RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 C6orf106Q9H6K1 298 aaPredicted RBP9.35□□□□□ -0.91
PDGFC-202ENST00000422544 UBP1Q9NZI7 540 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 RSPH14Q9UHP6 348 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 CHKBQ9Y259 395 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 PCDHB9Q9Y5E1 797 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 FADS3Q9Y5Q0 445 aa9.35□□□□□ -0.91
PDGFC-202ENST00000422544 CFAP69A5D8W1 941 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 LRRC72A6NJI9 287 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 METTL12A8MUP2 240 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 SPINT1O43278 529 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 PMPCBO75439 489 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 GCATO75600 419 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 ZNF189O75820 626 aaPredicted RBP9.34□□□□□ -0.91
PDGFC-202ENST00000422544 RHOBTB1O94844 696 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 FSBPO95073 299 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 PCDH8O95206 1070 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 MT-CYBP00156 380 aaPredicted RBP9.34□□□□□ -0.91
PDGFC-202ENST00000422544 IFNB1P01574 187 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 ITGAVP06756 1048 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 PDHA1P08559 390 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 ZSCAN5DPP0CG00 497 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 ETS1P14921 441 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 STIP1P31948 543 aaKnown RBP9.34□□□□□ -0.91
PDGFC-202ENST00000422544 PTGER3P43115 390 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 DHPSP49366 369 aaPredicted RBP9.34□□□□□ -0.91
PDGFC-202ENST00000422544 POLR2LP62875 67 aaKnown RBP9.34□□□□□ -0.91
PDGFC-202ENST00000422544 ELF2Q15723 593 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 PCSK7Q16549 785 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 KCTD19Q17RG1 926 aaPredicted RBP9.34□□□□□ -0.91
PDGFC-202ENST00000422544 ARMC12Q5T9G4 340 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 PMS2CLQ68D20 193 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 KIAA0895LQ68EN5 471 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 ITPRIPL1Q6GPH6 555 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 DRICH1Q6PGQ1 229 aaPredicted RBP9.34□□□□□ -0.91
PDGFC-202ENST00000422544 BRAT1Q6PJG6 821 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 SLC41A1Q8IVJ1 513 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 KIAA2013Q8IYS2 634 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 TAB3Q8N5C8 712 aaPredicted RBP9.34□□□□□ -0.91
PDGFC-202ENST00000422544 CADM4Q8NFZ8 388 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 OR2T34Q8NGX1 318 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 PIH1D2Q8WWB5 315 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 MAGOHBQ96A72 148 aaKnown RBP9.34□□□□□ -0.91
PDGFC-202ENST00000422544 RAB7BQ96AH8 199 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 TADA1Q96BN2 335 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 OXNAD1Q96HP4 312 aaPredicted RBP9.34□□□□□ -0.91
PDGFC-202ENST00000422544 ZC3H10Q96K80 434 aaKnown RBP9.34□□□□□ -0.91
PDGFC-202ENST00000422544 SMIM14Q96QK8 99 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 FCRL5Q96RD9 977 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 EPC1Q9H2F5 836 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 PCDH12Q9NPG4 1184 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 HOMER3Q9NSC5 361 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 GGT7Q9UJ14 662 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 RALYQ9UKM9 306 aaKnown RBP9.34□□□□□ -0.91
PDGFC-202ENST00000422544 ITM2BQ9Y287 266 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 DRG1Q9Y295 367 aaKnown RBP9.34□□□□□ -0.91
PDGFC-202ENST00000422544 ABCA7Q8IZY2 2146 aa9.34□□□□□ -0.91
PDGFC-202ENST00000422544 GON4LQ3T8J9 2241 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 GCN1Q92616 2671 aaKnown RBP9.33□□□□□ -0.92
PDGFC-202ENST00000422544 BPTFQ12830 3046 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 A0A1W2PQ67 120 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 A0A1W2PQU0 124 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 A8MX80 341 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 UPK3BL1B0FP48 263 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 UPK3BL2E5RIL1 263 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 PDE2AO00408 941 aaPredicted RBP9.33□□□□□ -0.92
PDGFC-202ENST00000422544 NEMP1O14524 444 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 AREL1O15033 823 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 AP1G1O43747 822 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 FZD6O60353 706 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 OPHN1O60890 802 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 RNGTTO60942 597 aaKnown RBP9.33□□□□□ -0.92
PDGFC-202ENST00000422544 METTL18O95568 372 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 CPP00450 1065 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 PRLP01236 227 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 IGHV4-34P06331 123 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 CTPS1P17812 591 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 MAOBP27338 520 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 PSMB4P28070 264 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 MAT2AP31153 395 aaKnown RBP9.33□□□□□ -0.92
PDGFC-202ENST00000422544 COILP38432 576 aaPredicted RBP9.33□□□□□ -0.92
PDGFC-202ENST00000422544 WNT3AP56704 352 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 PPP2CBP62714 309 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 PPP2CAP67775 309 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 FAM193AP78312 1265 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 NUMA1Q14980 2115 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 PTPRRQ15256 657 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 PARP6Q2NL67 630 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 TTC27Q6P3X3 843 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 KDELC1Q6UW63 502 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 ARHGEF18Q6ZSZ5 1173 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 GSTA5Q7RTV2 222 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 ZSCAN30Q86W11 494 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 CCDC89Q8N998 374 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 GLIS1Q8NBF1 620 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 SUMF1Q8NBK3 374 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 LPCAT1Q8NF37 534 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 ATL2Q8NHH9 583 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 ZNF592Q92610 1267 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 KLK6Q92876 244 aa9.33□□□□□ -0.92
PDGFC-202ENST00000422544 BIRC7Q96CA5 298 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms