RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 LRRC14Q15048 493 aa18.54■□□□□ 0.56
PSPC1-202ENST00000427943 WSCD2Q2TBF2 565 aa18.54■□□□□ 0.56
PSPC1-202ENST00000427943 DEFB133Q30KQ1 61 aa18.54■□□□□ 0.56
PSPC1-202ENST00000427943 MACC1Q6ZN28 852 aa18.54■□□□□ 0.56
PSPC1-202ENST00000427943 PHACTR4Q8IZ21 702 aa18.54■□□□□ 0.56
PSPC1-202ENST00000427943 ZNF564Q8TBZ8 553 aaPredicted RBP18.54■□□□□ 0.56
PSPC1-202ENST00000427943 TEKT4Q8WW24 435 aa18.54■□□□□ 0.56
PSPC1-202ENST00000427943 SEPT3Q9UH03 358 aa18.54■□□□□ 0.56
PSPC1-202ENST00000427943 NENFQ9UMX5 172 aa18.54■□□□□ 0.56
PSPC1-202ENST00000427943 U3KQA8 63 aa18.54■□□□□ 0.56
PSPC1-202ENST00000427943 ASXL3Q9C0F0 2248 aa18.54■□□□□ 0.56
PSPC1-202ENST00000427943 PCCBP05166 539 aa18.53■□□□□ 0.56
PSPC1-202ENST00000427943 CKMT1AP12532 417 aa18.53■□□□□ 0.56
PSPC1-202ENST00000427943 CDH6P55285 790 aa18.53■□□□□ 0.56
PSPC1-202ENST00000427943 RP1P56715 2156 aa18.53■□□□□ 0.56
PSPC1-202ENST00000427943 YPEL5P62699 121 aa18.53■□□□□ 0.56
PSPC1-202ENST00000427943 MMRN1Q13201 1228 aa18.53■□□□□ 0.56
PSPC1-202ENST00000427943 C1orf61Q13536 156 aa18.53■□□□□ 0.56
PSPC1-202ENST00000427943 KRT81Q14533 505 aa18.53■□□□□ 0.56
PSPC1-202ENST00000427943 ZNF235Q14590 738 aa18.53■□□□□ 0.56
PSPC1-202ENST00000427943 ATPAF2Q8N5M1 289 aa18.53■□□□□ 0.56
PSPC1-202ENST00000427943 ECHDC3Q96DC8 303 aa18.53■□□□□ 0.56
PSPC1-202ENST00000427943 NXPE2Q96DL1 559 aa18.53■□□□□ 0.56
PSPC1-202ENST00000427943 PSKH2Q96QS6 385 aa18.53■□□□□ 0.56
PSPC1-202ENST00000427943 LRRC61Q9BV99 259 aa18.53■□□□□ 0.56
PSPC1-202ENST00000427943 DUSP23Q9BVJ7 150 aa18.53■□□□□ 0.56
PSPC1-202ENST00000427943 DKK4Q9UBT3 224 aa18.53■□□□□ 0.56
PSPC1-202ENST00000427943 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.53■□□□□ 0.565e-8■■■□□ 19.1
PSPC1-202ENST00000427943 ITPR1Q14643 2758 aa18.52■□□□□ 0.56
PSPC1-202ENST00000427943 MYO1FO00160 1098 aa18.52■□□□□ 0.56
PSPC1-202ENST00000427943 LZTS3O60299 673 aaPredicted RBP18.52■□□□□ 0.56
PSPC1-202ENST00000427943 MAFKO60675 156 aa18.52■□□□□ 0.56
PSPC1-202ENST00000427943 PEX11BO96011 259 aa18.52■□□□□ 0.56
PSPC1-202ENST00000427943 TPM3P06753 285 aa18.52■□□□□ 0.56
PSPC1-202ENST00000427943 CD48P09326 243 aa18.52■□□□□ 0.56
PSPC1-202ENST00000427943 RENBPP51606 427 aa18.52■□□□□ 0.56
PSPC1-202ENST00000427943 AP1S1P61966 158 aa18.52■□□□□ 0.56
PSPC1-202ENST00000427943 RALGDSQ12967 914 aa18.52■□□□□ 0.56
PSPC1-202ENST00000427943 TCEA2Q15560 299 aa18.52■□□□□ 0.56
PSPC1-202ENST00000427943 PRRT3Q5FWE3 981 aa18.52■□□□□ 0.56
PSPC1-202ENST00000427943 FAXCQ5TGI0 409 aa18.52■□□□□ 0.56
PSPC1-202ENST00000427943 ZCCHC8Q6NZY4 707 aaKnown RBP18.52■□□□□ 0.56
PSPC1-202ENST00000427943 C19orf48Q6RUI8 117 aa18.52■□□□□ 0.56
PSPC1-202ENST00000427943 NYAP1Q6ZVC0 841 aa18.52■□□□□ 0.56
PSPC1-202ENST00000427943 PGBD5Q8N414 524 aa18.52■□□□□ 0.56
PSPC1-202ENST00000427943 BTN2A2Q8WVV5 523 aa18.52■□□□□ 0.56
PSPC1-202ENST00000427943 ZNF599Q96NL3 588 aa18.52■□□□□ 0.56
PSPC1-202ENST00000427943 PACSIN1Q9BY11 444 aa18.52■□□□□ 0.56
PSPC1-202ENST00000427943 SPASTQ9UBP0 616 aa18.52■□□□□ 0.56
PSPC1-202ENST00000427943 CLCA2Q9UQC9 943 aa18.52■□□□□ 0.56
PSPC1-202ENST00000427943 CSNK1G3Q9Y6M4 447 aa18.52■□□□□ 0.56
PSPC1-202ENST00000427943 NBEAQ8NFP9 2946 aa18.51■□□□□ 0.55
PSPC1-202ENST00000427943 A8MX80 341 aa18.51■□□□□ 0.55
PSPC1-202ENST00000427943 TRAFD1O14545 582 aaPredicted RBP18.51■□□□□ 0.55
PSPC1-202ENST00000427943 GCATO75600 419 aa18.51■□□□□ 0.55
PSPC1-202ENST00000427943 SERPINB6P35237 376 aa18.51■□□□□ 0.55
PSPC1-202ENST00000427943 MAXP61244 160 aa18.51■□□□□ 0.55
PSPC1-202ENST00000427943 PPARDQ03181 441 aa18.51■□□□□ 0.55
PSPC1-202ENST00000427943 NSUN2Q08J23 767 aaKnown RBP eCLIP18.51■□□□□ 0.55
PSPC1-202ENST00000427943 CDKN3Q16667 212 aa18.51■□□□□ 0.55
PSPC1-202ENST00000427943 SKOR2Q2VWA4 1001 aaPredicted RBP18.51■□□□□ 0.55
PSPC1-202ENST00000427943 FAM181AQ8N9Y4 354 aa18.51■□□□□ 0.55
PSPC1-202ENST00000427943 IFI44Q8TCB0 444 aa18.51■□□□□ 0.55
PSPC1-202ENST00000427943 PDCD6IPQ8WUM4 868 aaKnown RBP18.51■□□□□ 0.55
PSPC1-202ENST00000427943 RFFLQ8WZ73 363 aa18.51■□□□□ 0.55
PSPC1-202ENST00000427943 IL12RB2Q99665 862 aa18.51■□□□□ 0.55
PSPC1-202ENST00000427943 SLC13A1Q9BZW2 595 aa18.51■□□□□ 0.55
PSPC1-202ENST00000427943 CTTNBP2NLQ9P2B4 639 aa18.51■□□□□ 0.55
PSPC1-202ENST00000427943 LHX6Q9UPM6 363 aa18.51■□□□□ 0.55
PSPC1-202ENST00000427943 GPSM3Q9Y4H4 160 aa18.51■□□□□ 0.55
PSPC1-202ENST00000427943 OR1A2Q9Y585 309 aa18.51■□□□□ 0.55
PSPC1-202ENST00000427943 PCDHGC4Q9Y5F7 938 aa18.51■□□□□ 0.55
PSPC1-202ENST00000427943 ZFYVE26Q68DK2 2539 aa18.51■□□□□ 0.55
PSPC1-202ENST00000427943 CELSR3Q9NYQ7 3312 aa18.5■□□□□ 0.55
PSPC1-202ENST00000427943 URB1O60287 2271 aaKnown RBP18.5■□□□□ 0.55
PSPC1-202ENST00000427943 TOR1BO14657 336 aa18.5■□□□□ 0.55
PSPC1-202ENST00000427943 MFSD11O43934 449 aa18.5■□□□□ 0.55
PSPC1-202ENST00000427943 MT-CO3P00414 261 aa18.5■□□□□ 0.55
PSPC1-202ENST00000427943 CELA2BP08218 269 aaPredicted RBP18.5■□□□□ 0.55
PSPC1-202ENST00000427943 ELFN1P0C7U0 828 aa18.5■□□□□ 0.55
PSPC1-202ENST00000427943 HNRNPH3P31942 346 aaKnown RBP18.5■□□□□ 0.55
PSPC1-202ENST00000427943 ADKP55263 362 aaKnown RBP18.5■□□□□ 0.55
PSPC1-202ENST00000427943 E2F1Q01094 437 aa18.5■□□□□ 0.55
PSPC1-202ENST00000427943 INPP5AQ14642 412 aa18.5■□□□□ 0.55
PSPC1-202ENST00000427943 NFATC4Q14934 902 aa18.5■□□□□ 0.55
PSPC1-202ENST00000427943 HADHQ16836 314 aaKnown RBP18.5■□□□□ 0.55
PSPC1-202ENST00000427943 ATP13A4Q4VNC1 1196 aa18.5■□□□□ 0.55
PSPC1-202ENST00000427943 SPECC1LQ69YQ0 1117 aa18.5■□□□□ 0.55
PSPC1-202ENST00000427943 GUSBP11Q6P575 273 aa18.5■□□□□ 0.55
PSPC1-202ENST00000427943 LIPIQ6XZB0 460 aa18.5■□□□□ 0.55
PSPC1-202ENST00000427943 DPPA4Q7L190 304 aa18.5■□□□□ 0.55
PSPC1-202ENST00000427943 DCBLD1Q8N8Z6 715 aa18.5■□□□□ 0.55
PSPC1-202ENST00000427943 PLA2G15Q8NCC3 412 aa18.5■□□□□ 0.55
PSPC1-202ENST00000427943 TSACCQ96A04 125 aaPredicted RBP18.5■□□□□ 0.55
PSPC1-202ENST00000427943 APOOQ9BUR5 198 aa18.5■□□□□ 0.55
PSPC1-202ENST00000427943 SCUBE2Q9NQ36 999 aa18.5■□□□□ 0.55
PSPC1-202ENST00000427943 EVA1BQ9NVM1 165 aa18.5■□□□□ 0.55
PSPC1-202ENST00000427943 AK5Q9Y6K8 562 aa18.5■□□□□ 0.55
PSPC1-202ENST00000427943 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.49■□□□□ 0.55
PSPC1-202ENST00000427943 CPED1A4D0V7 1026 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms