RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 IL10RBQ08334 325 aa20.54■□□□□ 0.88
MCF2L-212ENST00000420013 MTM1Q13496 603 aa20.54■□□□□ 0.88
MCF2L-212ENST00000420013 NFATC4Q14934 902 aa20.54■□□□□ 0.88
MCF2L-212ENST00000420013 ELOCQ15369 112 aa20.54■□□□□ 0.88
MCF2L-212ENST00000420013 CDKN3Q16667 212 aa20.54■□□□□ 0.88
MCF2L-212ENST00000420013 CA9Q16790 459 aa20.54■□□□□ 0.88
MCF2L-212ENST00000420013 FAXCQ5TGI0 409 aa20.54■□□□□ 0.88
MCF2L-212ENST00000420013 ZNF571Q7Z3V5 609 aaPredicted RBP20.54■□□□□ 0.88
MCF2L-212ENST00000420013 ARHGAP12Q8IWW6 846 aa20.54■□□□□ 0.88
MCF2L-212ENST00000420013 SLC35F3Q8IY50 421 aa20.54■□□□□ 0.88
MCF2L-212ENST00000420013 ZNF248Q8NDW4 579 aa20.54■□□□□ 0.88
MCF2L-212ENST00000420013 ZNF653Q96CK0 615 aa20.54■□□□□ 0.88
MCF2L-212ENST00000420013 ECHDC3Q96DC8 303 aa20.54■□□□□ 0.88
MCF2L-212ENST00000420013 SLC39A8Q9C0K1 460 aa20.54■□□□□ 0.88
MCF2L-212ENST00000420013 POLR1BQ9H9Y6 1135 aa20.54■□□□□ 0.88
MCF2L-212ENST00000420013 CNOT8Q9UFF9 292 aaKnown RBP20.54■□□□□ 0.88
MCF2L-212ENST00000420013 USP12O75317 370 aa20.53■□□□□ 0.88
MCF2L-212ENST00000420013 LRCH4O75427 683 aa20.53■□□□□ 0.88
MCF2L-212ENST00000420013 PALMO75781 387 aa20.53■□□□□ 0.88
MCF2L-212ENST00000420013 RASGRP1O95267 797 aa20.53■□□□□ 0.88
MCF2L-212ENST00000420013 ITPKBP27987 946 aa20.53■□□□□ 0.88
MCF2L-212ENST00000420013 MIPP30301 263 aa20.53■□□□□ 0.88
MCF2L-212ENST00000420013 PCK1P35558 622 aa20.53■□□□□ 0.88
MCF2L-212ENST00000420013 HK3P52790 923 aa20.53■□□□□ 0.88
MCF2L-212ENST00000420013 AP1S1P61966 158 aa20.53■□□□□ 0.88
MCF2L-212ENST00000420013 KLHL30Q0D2K2 578 aa20.53■□□□□ 0.88
MCF2L-212ENST00000420013 ISXQ2M1V0 245 aa20.53■□□□□ 0.88
MCF2L-212ENST00000420013 WSCD2Q2TBF2 565 aa20.53■□□□□ 0.88
MCF2L-212ENST00000420013 FIGNQ5HY92 759 aa20.53■□□□□ 0.88
MCF2L-212ENST00000420013 TMCO4Q5TGY1 634 aa20.53■□□□□ 0.88
MCF2L-212ENST00000420013 E4F1Q66K89 784 aaPredicted RBP20.53■□□□□ 0.88
MCF2L-212ENST00000420013 ESRP1Q6NXG1 681 aaKnown RBP20.53■□□□□ 0.88
MCF2L-212ENST00000420013 LVRNQ6Q4G3 990 aa20.53■□□□□ 0.88
MCF2L-212ENST00000420013 RBM44Q6ZP01 1051 aaKnown RBP20.53■□□□□ 0.88
MCF2L-212ENST00000420013 CYP4V2Q6ZWL3 525 aaPredicted RBP20.53■□□□□ 0.88
MCF2L-212ENST00000420013 SRLQ86TD4 932 aa20.53■□□□□ 0.88
MCF2L-212ENST00000420013 ARFGAP1Q8N6T3 406 aa20.53■□□□□ 0.88
MCF2L-212ENST00000420013 NETO2Q8NC67 525 aa20.53■□□□□ 0.88
MCF2L-212ENST00000420013 TSEN2Q8NCE0 465 aaKnown RBP20.53■□□□□ 0.88
MCF2L-212ENST00000420013 SCG3Q8WXD2 468 aaKnown RBP20.53■□□□□ 0.88
MCF2L-212ENST00000420013 ZNF599Q96NL3 588 aa20.53■□□□□ 0.88
MCF2L-212ENST00000420013 LGMNQ99538 433 aa20.53■□□□□ 0.88
MCF2L-212ENST00000420013 TCEAL2Q9H3H9 227 aaPredicted RBP20.53■□□□□ 0.88
MCF2L-212ENST00000420013 PRORYQ9H606 182 aa20.53■□□□□ 0.88
MCF2L-212ENST00000420013 ZWILCHQ9H900 591 aa20.53■□□□□ 0.88
MCF2L-212ENST00000420013 PCSK1NQ9UHG2 260 aa20.53■□□□□ 0.88
MCF2L-212ENST00000420013 COQ6Q9Y2Z9 468 aa20.53■□□□□ 0.88
MCF2L-212ENST00000420013 CPED1A4D0V7 1026 aa20.52■□□□□ 0.88
MCF2L-212ENST00000420013 GCATO75600 419 aa20.52■□□□□ 0.88
MCF2L-212ENST00000420013 FTLP02792 175 aaPredicted RBP20.52■□□□□ 0.88
MCF2L-212ENST00000420013 MYF5P13349 255 aa20.52■□□□□ 0.88
MCF2L-212ENST00000420013 TSHRP16473 764 aa20.52■□□□□ 0.88
MCF2L-212ENST00000420013 ITIH2P19823 946 aa20.52■□□□□ 0.88
MCF2L-212ENST00000420013 HSPA9P38646 679 aaKnown RBP20.52■□□□□ 0.88
MCF2L-212ENST00000420013 MLLT3P42568 568 aaPredicted RBP20.52■□□□□ 0.88
MCF2L-212ENST00000420013 ZNF165P49910 485 aa20.52■□□□□ 0.88
MCF2L-212ENST00000420013 LIG3P49916 1009 aa20.52■□□□□ 0.88
MCF2L-212ENST00000420013 RENBPP51606 427 aa20.52■□□□□ 0.88
MCF2L-212ENST00000420013 BCL2L1Q07817 233 aa20.52■□□□□ 0.88
MCF2L-212ENST00000420013 NSUN2Q08J23 767 aaKnown RBP eCLIP20.52■□□□□ 0.88
MCF2L-212ENST00000420013 PPP6R3Q5H9R7 873 aaPredicted RBP20.52■□□□□ 0.88
MCF2L-212ENST00000420013 NPWQ8N729 165 aa20.52■□□□□ 0.88
MCF2L-212ENST00000420013 ARL10Q8N8L6 244 aa20.52■□□□□ 0.88
MCF2L-212ENST00000420013 SPOCK2Q92563 424 aa20.52■□□□□ 0.88
MCF2L-212ENST00000420013 CRELD1Q96HD1 420 aa20.52■□□□□ 0.88
MCF2L-212ENST00000420013 THSD1Q9NS62 852 aa20.52■□□□□ 0.88
MCF2L-212ENST00000420013 SEPT3Q9UH03 358 aa20.52■□□□□ 0.88
MCF2L-212ENST00000420013 PNMA8BQ9ULN7 279 aaPredicted RBP20.52■□□□□ 0.88
MCF2L-212ENST00000420013 DOLKQ9UPQ8 538 aa20.52■□□□□ 0.88
MCF2L-212ENST00000420013 A0A1W2PQ67 120 aa20.51■□□□□ 0.87
MCF2L-212ENST00000420013 EIF4E1BA6NMX2 242 aaKnown RBP20.51■□□□□ 0.87
MCF2L-212ENST00000420013 H3BRJ5 948 aa20.51■□□□□ 0.87
MCF2L-212ENST00000420013 DDX3XO00571 662 aaKnown RBP eCLIP20.51■□□□□ 0.87
MCF2L-212ENST00000420013 MPOP05164 745 aa20.51■□□□□ 0.87
MCF2L-212ENST00000420013 TGM2P21980 687 aa20.51■□□□□ 0.87
MCF2L-212ENST00000420013 ARL4AP40617 200 aa20.51■□□□□ 0.87
MCF2L-212ENST00000420013 RGRP47804 291 aa20.51■□□□□ 0.87
MCF2L-212ENST00000420013 UCNP55089 124 aa20.51■□□□□ 0.87
MCF2L-212ENST00000420013 ADKP55263 362 aaKnown RBP20.51■□□□□ 0.87
MCF2L-212ENST00000420013 KIAA1024LP59773 190 aa20.51■□□□□ 0.87
MCF2L-212ENST00000420013 POLR2LP62875 67 aaKnown RBP20.51■□□□□ 0.87
MCF2L-212ENST00000420013 TPM4P67936 248 aa20.51■□□□□ 0.87
MCF2L-212ENST00000420013 TLE3Q04726 772 aa20.51■□□□□ 0.87
MCF2L-212ENST00000420013 DPYSQ14117 519 aa20.51■□□□□ 0.87
MCF2L-212ENST00000420013 DPYSL2Q16555 572 aa20.51■□□□□ 0.87
MCF2L-212ENST00000420013 ALG11Q2TAA5 492 aa20.51■□□□□ 0.87
MCF2L-212ENST00000420013 ZSWIM9Q86XI8 627 aa20.51■□□□□ 0.87
MCF2L-212ENST00000420013 CAMK1DQ8IU85 385 aa20.51■□□□□ 0.87
MCF2L-212ENST00000420013 HIC2Q96JB3 615 aa20.51■□□□□ 0.87
MCF2L-212ENST00000420013 WDR92Q96MX6 357 aa20.51■□□□□ 0.87
MCF2L-212ENST00000420013 FCRL3Q96P31 734 aaPredicted RBP20.51■□□□□ 0.87
MCF2L-212ENST00000420013 PSKH2Q96QS6 385 aa20.51■□□□□ 0.87
MCF2L-212ENST00000420013 APOOQ9BUR5 198 aa20.51■□□□□ 0.87
MCF2L-212ENST00000420013 TRIM7Q9C029 511 aa20.51■□□□□ 0.87
MCF2L-212ENST00000420013 CLPBQ9H078 707 aa20.51■□□□□ 0.87
MCF2L-212ENST00000420013 ISCUQ9H1K1 167 aa20.51■□□□□ 0.87
MCF2L-212ENST00000420013 KLQ9UEF7 1012 aa20.51■□□□□ 0.87
MCF2L-212ENST00000420013 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.5■□□□□ 0.87
MCF2L-212ENST00000420013 DFFAO00273 331 aa20.5■□□□□ 0.87
MCF2L-212ENST00000420013 MUSKO15146 869 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms