RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 LOC285095A0A1B0GVY8 99 aa13.52□□□□□ -0.24
PRPF39-202ENST00000424478 NPIPB15A6NHN6 443 aaPredicted RBP13.52□□□□□ -0.24
PRPF39-202ENST00000424478 HSPA9P38646 679 aaKnown RBP13.52□□□□□ -0.24
PRPF39-202ENST00000424478 COPAP53621 1224 aa13.52□□□□□ -0.24
PRPF39-202ENST00000424478 SATB1Q01826 763 aa13.52□□□□□ -0.24
PRPF39-202ENST00000424478 ELAVL3Q14576 367 aaKnown RBP13.52□□□□□ -0.24
PRPF39-202ENST00000424478 PCGF5Q86SE9 256 aa13.52□□□□□ -0.24
PRPF39-202ENST00000424478 SPNS2Q8IVW8 549 aa13.52□□□□□ -0.24
PRPF39-202ENST00000424478 MDGA1Q8NFP4 955 aa13.52□□□□□ -0.24
PRPF39-202ENST00000424478 OR8D1Q8WZ84 308 aa13.52□□□□□ -0.24
PRPF39-202ENST00000424478 MFSD3Q96ES6 412 aa13.52□□□□□ -0.24
PRPF39-202ENST00000424478 CASS4Q9NQ75 786 aa13.52□□□□□ -0.24
PRPF39-202ENST00000424478 A0A1W2PP55 124 aa13.52□□□□□ -0.25
PRPF39-202ENST00000424478 TCRBV21S2A2A0A5A6 115 aa13.52□□□□□ -0.25
PRPF39-202ENST00000424478 FAM47DPA6NHR8 397 aa13.52□□□□□ -0.25
PRPF39-202ENST00000424478 ANKRD66B4E2M5 251 aa13.52□□□□□ -0.25
PRPF39-202ENST00000424478 MAGEA6P43360 314 aa13.52□□□□□ -0.25
PRPF39-202ENST00000424478 ZXDAP98168 799 aa13.52□□□□□ -0.25
PRPF39-202ENST00000424478 PREPLQ4J6C6 727 aaPredicted RBP13.52□□□□□ -0.25
PRPF39-202ENST00000424478 NAPEPLDQ6IQ20 393 aa13.52□□□□□ -0.25
PRPF39-202ENST00000424478 ANO7Q6IWH7 933 aa13.52□□□□□ -0.25
PRPF39-202ENST00000424478 TMPRSS6Q8IU80 811 aa13.52□□□□□ -0.25
PRPF39-202ENST00000424478 PDIK1LQ8N165 341 aa13.52□□□□□ -0.25
PRPF39-202ENST00000424478 AADATQ8N5Z0 425 aa13.52□□□□□ -0.25
PRPF39-202ENST00000424478 NAT14Q8WUY8 206 aa13.52□□□□□ -0.25
PRPF39-202ENST00000424478 EID2BQ96D98 161 aa13.52□□□□□ -0.25
PRPF39-202ENST00000424478 SIGLEC10Q96LC7 697 aa13.52□□□□□ -0.25
PRPF39-202ENST00000424478 WRAP53Q9BUR4 548 aaKnown RBP13.52□□□□□ -0.25
PRPF39-202ENST00000424478 PLAC1Q9HBJ0 212 aa13.52□□□□□ -0.25
PRPF39-202ENST00000424478 PPM1HQ9ULR3 514 aa13.52□□□□□ -0.25
PRPF39-202ENST00000424478 C16orf96A6NNT2 1141 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 FZD6O60353 706 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 SUN1O94901 812 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 NDST3O95803 873 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 HNF1BP35680 557 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 ARL4CP56559 192 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 SDE2Q6IQ49 451 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 LRRC8BQ6P9F7 803 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 KIAA1324Q6UXG2 1013 aaKnown RBP13.51□□□□□ -0.25
PRPF39-202ENST00000424478 GANCQ8TET4 914 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 AENQ8WTP8 325 aaKnown RBP13.51□□□□□ -0.25
PRPF39-202ENST00000424478 TPSD1Q9BZJ3 242 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 CDC42EP4Q9H3Q1 356 aaKnown RBP13.51□□□□□ -0.25
PRPF39-202ENST00000424478 MFSD1Q9H3U5 465 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 SUDS3Q9H7L9 328 aaPredicted RBP13.51□□□□□ -0.25
PRPF39-202ENST00000424478 VPS45Q9NRW7 570 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 INVSQ9Y283 1065 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 MAN2B1O00754 1011 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 CPP00450 1065 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 NMBRP28336 390 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 STARD6P59095 220 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 CNTN1Q12860 1018 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 CDH17Q12864 832 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 ENPP2Q13822 863 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 LYSMD3Q7Z3D4 306 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 TMC3Q7Z5M5 1100 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 HOOK3Q86VS8 718 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 PGBD3Q8N328 593 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 OR13C4Q8NGS5 318 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 OR2W6PQ8NHA6 318 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 FEM1CQ96JP0 617 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 FCRL3Q96P31 734 aaPredicted RBP13.51□□□□□ -0.25
PRPF39-202ENST00000424478 MTRF1LQ9UGC7 380 aaKnown RBP13.51□□□□□ -0.25
PRPF39-202ENST00000424478 COQ6Q9Y2Z9 468 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 OR51F1A6NGY5 319 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 HTRA2O43464 458 aaPredicted RBP13.51□□□□□ -0.25
PRPF39-202ENST00000424478 CLDN7O95471 211 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 PRSS56P0CW18 603 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 LHCGRP22888 699 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 MAGEA4P43358 317 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 PRKCQQ04759 706 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 RAD51Q06609 339 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 TSSK4Q6SA08 328 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 C4orf22Q6V702 233 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.51□□□□□ -0.25
PRPF39-202ENST00000424478 BBOF1Q8ND07 529 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 RLN3Q8WXF3 142 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 EIF2B3Q9NR50 452 aaKnown RBP13.51□□□□□ -0.25
PRPF39-202ENST00000424478 CD84Q9UIB8 345 aa13.51□□□□□ -0.25
PRPF39-202ENST00000424478 GOLGA6CA6NDK9 693 aa13.5□□□□□ -0.25
PRPF39-202ENST00000424478 GOLGA6BA6NDN3 693 aa13.5□□□□□ -0.25
PRPF39-202ENST00000424478 RNASEH2AO75792 299 aaKnown RBP13.5□□□□□ -0.25
PRPF39-202ENST00000424478 GOLGA6DP0CG33 693 aa13.5□□□□□ -0.25
PRPF39-202ENST00000424478 TIMP2P16035 220 aa13.5□□□□□ -0.25
PRPF39-202ENST00000424478 NDUFV2P19404 249 aa13.5□□□□□ -0.25
PRPF39-202ENST00000424478 MSLNQ13421 630 aaPredicted RBP13.5□□□□□ -0.25
PRPF39-202ENST00000424478 CAMK2GQ13555 558 aaPredicted RBP13.5□□□□□ -0.25
PRPF39-202ENST00000424478 STARD3Q14849 445 aa13.5□□□□□ -0.25
PRPF39-202ENST00000424478 EFTUD2Q15029 972 aaKnown RBP eCLIP13.5□□□□□ -0.253e-10■■■■□ 25.3
PRPF39-202ENST00000424478 CST6Q15828 149 aa13.5□□□□□ -0.25
PRPF39-202ENST00000424478 CRY1Q16526 586 aa13.5□□□□□ -0.25
PRPF39-202ENST00000424478 TRMT10BQ6PF06 316 aaKnown RBP13.5□□□□□ -0.25
PRPF39-202ENST00000424478 FAM160A2Q8N612 972 aaPredicted RBP13.5□□□□□ -0.25
PRPF39-202ENST00000424478 PJA1Q8NG27 643 aa13.5□□□□□ -0.25
PRPF39-202ENST00000424478 UBLCP1Q8WVY7 318 aaPredicted RBP13.5□□□□□ -0.25
PRPF39-202ENST00000424478 GABRG3Q99928 467 aa13.5□□□□□ -0.25
PRPF39-202ENST00000424478 ABCG8Q9H221 673 aa13.5□□□□□ -0.25
PRPF39-202ENST00000424478 PCDH12Q9NPG4 1184 aa13.5□□□□□ -0.25
PRPF39-202ENST00000424478 GOLGA6AQ9NYA3 693 aa13.5□□□□□ -0.25
PRPF39-202ENST00000424478 DRD3P35462 400 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms