHROOM3Q8TF72 1996 aa18.22■□□□□ 0.51
SSR4P1-202ENST00000429427 LRRD1A4D1F6 860 aa18.21■□□□□ 0.51
SSR4P1-202ENST00000429427 FAM221BA6H8Z2 402 aa18.21■□□□□ 0.51
SSR4P1-202ENST00000429427 RCCD1A6NED2 376 aa18.21■□□□□ 0.51
SSR4P1-202ENST00000429427 SOWAHDA6NJG2 315 aa18.21■□□□□ 0.51
SSR4P1-202ENST00000429427 PIAS2O75928 621 aa18.21■□□□□ 0.51
SSR4P1-202ENST00000429427 TRIM16O95361 564 aa18.21■□□□□ 0.51
SSR4P1-202ENST00000429427 COMTP21964 271 aa18.21■□□□□ 0.51
SSR4P1-202ENST00000429427 HSPA9P38646 679 aaKnown RBP18.21■□□□□ 0.51
SSR4P1-202ENST00000429427 RABIFP47224 123 aa18.21■□□□□ 0.51
SSR4P1-202ENST00000429427 EIF2B5Q13144 721 aaKnown RBP18.21■□□□□ 0.51
SSR4P1-202ENST00000429427 PDE1CQ14123 709 aaPredicted RBP18.21■□□□□ 0.51
SSR4P1-202ENST00000429427 MARC1Q5VT66 337 aa18.21■□□□□ 0.51
SSR4P1-202ENST00000429427 MARCH9Q86YJ5 346 aa18.21■□□□□ 0.51
SSR4P1-202ENST00000429427 TSGA13Q96PP4 275 aa18.21■□□□□ 0.51
SSR4P1-202ENST00000429427 NT5MQ9NPB1 228 aa18.21■□□□□ 0.51
SSR4P1-202ENST00000429427 SALL4Q9UJQ4 1053 aa18.21■□□□□ 0.51
SSR4P1-202ENST00000429427 APOBEC2Q9Y235 224 aaKnown RBP18.21■□□□□ 0.51
SSR4P1-202ENST00000429427 REXO2Q9Y3B8 237 aaKnown RBP18.21■□□□□ 0.51
SSR4P1-202ENST00000429427 NEUROG3Q9Y4Z2 214 aa18.21■□□□□ 0.51
SSR4P1-202ENST00000429427 DMXL2Q8TDJ6 3036 aa18.2■□□□□ 0.5
SSR4P1-202ENST00000429427 NME1P15531 152 aaKnown RBP18.2■□□□□ 0.5
SSR4P1-202ENST00000429427 XPAP23025 273 aaPredicted RBP18.2■□□□□ 0.5
SSR4P1-202ENST00000429427 MAGEA1P43355 309 aa18.2■□□□□ 0.5
SSR4P1-202ENST00000429427 HADHBP55084 474 aaKnown RBP18.2■□□□□ 0.5
SSR4P1-202ENST00000429427 AGERQ15109 404 aa18.2■□□□□ 0.5
SSR4P1-202ENST00000429427 PROX2Q3B8N5 592 aa18.2■□□□□ 0.5
SSR4P1-202ENST00000429427 INAVAQ3KP66 663 aa18.2■□□□□ 0.5
SSR4P1-202ENST00000429427 CFAP58Q5T655 872 aa18.2■□□□□ 0.5
SSR4P1-202ENST00000429427 LRRC38Q5VT99 294 aa18.2■□□□□ 0.5
SSR4P1-202ENST00000429427 KCTD16Q68DU8 428 aa18.2■□□□□ 0.5
SSR4P1-202ENST00000429427 SLC9A4Q6AI14 798 aa18.2■□□□□ 0.5
SSR4P1-202ENST00000429427 ALG1LQ6GMV1 187 aa18.2■□□□□ 0.5
SSR4P1-202ENST00000429427 ERAP2Q6P179 960 aa18.2■□□□□ 0.5
SSR4P1-202ENST00000429427 LIPIQ6XZB0 460 aa18.2■□□□□ 0.5
SSR4P1-202ENST00000429427 DPPA4Q7L190 304 aa18.2■□□□□ 0.5
SSR4P1-202ENST00000429427 PARGQ86W56 976 aa18.2■□□□□ 0.5
SSR4P1-202ENST00000429427 LRRC49Q8IUZ0 686 aa18.2■□□□□ 0.5
SSR4P1-202ENST00000429427 MAP7D3Q8IWC1 876 aa18.2■□□□□ 0.5
SSR4P1-202ENST00000429427 PELI3Q8N2H9 469 aa18.2■□□□□ 0.5
SSR4P1-202ENST00000429427 FAM174AQ8TBP5 190 aa18.2■□□□□ 0.5
SSR4P1-202ENST00000429427 FUBP1Q96AE4 644 aaKnown RBP18.2■□□□□ 0.5
SSR4P1-202ENST00000429427 IFT43Q96FT9 208 aa18.2■□□□□ 0.5
SSR4P1-202ENST00000429427 CNDP2Q96KP4 475 aaKnown RBP18.2■□□□□ 0.5
SSR4P1-202ENST00000429427 SMIM14Q96QK8 99 aa18.2■□□□□ 0.5
SSR4P1-202ENST00000429427 PANX2Q96RD6 677 aa18.2■□□□□ 0.5
SSR4P1-202ENST00000429427 TCEAL2Q9H3H9 227 aaPredicted RBP18.2■□□□□ 0.5
SSR4P1-202ENST00000429427 SCUBE2Q9NQ36 999 aa18.2■□□□□ 0.5
SSR4P1-202ENST00000429427 DNAJC28Q9NX36 388 aa18.2■□□□□ 0.5
SSR4P1-202ENST00000429427 PCDHA13Q9Y5I0 950 aa18.2■□□□□ 0.5
SSR4P1-202ENST00000429427 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.19■□□□□ 0.5
SSR4P1-202ENST00000429427 A8MX80 341 aa18.19■□□□□ 0.5
SSR4P1-202ENST00000429427 ZNF487B1APH4 448 aa18.19■□□□□ 0.5
SSR4P1-202ENST00000429427 ENC1O14682 589 aa18.19■□□□□ 0.5
SSR4P1-202ENST00000429427 MATN3O15232 486 aa18.19■□□□□ 0.5
SSR4P1-202ENST00000429427 SIGLEC6O43699 453 aa18.19■□□□□ 0.5
SSR4P1-202ENST00000429427 SOCS5O75159 536 aa18.19■□□□□ 0.5
SSR4P1-202ENST00000429427 NEBLO76041 1014 aa18.19■□□□□ 0.5
SSR4P1-202ENST00000429427 CSF2P04141 144 aa18.19■□□□□ 0.5
SSR4P1-202ENST00000429427 KRT1P04264 644 aa18.19■□□□□ 0.5
SSR4P1-202ENST00000429427 MARCKSL1P49006 195 aa18.19■□□□□ 0.5
SSR4P1-202ENST00000429427 ACADVLP49748 655 aa18.19■□□□□ 0.5
SSR4P1-202ENST00000429427 CLDN6P56747 220 aa18.19■□□□□ 0.5
SSR4P1-202ENST00000429427 RAD9BQ6WBX8 426 aa18.19■□□□□ 0.5
SSR4P1-202ENST00000429427 DCP2Q8IU60 420 aaKnown RBP18.19■□□□□ 0.5
SSR4P1-202ENST00000429427 CCDC170Q8IYT3 715 aa18.19■□□□□ 0.5
SSR4P1-202ENST00000429427 RBFAQ8N0V3 343 aa18.19■□□□□ 0.5
SSR4P1-202ENST00000429427 PLA2G15Q8NCC3 412 aa18.19■□□□□ 0.5
SSR4P1-202ENST00000429427 FATE1Q969F0 183 aa18.19■□□□□ 0.5
SSR4P1-202ENST00000429427 LGMNQ99538 433 aa18.19■□□□□ 0.5
SSR4P1-202ENST00000429427 B4GALT6Q9UBX8 382 aa18.19■□□□□ 0.5
SSR4P1-202ENST00000429427 MSRB2Q9Y3D2 182 aa18.19■□□□□ 0.5
SSR4P1-202ENST00000429427 PTPRBP23467 1997 aa18.19■□□□□ 0.5
SSR4P1-202ENST00000429427 PLXNB3Q9ULL4 1909 aa18.18■□□□□ 0.5
SSR4P1-202ENST00000429427 LY6G6EA0A0G2JKS1 128 aa18.18■□□□□ 0.5
SSR4P1-202ENST00000429427 A0A0U1RQS6 177 aa18.18■□□□□ 0.5
SSR4P1-202ENST00000429427 FZD6O60353 706 aa18.18■□□□□ 0.5
SSR4P1-202ENST00000429427 LDOC1O95751 146 aaPredicted RBP18.18■□□□□ 0.5
SSR4P1-202ENST00000429427 HLA-DQB2P05538 268 aa18.18■□□□□ 0.5
SSR4P1-202ENST00000429427 PDHA1P08559 390 aa18.18■□□□□ 0.5
SSR4P1-202ENST00000429427 LHCGRP22888 699 aa18.18■□□□□ 0.5
SSR4P1-202ENST00000429427 CCNCP24863 283 aa18.18■□□□□ 0.5
SSR4P1-202ENST00000429427 SLC1A1P43005 524 aa18.18■□□□□ 0.5
SSR4P1-202ENST00000429427 DSC2Q02487 901 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms