RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 SETMARQ53H47 684 aaPredicted RBP13.45□□□□□ -0.26
TMEM248-203ENST00000418375 SLC45A4Q5BKX6 768 aa13.45□□□□□ -0.26
TMEM248-203ENST00000418375 KIAA1161Q6NSJ0 714 aa13.45□□□□□ -0.26
TMEM248-203ENST00000418375 PIP4P1Q86T03 277 aa13.45□□□□□ -0.26
TMEM248-203ENST00000418375 CDKL3Q8IVW4 592 aaPredicted RBP13.45□□□□□ -0.26
TMEM248-203ENST00000418375 REXO1L1PQ8IX06 675 aa13.45□□□□□ -0.26
TMEM248-203ENST00000418375 ZCCHC9Q8N567 271 aaKnown RBP13.45□□□□□ -0.26
TMEM248-203ENST00000418375 ACTL9Q8TC94 416 aa13.45□□□□□ -0.26
TMEM248-203ENST00000418375 ECHDC3Q96DC8 303 aa13.45□□□□□ -0.26
TMEM248-203ENST00000418375 QKIQ96PU8 341 aaKnown RBP eCLIP13.45□□□□□ -0.26
TMEM248-203ENST00000418375 HERPUD2Q9BSE4 406 aa13.45□□□□□ -0.26
TMEM248-203ENST00000418375 CARD9Q9H257 536 aa13.45□□□□□ -0.26
TMEM248-203ENST00000418375 TRMT1Q9NXH9 659 aaKnown RBP13.45□□□□□ -0.26
TMEM248-203ENST00000418375 DMTF1Q9Y222 760 aa13.45□□□□□ -0.26
TMEM248-203ENST00000418375 ATP8A1Q9Y2Q0 1164 aa13.45□□□□□ -0.26
TMEM248-203ENST00000418375 PCDHGC4Q9Y5F7 938 aa13.45□□□□□ -0.26
TMEM248-203ENST00000418375 GON4LQ3T8J9 2241 aa13.45□□□□□ -0.26
TMEM248-203ENST00000418375 TNRC6BQ9UPQ9 1833 aaKnown RBP13.44□□□□□ -0.26
TMEM248-203ENST00000418375 C10orf142B7Z368 130 aa13.44□□□□□ -0.26
TMEM248-203ENST00000418375 TRAFD1O14545 582 aaPredicted RBP13.44□□□□□ -0.26
TMEM248-203ENST00000418375 KCNK3O14649 394 aa13.44□□□□□ -0.26
TMEM248-203ENST00000418375 AREL1O15033 823 aa13.44□□□□□ -0.26
TMEM248-203ENST00000418375 HTRA2O43464 458 aaPredicted RBP13.44□□□□□ -0.26
TMEM248-203ENST00000418375 KIF5CO60282 957 aa13.44□□□□□ -0.26
TMEM248-203ENST00000418375 KRT37O76014 449 aa13.44□□□□□ -0.26
TMEM248-203ENST00000418375 MAT2AP31153 395 aaKnown RBP13.44□□□□□ -0.26
TMEM248-203ENST00000418375 EIF3EP60228 445 aaKnown RBP13.44□□□□□ -0.26
TMEM248-203ENST00000418375 DSC2Q02487 901 aa13.44□□□□□ -0.26
TMEM248-203ENST00000418375 NUMA1Q14980 2115 aa13.44□□□□□ -0.26
TMEM248-203ENST00000418375 TEAD4Q15561 434 aa13.44□□□□□ -0.26
TMEM248-203ENST00000418375 TEX44Q53QW1 395 aa13.44□□□□□ -0.26
TMEM248-203ENST00000418375 ARMC12Q5T9G4 340 aa13.44□□□□□ -0.26
TMEM248-203ENST00000418375 B4GALNT4Q76KP1 1039 aa13.44□□□□□ -0.26
TMEM248-203ENST00000418375 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.44□□□□□ -0.26
TMEM248-203ENST00000418375 CNTD1Q8N815 330 aa13.44□□□□□ -0.26
TMEM248-203ENST00000418375 OR2I1PQ8NGU4 316 aa13.44□□□□□ -0.26
TMEM248-203ENST00000418375 CXorf40AQ8TE69 158 aa13.44□□□□□ -0.26
TMEM248-203ENST00000418375 PDCD6IPQ8WUM4 868 aaKnown RBP13.44□□□□□ -0.26
TMEM248-203ENST00000418375 HTR3CQ8WXA8 447 aa13.44□□□□□ -0.26
TMEM248-203ENST00000418375 SERAC1Q96JX3 654 aa13.44□□□□□ -0.26
TMEM248-203ENST00000418375 AGAP3Q96P47 875 aa13.44□□□□□ -0.26
TMEM248-203ENST00000418375 VAT1Q99536 393 aa13.44□□□□□ -0.26
TMEM248-203ENST00000418375 PCDH12Q9NPG4 1184 aa13.44□□□□□ -0.26
TMEM248-203ENST00000418375 DNAAF2Q9NVR5 837 aaKnown RBP13.44□□□□□ -0.26
TMEM248-203ENST00000418375 STK10O94804 968 aaKnown RBP13.43□□□□□ -0.26
TMEM248-203ENST00000418375 PGLSO95336 258 aa13.43□□□□□ -0.26
TMEM248-203ENST00000418375 CPP00450 1065 aa13.43□□□□□ -0.26
TMEM248-203ENST00000418375 RBP3P10745 1247 aa13.43□□□□□ -0.26
TMEM248-203ENST00000418375 PTPN3P26045 913 aa13.43□□□□□ -0.26
TMEM248-203ENST00000418375 AFF3P51826 1226 aaKnown RBP13.43□□□□□ -0.26
TMEM248-203ENST00000418375 RACK1P63244 317 aaKnown RBP13.43□□□□□ -0.26
TMEM248-203ENST00000418375 SIM1P81133 766 aaPredicted RBP13.43□□□□□ -0.26
TMEM248-203ENST00000418375 CACNA1BQ00975 2339 aa13.43□□□□□ -0.26
TMEM248-203ENST00000418375 TRAF2Q12933 501 aa13.43□□□□□ -0.26
TMEM248-203ENST00000418375 SGCGQ13326 291 aa13.43□□□□□ -0.26
TMEM248-203ENST00000418375 KLF1Q13351 362 aaPredicted RBP13.43□□□□□ -0.26
TMEM248-203ENST00000418375 ZNF284Q2VY69 593 aa13.43□□□□□ -0.26
TMEM248-203ENST00000418375 LRRC73Q5JTD7 316 aa13.43□□□□□ -0.26
TMEM248-203ENST00000418375 ZNF569Q5MCW4 686 aa13.43□□□□□ -0.26
TMEM248-203ENST00000418375 NAPEPLDQ6IQ20 393 aa13.43□□□□□ -0.26
TMEM248-203ENST00000418375 DARS2Q6PI48 645 aaKnown RBP13.43□□□□□ -0.26
TMEM248-203ENST00000418375 ADAT2Q7Z6V5 191 aaKnown RBP13.43□□□□□ -0.26
TMEM248-203ENST00000418375 ZSWIM9Q86XI8 627 aa13.43□□□□□ -0.26
TMEM248-203ENST00000418375 NDUFAF2Q8N183 169 aa13.43□□□□□ -0.26
TMEM248-203ENST00000418375 ARRDC2Q8TBH0 407 aa13.43□□□□□ -0.26
TMEM248-203ENST00000418375 SPOCK2Q92563 424 aa13.43□□□□□ -0.26
TMEM248-203ENST00000418375 SKA1Q96BD8 255 aa13.43□□□□□ -0.26
TMEM248-203ENST00000418375 NSMCE3Q96MG7 304 aa13.43□□□□□ -0.26
TMEM248-203ENST00000418375 ORAI3Q9BRQ5 295 aa13.43□□□□□ -0.26
TMEM248-203ENST00000418375 TLR10Q9BXR5 811 aa13.43□□□□□ -0.26
TMEM248-203ENST00000418375 CEP41Q9BYV8 373 aa13.43□□□□□ -0.26
TMEM248-203ENST00000418375 ZDHHC5Q9C0B5 715 aa13.43□□□□□ -0.26
TMEM248-203ENST00000418375 SLC25A51Q9H1U9 297 aa13.43□□□□□ -0.26
TMEM248-203ENST00000418375 TM9SF3Q9HD45 589 aa13.43□□□□□ -0.26
TMEM248-203ENST00000418375 AASDHPPTQ9NRN7 309 aa13.43□□□□□ -0.26
TMEM248-203ENST00000418375 KLHL8Q9P2G9 620 aaPredicted RBP13.43□□□□□ -0.26
TMEM248-203ENST00000418375 TRHDEQ9UKU6 1024 aa13.43□□□□□ -0.26
TMEM248-203ENST00000418375 ZFR2Q9UPR6 939 aaKnown RBP13.43□□□□□ -0.26
TMEM248-203ENST00000418375 ITM2BQ9Y287 266 aa13.43□□□□□ -0.26
TMEM248-203ENST00000418375 JRKLQ9Y4A0 524 aa13.43□□□□□ -0.26
TMEM248-203ENST00000418375 PCDHB9Q9Y5E1 797 aa13.43□□□□□ -0.26
TMEM248-203ENST00000418375 RAI2Q9Y5P3 530 aa13.43□□□□□ -0.26
TMEM248-203ENST00000418375 CEP295Q9C0D2 2601 aa13.42□□□□□ -0.26
TMEM248-203ENST00000418375 SPAARA0A1B0GVQ0 90 aa13.42□□□□□ -0.26
TMEM248-203ENST00000418375 PRAMEF26H0Y7S4 382 aa13.42□□□□□ -0.26
TMEM248-203ENST00000418375 RIOK3O14730 519 aaKnown RBP13.42□□□□□ -0.26
TMEM248-203ENST00000418375 SLC31A1O15431 190 aa13.42□□□□□ -0.26
TMEM248-203ENST00000418375 SPINT1O43278 529 aa13.42□□□□□ -0.26
TMEM248-203ENST00000418375 CD59P13987 128 aa13.42□□□□□ -0.26
TMEM248-203ENST00000418375 SPINK2P20155 84 aa13.42□□□□□ -0.26
TMEM248-203ENST00000418375 RBL1P28749 1068 aa13.42□□□□□ -0.26
TMEM248-203ENST00000418375 AKT2P31751 481 aa13.42□□□□□ -0.26
TMEM248-203ENST00000418375 CD86P42081 329 aa13.42□□□□□ -0.26
TMEM248-203ENST00000418375 EPHB1P54762 984 aa13.42□□□□□ -0.26
TMEM248-203ENST00000418375 FAM193AP78312 1265 aa13.42□□□□□ -0.26
TMEM248-203ENST00000418375 NIPAL4Q0D2K0 466 aa13.42□□□□□ -0.26
TMEM248-203ENST00000418375 WASHC5Q12768 1159 aa13.42□□□□□ -0.26
TMEM248-203ENST00000418375 GRIK2Q13002 908 aa13.42□□□□□ -0.26
TMEM248-203ENST00000418375 SLC14A1Q13336 389 aa13.42□□□□□ -0.26
TMEM248-203ENST00000418375 TMEM52BQ4KMG9 183 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms