RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 PTK2BQ14289 1009 aa18.59■□□□□ 0.57
MSH5-207ENST00000425703 FZD2Q14332 565 aa18.59■□□□□ 0.57
MSH5-207ENST00000425703 SLC9A4Q6AI14 798 aa18.59■□□□□ 0.57
MSH5-207ENST00000425703 SLCO6A1Q86UG4 719 aa18.59■□□□□ 0.57
MSH5-207ENST00000425703 PARGQ86W56 976 aa18.59■□□□□ 0.57
MSH5-207ENST00000425703 TP53I13Q8NBR0 393 aaPredicted RBP18.59■□□□□ 0.57
MSH5-207ENST00000425703 HDAC11Q96DB2 347 aa18.59■□□□□ 0.57
MSH5-207ENST00000425703 NSMCE3Q96MG7 304 aa18.59■□□□□ 0.57
MSH5-207ENST00000425703 ZNF830Q96NB3 372 aaPredicted RBP18.59■□□□□ 0.57
MSH5-207ENST00000425703 SCNM1Q9BWG6 230 aa18.59■□□□□ 0.57
MSH5-207ENST00000425703 POLR1EQ9GZS1 481 aaKnown RBP18.59■□□□□ 0.57
MSH5-207ENST00000425703 NOD2Q9HC29 1040 aa18.59■□□□□ 0.57
MSH5-207ENST00000425703 DTLQ9NZJ0 730 aa18.59■□□□□ 0.57
MSH5-207ENST00000425703 EPN1Q9Y6I3 576 aaPredicted RBP18.59■□□□□ 0.57
MSH5-207ENST00000425703 COL5A1P20908 1838 aaPredicted RBP18.58■□□□□ 0.57
MSH5-207ENST00000425703 PSTPIP1O43586 416 aa18.58■□□□□ 0.56
MSH5-207ENST00000425703 SPOPO43791 374 aa18.58■□□□□ 0.56
MSH5-207ENST00000425703 HYAL3O43820 417 aaPredicted RBP18.58■□□□□ 0.56
MSH5-207ENST00000425703 CSF2P04141 144 aa18.58■□□□□ 0.56
MSH5-207ENST00000425703 ATXN1LP0C7T5 689 aaKnown RBP18.58■□□□□ 0.56
MSH5-207ENST00000425703 CDK4P11802 303 aa18.58■□□□□ 0.56
MSH5-207ENST00000425703 NME1P15531 152 aaKnown RBP18.58■□□□□ 0.56
MSH5-207ENST00000425703 ZFXP17010 805 aaPredicted RBP18.58■□□□□ 0.56
MSH5-207ENST00000425703 COMTP21964 271 aa18.58■□□□□ 0.56
MSH5-207ENST00000425703 IGFALSP35858 605 aa18.58■□□□□ 0.56
MSH5-207ENST00000425703 LIG3P49916 1009 aa18.58■□□□□ 0.56
MSH5-207ENST00000425703 HNRNPKP61978 463 aaKnown RBP eCLIP18.58■□□□□ 0.564e-9■■■□□ 17.3
MSH5-207ENST00000425703 GBE1Q04446 702 aa18.58■□□□□ 0.56
MSH5-207ENST00000425703 PDE1CQ14123 709 aaPredicted RBP18.58■□□□□ 0.56
MSH5-207ENST00000425703 LRRC14Q15048 493 aa18.58■□□□□ 0.56
MSH5-207ENST00000425703 DPPA4Q7L190 304 aa18.58■□□□□ 0.56
MSH5-207ENST00000425703 EID2Q8N6I1 236 aa18.58■□□□□ 0.56
MSH5-207ENST00000425703 PAF1Q8N7H5 531 aa18.58■□□□□ 0.56
MSH5-207ENST00000425703 PLD5Q8N7P1 536 aa18.58■□□□□ 0.56
MSH5-207ENST00000425703 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.58■□□□□ 0.56
MSH5-207ENST00000425703 CNTNAP3BQ96NU0 1288 aa18.58■□□□□ 0.56
MSH5-207ENST00000425703 CNTNAP3Q9BZ76 1288 aa18.58■□□□□ 0.56
MSH5-207ENST00000425703 PCDHGC4Q9Y5F7 938 aa18.58■□□□□ 0.56
MSH5-207ENST00000425703 PCDHGA1Q9Y5H4 931 aa18.58■□□□□ 0.56
MSH5-207ENST00000425703 PIAS2O75928 621 aa18.57■□□□□ 0.56
MSH5-207ENST00000425703 NDUFA10O95299 355 aa18.57■□□□□ 0.56
MSH5-207ENST00000425703 IPO7O95373 1038 aaKnown RBP18.57■□□□□ 0.56
MSH5-207ENST00000425703 LDOC1O95751 146 aaPredicted RBP18.57■□□□□ 0.56
MSH5-207ENST00000425703 C1SP09871 688 aa18.57■□□□□ 0.56
MSH5-207ENST00000425703 DGKAP23743 735 aa18.57■□□□□ 0.56
MSH5-207ENST00000425703 NOP2P46087 812 aaKnown RBP18.57■□□□□ 0.56
MSH5-207ENST00000425703 PEX5P50542 639 aa18.57■□□□□ 0.56
MSH5-207ENST00000425703 SLC10A2Q12908 348 aaPredicted RBP18.57■□□□□ 0.56
MSH5-207ENST00000425703 RALGDSQ12967 914 aa18.57■□□□□ 0.56
MSH5-207ENST00000425703 ZNF211Q13398 564 aaPredicted RBP18.57■□□□□ 0.56
MSH5-207ENST00000425703 ODF2Q5BJF6 829 aa18.57■□□□□ 0.56
MSH5-207ENST00000425703 C11orf63Q6NUN7 778 aa18.57■□□□□ 0.56
MSH5-207ENST00000425703 SLC25A45Q8N413 288 aa18.57■□□□□ 0.56
MSH5-207ENST00000425703 CHCHD4Q8N4Q1 142 aa18.57■□□□□ 0.56
MSH5-207ENST00000425703 CNDP2Q96KP4 475 aaKnown RBP18.57■□□□□ 0.56
MSH5-207ENST00000425703 MAK16Q9BXY0 300 aaKnown RBP18.57■□□□□ 0.56
MSH5-207ENST00000425703 NT5MQ9NPB1 228 aa18.57■□□□□ 0.56
MSH5-207ENST00000425703 PHTF1Q9UMS5 762 aa18.57■□□□□ 0.56
MSH5-207ENST00000425703 MSRB2Q9Y3D2 182 aa18.57■□□□□ 0.56
MSH5-207ENST00000425703 ALG6Q9Y672 507 aa18.57■□□□□ 0.56
MSH5-207ENST00000425703 TTC24A2A3L6 582 aaPredicted RBP18.56■□□□□ 0.56
MSH5-207ENST00000425703 NEMP2A6NFY4 417 aa18.56■□□□□ 0.56
MSH5-207ENST00000425703 H3BM21 787 aa18.56■□□□□ 0.56
MSH5-207ENST00000425703 ENC1O14682 589 aa18.56■□□□□ 0.56
MSH5-207ENST00000425703 APOL1O14791 398 aa18.56■□□□□ 0.56
MSH5-207ENST00000425703 LZTS3O60299 673 aaPredicted RBP18.56■□□□□ 0.56
MSH5-207ENST00000425703 SDC3O75056 442 aa18.56■□□□□ 0.56
MSH5-207ENST00000425703 PGLSO95336 258 aa18.56■□□□□ 0.56
MSH5-207ENST00000425703 TOP3BO95985 862 aaKnown RBP18.56■□□□□ 0.56
MSH5-207ENST00000425703 KRT1P04264 644 aa18.56■□□□□ 0.56
MSH5-207ENST00000425703 ELFN1P0C7U0 828 aa18.56■□□□□ 0.56
MSH5-207ENST00000425703 CCNB1P14635 433 aa18.56■□□□□ 0.56
MSH5-207ENST00000425703 CDC25BP30305 580 aa18.56■□□□□ 0.56
MSH5-207ENST00000425703 THOP1P52888 689 aa18.56■□□□□ 0.56
MSH5-207ENST00000425703 MAXP61244 160 aa18.56■□□□□ 0.56
MSH5-207ENST00000425703 PPIDQ08752 370 aaKnown RBP18.56■□□□□ 0.56
MSH5-207ENST00000425703 TRAF2Q12933 501 aa18.56■□□□□ 0.56
MSH5-207ENST00000425703 WSCD2Q2TBF2 565 aa18.56■□□□□ 0.56
MSH5-207ENST00000425703 LIPIQ6XZB0 460 aa18.56■□□□□ 0.56
MSH5-207ENST00000425703 CCDC13Q8IYE1 715 aa18.56■□□□□ 0.56
MSH5-207ENST00000425703 PNPLA1Q8N8W4 532 aa18.56■□□□□ 0.56
MSH5-207ENST00000425703 BTN2A2Q8WVV5 523 aa18.56■□□□□ 0.56
MSH5-207ENST00000425703 TBATAQ96M53 351 aa18.56■□□□□ 0.56
MSH5-207ENST00000425703 SEMA3CQ99985 751 aa18.56■□□□□ 0.56
MSH5-207ENST00000425703 BRD8Q9H0E9 1235 aa18.56■□□□□ 0.56
MSH5-207ENST00000425703 MBNL1Q9NR56 388 aaKnown RBP18.56■□□□□ 0.56
MSH5-207ENST00000425703 RBM22Q9NW64 420 aaKnown RBP eCLIP18.56■□□□□ 0.56
MSH5-207ENST00000425703 DNAJC28Q9NX36 388 aa18.56■□□□□ 0.56
MSH5-207ENST00000425703 KCTD5Q9NXV2 234 aa18.56■□□□□ 0.56
MSH5-207ENST00000425703 IMPACTQ9P2X3 320 aa18.56■□□□□ 0.56
MSH5-207ENST00000425703 PPIL1Q9Y3C6 166 aa18.56■□□□□ 0.56
MSH5-207ENST00000425703 CSNK1G3Q9Y6M4 447 aa18.56■□□□□ 0.56
MSH5-207ENST00000425703 TP53BP1Q12888 1972 aaPredicted RBP18.55■□□□□ 0.56
MSH5-207ENST00000425703 SOWAHDA6NJG2 315 aa18.55■□□□□ 0.56
MSH5-207ENST00000425703 MAP3K6O95382 1288 aa18.55■□□□□ 0.56
MSH5-207ENST00000425703 CPP00450 1065 aa18.55■□□□□ 0.56
MSH5-207ENST00000425703 PRKCGP05129 697 aa18.55■□□□□ 0.56
MSH5-207ENST00000425703 KRT10P13645 584 aa18.55■□□□□ 0.56
MSH5-207ENST00000425703 ILKQ13418 452 aa18.55■□□□□ 0.56
MSH5-207ENST00000425703 IRF4Q15306 451 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms