RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 BABAM1Q9NWV8 329 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 IFT80Q9P2H3 777 aaPredicted RBP2.82□□□□□ -1.96
VPS41-206ENST00000418457 HDAC6Q9UBN7 1215 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 POLKQ9UBT6 870 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 PGAP2Q9UHJ9 254 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 CNOT7Q9UIV1 285 aaKnown RBP2.82□□□□□ -1.96
VPS41-206ENST00000418457 CDH22Q9UJ99 828 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 TBX20Q9UMR3 447 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 SMC3Q9UQE7 1217 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 CNPY2Q9Y2B0 182 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 CRYL1Q9Y2S2 319 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 RAP2CQ9Y3L5 183 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 NPHP3Q7Z494 1330 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 TTC21BQ7Z4L5 1316 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 RAD50Q92878 1312 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 CPS1P31327 1500 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 CEP170BQ9Y4F5 1589 aaPredicted RBP2.82□□□□□ -1.96
VPS41-206ENST00000418457 TOPAZ1Q8N9V7 1692 aa2.82□□□□□ -1.96
VPS41-206ENST00000418457 MYH15Q9Y2K3 1946 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 IGLV5-39A0A0G2JS06 123 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 C17orf102A2RUQ5 167 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 GOLGA6L4A6NEF3 574 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 GAGE12JA6NER3 117 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 PER2O15055 1255 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 MDM4O15151 490 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 CTAGE5O15320 804 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 ATP8B1O43520 1251 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 CEP104O60308 925 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 ADAP00813 363 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 SERPINC1P01008 464 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 KLKB1P03952 638 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 TPM1P09493 284 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 TBXAS1P24557 533 aaPredicted RBP2.81□□□□□ -1.96
VPS41-206ENST00000418457 PSMA5P28066 241 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 TNFSF8P32971 234 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 RFC1P35251 1148 aaPredicted RBP2.81□□□□□ -1.96
VPS41-206ENST00000418457 GSDMDP57764 484 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 RPP30P78346 268 aaKnown RBP2.81□□□□□ -1.96
VPS41-206ENST00000418457 CBX1P83916 185 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 NCBP1Q09161 790 aaKnown RBP2.81□□□□□ -1.96
VPS41-206ENST00000418457 TDGQ13569 410 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 PTGR1Q14914 329 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 TWIST1Q15672 202 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 GPR68Q15743 365 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 RPE65Q16518 533 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 PRTGQ2VWP7 1150 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 FBXO43Q4G163 708 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 ASPHD1Q5U4P2 390 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 NUGGCQ68CJ6 796 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 ATL3Q6DD88 541 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 SARM1Q6SZW1 724 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 SLC22A25Q6T423 547 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 IL20RBQ6UXL0 311 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 COLCA1Q6ZS62 124 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 RBM43Q6ZSC3 357 aaKnown RBP2.81□□□□□ -1.96
VPS41-206ENST00000418457 ZNF771Q7L3S4 317 aaPredicted RBP2.81□□□□□ -1.96
VPS41-206ENST00000418457 SERPINA11Q86U17 422 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 GPSM1Q86YR5 675 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 TMC8Q8IU68 726 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 FAM217AQ8IXS0 508 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 CNTROBQ8N137 903 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 TMEM199Q8N511 208 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 ZNF366Q8N895 744 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 KDM1BQ8NB78 822 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 ZNF397Q8NF99 534 aaPredicted RBP2.81□□□□□ -1.96
VPS41-206ENST00000418457 IL17REQ8NFR9 667 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 TNIP2Q8NFZ5 429 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 TDRD7Q8NHU6 1098 aaKnown RBP2.81□□□□□ -1.96
VPS41-206ENST00000418457 RAB40AQ8WXH6 277 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 LPAR1Q92633 364 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 ERO1AQ96HE7 468 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 COG3Q96JB2 828 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 ZNF333Q96JL9 665 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 TIGD1Q96MW7 591 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 TTC14Q96N46 770 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 PRAM1Q96QH2 718 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 EYA3Q99504 573 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 CLSTN3Q9BQT9 956 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 CDK19Q9BWU1 502 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 B3GNT4Q9C0J1 378 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 INTS2Q9H0H0 1204 aaKnown RBP2.81□□□□□ -1.96
VPS41-206ENST00000418457 ALDH8A1Q9H2A2 487 aaPredicted RBP2.81□□□□□ -1.96
VPS41-206ENST00000418457 CXorf56Q9H5V9 222 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 EPHX3Q9H6B9 360 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 MAP6D1Q9H9H5 199 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 ATP8A2Q9NTI2 1148 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 ARGLU1Q9NWB6 273 aaPredicted RBP2.81□□□□□ -1.96
VPS41-206ENST00000418457 TBC1D14Q9P2M4 693 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 NLKQ9UBE8 527 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 PLEKHB1Q9UF11 243 aaPredicted RBP2.81□□□□□ -1.96
VPS41-206ENST00000418457 CTNNA3Q9UI47 895 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 ZHX1Q9UKY1 873 aaPredicted RBP2.81□□□□□ -1.96
VPS41-206ENST00000418457 CLDN16Q9Y5I7 305 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 TTC41PQ6P2S7 1318 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 USP42Q9H9J4 1324 aaKnown RBP2.81□□□□□ -1.96
VPS41-206ENST00000418457 MAP3K5Q99683 1374 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 TECPR2O15040 1411 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 A2ML1A8K2U0 1454 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 DIP2AQ14689 1571 aa2.81□□□□□ -1.96
VPS41-206ENST00000418457 STRCQ7RTU9 1775 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms