RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 HECTD2Q5U5R9 776 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 RTL3Q8N8U3 475 aaKnown RBP13.42□□□□□ -0.26
MCF2L-213ENST00000421756 ATP6V1E2Q96A05 226 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 KIFC1Q9BW19 673 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 OSBPL2Q9H1P3 480 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 NUP214P35658 2090 aaPredicted RBP13.42□□□□□ -0.26
MCF2L-213ENST00000421756 MAGEB16A2A368 324 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 FAM149AA5PLN7 773 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 TOMM70O94826 608 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 OR6B1O95007 311 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 LYNP07948 512 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 LINC00032P0C843 101 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 HADHAP40939 763 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 TWF1Q12792 350 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 PRKAA1Q13131 559 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 MED21Q13503 144 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 INSCQ1MX18 579 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 SIRPB2Q5JXA9 342 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 C6orf52Q5T4I8 152 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 FAM171BQ6P995 826 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 RSPO2Q6UXX9 243 aaPredicted RBP13.42□□□□□ -0.26
MCF2L-213ENST00000421756 SAPCD2Q86UD0 394 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 DBF4BQ8NFT6 615 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 FAM110BQ8TC76 370 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 LRCH3Q96II8 777 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 DNAJC28Q9NX36 388 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 MOXD2PA6NHM9 499 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 ZNF487B1APH4 448 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 NR5A2O00482 541 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 TLR5O60602 858 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 SEC24DO94855 1032 aaPredicted RBP13.42□□□□□ -0.26
MCF2L-213ENST00000421756 THRAP10827 490 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 GRIK3Q13003 919 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 PTK2BQ14289 1009 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 CUZD1Q86UP6 607 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 TM6SF2Q9BZW4 377 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 DRC3Q9H069 523 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 MKS1Q9NXB0 559 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 VWA7Q9Y334 891 aa13.42□□□□□ -0.26
MCF2L-213ENST00000421756 GON4LQ3T8J9 2241 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 SUPT3HB4E1H0 165 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 ENPP3O14638 875 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 SUPT3HO75486 399 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 CABYRO75952 493 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 PSMC3P17980 439 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 RPL10P27635 214 aaKnown RBP13.41□□□□□ -0.26
MCF2L-213ENST00000421756 ARCN1P48444 511 aaKnown RBP13.41□□□□□ -0.26
MCF2L-213ENST00000421756 CDK7P50613 346 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 MRPS35P82673 323 aaKnown RBP13.41□□□□□ -0.26
MCF2L-213ENST00000421756 UGP2Q16851 508 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 RNF19BQ6ZMZ0 732 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 TAS2R42Q7RTR8 314 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 PTGR2Q8N8N7 351 aaPredicted RBP13.41□□□□□ -0.26
MCF2L-213ENST00000421756 LPCAT1Q8NF37 534 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 FCRL5Q96RD9 977 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 VAT1Q99536 393 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 C1QTNF1Q9BXJ1 281 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 ZYG11BQ9C0D3 744 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 MID1IP1Q9NPA3 183 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 DONSONQ9NYP3 566 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.41□□□□□ -0.26
MCF2L-213ENST00000421756 SNX13Q9Y5W8 968 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 SLC4A7Q9Y6M7 1214 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 A0A0G2JMZ2 1700 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 LRRC37A2A6NM11 1700 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 RGSL1A5PLK6 1076 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 A8MT66 165 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 ADAM12O43184 909 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 GOT2P00505 430 aaKnown RBP13.41□□□□□ -0.26
MCF2L-213ENST00000421756 UGT1A6P19224 532 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 RENBPP51606 427 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 FOXA1P55317 472 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 PCBP1Q15365 356 aaKnown RBP eCLIP13.41□□□□□ -0.26
MCF2L-213ENST00000421756 MAP7D1Q3KQU3 841 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 KLC3Q6P597 504 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 TMEM207Q6UWW9 146 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 LIMS2Q7Z4I7 341 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 PGBD5Q8N414 524 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 NMD3Q96D46 503 aaKnown RBP13.41□□□□□ -0.26
MCF2L-213ENST00000421756 GLT1D1Q96MS3 346 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 SERPINB11Q96P15 392 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 CDK15Q96Q40 435 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 C1orf50Q9BV19 199 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 MMADHCQ9H3L0 296 aaPredicted RBP13.41□□□□□ -0.26
MCF2L-213ENST00000421756 DTNAQ9Y4J8 743 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 A0A1B0GTL3 188 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 UBDO15205 165 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 GJB5O95377 273 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 PPARGP37231 505 aaPredicted RBP13.41□□□□□ -0.26
MCF2L-213ENST00000421756 PIK3CGP48736 1102 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 TET1Q8NFU7 2136 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 AUTS2Q8WXX7 1259 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 KLHL4Q9C0H6 718 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 ENTPD7Q9NQZ7 604 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 LRFN2Q9ULH4 789 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 SLC45A1Q9Y2W3 748 aa13.41□□□□□ -0.26
MCF2L-213ENST00000421756 CCDC189A1A4V9 331 aa13.4□□□□□ -0.26
MCF2L-213ENST00000421756 MANSC4A6NHS7 340 aaPredicted RBP13.4□□□□□ -0.26
MCF2L-213ENST00000421756 SEPT4O43236 478 aa13.4□□□□□ -0.26
MCF2L-213ENST00000421756 CTPS1P17812 591 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms