RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 CPXM2Q8N436 756 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 CNTD1Q8N815 330 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 RLN3Q8WXF3 142 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 FATE1Q969F0 183 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 ZNF599Q96NL3 588 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 FCRL5Q96RD9 977 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 SH3GL2Q99962 352 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 SCNM1Q9BWG6 230 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 TMBIM4Q9HC24 238 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 LRRC4CQ9HCJ2 640 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 UBA2Q9UBT2 640 aaPredicted RBP13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 PKD1L2Q7Z442 2459 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 EXOC1LA0A1B0GW35 172 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 SDR42E2A6NKP2 422 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 AP3B1O00203 1094 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 RGS16O15492 202 aaPredicted RBP13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 KDELR3O43731 214 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 GREM1O60565 184 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 PMPCBO75439 489 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 GRIA1P42261 906 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 MAPK8P45983 427 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 SLCO1A2P46721 670 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 SLC10A7Q0GE19 358 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 MESP2Q0VG99 397 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 TRIM61Q5EBN2 209 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 NAPEPLDQ6IQ20 393 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 ZNF783Q6ZMS7 281 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 ARMCX6Q7L4S7 300 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 FRMD1Q8N878 549 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 IPMKQ8NFU5 416 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 OR52K1Q8NGK4 314 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 GATA6Q92908 595 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 ARL8AQ96BM9 186 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 LRRC39Q96DD0 335 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 PKNOX2Q96KN3 472 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 ROPN1BQ9BZX4 212 aaPredicted RBP13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 SLC25A51Q9H1U9 297 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 ROPN1Q9HAT0 212 aaPredicted RBP13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 BFARQ9NZS9 450 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 SAMD15Q9P1V8 674 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 VPS18Q9P253 973 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 TBC1D14Q9P2M4 693 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 ZC3H7BQ9UGR2 993 aaKnown RBP13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 VPS28Q9UK41 221 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 TBC1D30Q9Y2I9 924 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 TMEM8BA6NDV4 472 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 POC1B-GALNT4F8VUJ3 575 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 SLC9A3R1O14745 358 aaPredicted RBP13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 USP12O75317 370 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 SPAG6O75602 509 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 ALDH1A2O94788 518 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 KLF8O95600 359 aaPredicted RBP13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 CYP17A1P05093 508 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 TSHRP16473 764 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 MGAT1P26572 445 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 SSTR1P30872 391 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 PTGER3P43115 390 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 SLC6A11P48066 632 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 MRPS21P82921 87 aaKnown RBP13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 CBX1P83916 185 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 LONRF1Q17RB8 773 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 AGBL2Q5U5Z8 902 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 KCTD16Q68DU8 428 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 LPCAT2Q7L5N7 544 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 IGDCC3Q8IVU1 814 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 FAM217AQ8IXS0 508 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 TMEFF1Q8IYR6 380 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 TXNDC5Q8NBS9 432 aaKnown RBP13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 SPATA22Q8NHS9 363 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 EPS8L3Q8TE67 593 aaKnown RBP13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 MRRFQ96E11 262 aaKnown RBP13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 STAMBPL1Q96FJ0 436 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 OXNAD1Q96HP4 312 aaPredicted RBP13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 ATP6V1G3Q96LB4 118 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 TBL1YQ9BQ87 522 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 APOL2Q9BQE5 337 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 MLPHQ9BV36 600 aaPredicted RBP13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 FICDQ9BVA6 458 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 CINPQ9BW66 212 aaPredicted RBP13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 FSD1LQ9BXM9 530 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 STMN4Q9H169 189 aaPredicted RBP13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 ZDHHC4Q9NPG8 344 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 PIH1D1Q9NWS0 290 aaKnown RBP13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 PLK2Q9NYY3 685 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 SEPT3Q9UH03 358 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 EVLQ9UI08 416 aaPredicted RBP13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 TEX264Q9Y6I9 313 aa13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 ASCC3Q8N3C0 2202 aaKnown RBP13.31□□□□□ -0.28
HLA-DMB-258ENST00000418107 CACNA1EQ15878 2313 aa13.3□□□□□ -0.28
HLA-DMB-258ENST00000418107 SRRM3A6NNA2 597 aaPredicted RBP13.3□□□□□ -0.28
HLA-DMB-258ENST00000418107 HMGB1P1B2RPK0 211 aaPredicted RBP13.3□□□□□ -0.28
HLA-DMB-258ENST00000418107 MAP3K13O43283 966 aa13.3□□□□□ -0.28
HLA-DMB-258ENST00000418107 HYAL3O43820 417 aaPredicted RBP13.3□□□□□ -0.28
HLA-DMB-258ENST00000418107 SUN1O94901 812 aa13.3□□□□□ -0.28
HLA-DMB-258ENST00000418107 PEX11BO96011 259 aa13.3□□□□□ -0.28
HLA-DMB-258ENST00000418107 MT-CYBP00156 380 aaPredicted RBP13.3□□□□□ -0.28
HLA-DMB-258ENST00000418107 CHRM1P11229 460 aaPredicted RBP13.3□□□□□ -0.28
HLA-DMB-258ENST00000418107 HOXD9P28356 352 aaPredicted RBP13.3□□□□□ -0.28
HLA-DMB-258ENST00000418107 MZF1P28698 734 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms