RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 ADHFE1Q8IWW8 467 aa4.57□□□□□ -1.68
HMGB1P49-201ENST00000418882 PPM1EQ8WY54 764 aa4.57□□□□□ -1.68
HMGB1P49-201ENST00000418882 BBS4Q96RK4 519 aa4.57□□□□□ -1.68
HMGB1P49-201ENST00000418882 PAIP1Q9H074 479 aaKnown RBP4.57□□□□□ -1.68
HMGB1P49-201ENST00000418882 MYH16Q9H6N6 1097 aa4.57□□□□□ -1.68
HMGB1P49-201ENST00000418882 GAREM1Q9H706 876 aa4.57□□□□□ -1.68
HMGB1P49-201ENST00000418882 NOX4Q9NPH5 578 aa4.57□□□□□ -1.68
HMGB1P49-201ENST00000418882 SELENONQ9NZV5 590 aa4.57□□□□□ -1.68
HMGB1P49-201ENST00000418882 NAALADL1Q9UQQ1 740 aa4.57□□□□□ -1.68
HMGB1P49-201ENST00000418882 CARD8Q9Y2G2 431 aa4.57□□□□□ -1.68
HMGB1P49-201ENST00000418882 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.57□□□□□ -1.68
HMGB1P49-201ENST00000418882 A0A1B0GVC2 190 aa4.56□□□□□ -1.68
HMGB1P49-201ENST00000418882 A6NLC8 198 aa4.56□□□□□ -1.68
HMGB1P49-201ENST00000418882 SNAP23O00161 211 aa4.56□□□□□ -1.68
HMGB1P49-201ENST00000418882 BCAT2O15382 392 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P49-201ENST00000418882 SERPINI2O75830 405 aa4.56□□□□□ -1.68
HMGB1P49-201ENST00000418882 ETFAP13804 333 aa4.56□□□□□ -1.68
HMGB1P49-201ENST00000418882 HOXB6P17509 224 aaKnown RBP4.56□□□□□ -1.68
HMGB1P49-201ENST00000418882 AGAP20933 346 aa4.56□□□□□ -1.68
HMGB1P49-201ENST00000418882 POU1F1P28069 291 aa4.56□□□□□ -1.68
HMGB1P49-201ENST00000418882 SHMT1P34896 483 aa4.56□□□□□ -1.68
HMGB1P49-201ENST00000418882 HDAC4P56524 1084 aa4.56□□□□□ -1.68
HMGB1P49-201ENST00000418882 KRTAP10-9P60411 292 aa4.56□□□□□ -1.68
HMGB1P49-201ENST00000418882 PTP4A2Q12974 167 aa4.56□□□□□ -1.68
HMGB1P49-201ENST00000418882 VEPH1Q14D04 833 aa4.56□□□□□ -1.68
HMGB1P49-201ENST00000418882 ASIC2Q16515 512 aa4.56□□□□□ -1.68
HMGB1P49-201ENST00000418882 DCAF6Q58WW2 860 aa4.56□□□□□ -1.68
HMGB1P49-201ENST00000418882 PDXDC1Q6P996 788 aa4.56□□□□□ -1.68
HMGB1P49-201ENST00000418882 SHFQ7M4L6 423 aa4.56□□□□□ -1.68
HMGB1P49-201ENST00000418882 ZNF114Q8NC26 417 aa4.56□□□□□ -1.68
HMGB1P49-201ENST00000418882 C11orf65Q8NCR3 313 aa4.56□□□□□ -1.68
HMGB1P49-201ENST00000418882 ZCCHC10Q8TBK6 192 aa4.56□□□□□ -1.68
HMGB1P49-201ENST00000418882 MEIS3Q99687 375 aa4.56□□□□□ -1.68
HMGB1P49-201ENST00000418882 SPRY4Q9C004 299 aa4.56□□□□□ -1.68
HMGB1P49-201ENST00000418882 KCNN2Q9H2S1 579 aa4.56□□□□□ -1.68
HMGB1P49-201ENST00000418882 PLEKHA4Q9H4M7 779 aa4.56□□□□□ -1.68
HMGB1P49-201ENST00000418882 ESRP2Q9H6T0 727 aaKnown RBP4.56□□□□□ -1.68
HMGB1P49-201ENST00000418882 SLC9A2Q9UBY0 812 aa4.56□□□□□ -1.68
HMGB1P49-201ENST00000418882 SARDHQ9UL12 918 aa4.56□□□□□ -1.68
HMGB1P49-201ENST00000418882 PROCRQ9UNN8 238 aa4.56□□□□□ -1.68
HMGB1P49-201ENST00000418882 LSM4Q9Y4Z0 139 aaKnown RBP4.56□□□□□ -1.68
HMGB1P49-201ENST00000418882 ARID4BQ4LE39 1312 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 A0A0U1RQJ8 604 aa4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 CPED1A4D0V7 1026 aa4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 TAF4O00268 1085 aa4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 SEC31AO94979 1220 aaKnown RBP4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 FGF3P11487 239 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 PCNAP12004 261 aa4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 ATP1A3P13637 1013 aa4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 COX7A2P14406 83 aa4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 SEC61A1P61619 476 aaKnown RBP4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 MYBPHQ13203 477 aa4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 C2orf68Q2NKX9 166 aa4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 ALG11Q2TAA5 492 aa4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 DLK2Q6UY11 383 aa4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 B3GNT6Q6ZMB0 384 aa4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 CREB3L2Q70SY1 520 aa4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 MTSS1LQ765P7 747 aa4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 FOXRED2Q8IWF2 684 aa4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 IL17REQ8NFR9 667 aa4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 ZUFSPQ96AP4 578 aa4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 KIF1BPQ96EK5 621 aa4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 SCMH1Q96GD3 660 aa4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 SIN3AQ96ST3 1273 aa4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 CSF3RQ99062 836 aa4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 TM6SF1Q9BZW5 370 aa4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 UBN1Q9NPG3 1134 aa4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 SMYD2Q9NRG4 433 aa4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 PCDHB16Q9NRJ7 776 aa4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 SLC13A4Q9UKG4 626 aa4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 ARHGAP26Q9UNA1 814 aa4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 GTF2A1LQ9UNN4 478 aa4.55□□□□□ -1.68
HMGB1P49-201ENST00000418882 hDV102S1A0JD36 115 aa4.54□□□□□ -1.68
HMGB1P49-201ENST00000418882 WNT9BO14905 357 aa4.54□□□□□ -1.68
HMGB1P49-201ENST00000418882 ZIC3O60481 467 aa4.54□□□□□ -1.68
HMGB1P49-201ENST00000418882 NDUFS7O75251 213 aa4.54□□□□□ -1.68
HMGB1P49-201ENST00000418882 TFP02787 698 aa4.54□□□□□ -1.68
HMGB1P49-201ENST00000418882 CYC1P08574 325 aa4.54□□□□□ -1.68
HMGB1P49-201ENST00000418882 EPHA8P29322 1005 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P49-201ENST00000418882 HNRNPH1P31943 449 aaKnown RBP4.54□□□□□ -1.68
HMGB1P49-201ENST00000418882 EIF2S3P41091 472 aaKnown RBP4.54□□□□□ -1.68
HMGB1P49-201ENST00000418882 TUBA1BP68363 451 aa4.54□□□□□ -1.68
HMGB1P49-201ENST00000418882 XKR9Q5GH70 373 aa4.54□□□□□ -1.68
HMGB1P49-201ENST00000418882 RHBDF2Q6PJF5 856 aa4.54□□□□□ -1.68
HMGB1P49-201ENST00000418882 LCTLQ6UWM7 567 aa4.54□□□□□ -1.68
HMGB1P49-201ENST00000418882 QSOX2Q6ZRP7 698 aa4.54□□□□□ -1.68
HMGB1P49-201ENST00000418882 SMRP1Q8NCR6 262 aa4.54□□□□□ -1.68
HMGB1P49-201ENST00000418882 LILRB1Q8NHL6 650 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P49-201ENST00000418882 RND1Q92730 232 aa4.54□□□□□ -1.68
HMGB1P49-201ENST00000418882 KLHL29Q96CT2 875 aa4.54□□□□□ -1.68
HMGB1P49-201ENST00000418882 FAM84BQ96KN1 310 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P49-201ENST00000418882 LRFN5Q96NI6 719 aa4.54□□□□□ -1.68
HMGB1P49-201ENST00000418882 NR1H4Q96RI1 486 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P49-201ENST00000418882 HAUS8Q9BT25 410 aa4.54□□□□□ -1.68
HMGB1P49-201ENST00000418882 MAGEE1Q9HCI5 957 aa4.54□□□□□ -1.68
HMGB1P49-201ENST00000418882 MKKSQ9NPJ1 570 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P49-201ENST00000418882 KCND2Q9NZV8 630 aa4.54□□□□□ -1.68
HMGB1P49-201ENST00000418882 PGAP2Q9UHJ9 254 aa4.54□□□□□ -1.68
HMGB1P49-201ENST00000418882 TINAGQ9UJW2 476 aa4.54□□□□□ -1.68
HMGB1P49-201ENST00000418882 CDC14AQ9UNH5 594 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms