RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 RAPH1Q70E73 1250 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 OR6P1Q8NGX9 317 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 RDH11Q8TC12 318 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 WFDC5Q8TCV5 224 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 OTUB2Q96DC9 234 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 ABCB8Q9NUT2 735 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 COPG2Q9UBF2 871 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.88■□□□□ 0.29
SSBP3-205ENST00000417664 ANKRD66B4E2M5 251 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 SCAMP3O14828 347 aaKnown RBP16.88■□□□□ 0.29
SSBP3-205ENST00000417664 GSRP00390 522 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 EPCAMP16422 314 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 RPL26P61254 145 aaKnown RBP16.88■□□□□ 0.29
SSBP3-205ENST00000417664 ERVK-21P61565 698 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 MPP1Q00013 466 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 CHI3L2Q15782 390 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 PLEKHG6Q3KR16 790 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 FASTKD1Q53R41 847 aaKnown RBP16.88■□□□□ 0.29
SSBP3-205ENST00000417664 LINGO4Q6UY18 593 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 TCEAL4Q96EI5 215 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 TSPAN17Q96FV3 270 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 EXOC2Q96KP1 924 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 THAP1Q9NVV9 213 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 NLE1Q9NVX2 485 aaPredicted RBP16.88■□□□□ 0.29
SSBP3-205ENST00000417664 TMEM216Q9P0N5 145 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 RPL26L1Q9UNX3 145 aaKnown RBP16.88■□□□□ 0.29
SSBP3-205ENST00000417664 ACOT9Q9Y305 439 aa16.88■□□□□ 0.29
SSBP3-205ENST00000417664 A0A087X1B8 175 aa16.87■□□□□ 0.29
SSBP3-205ENST00000417664 NRG2O14511 850 aaPredicted RBP16.87■□□□□ 0.29
SSBP3-205ENST00000417664 DCTN3O75935 186 aa16.87■□□□□ 0.29
SSBP3-205ENST00000417664 GLP2RO95838 553 aa16.87■□□□□ 0.29
SSBP3-205ENST00000417664 OGNP20774 298 aaKnown RBP16.87■□□□□ 0.29
SSBP3-205ENST00000417664 NUMBP49757 651 aa16.87■□□□□ 0.29
SSBP3-205ENST00000417664 KPNA2P52292 529 aaKnown RBP16.87■□□□□ 0.29
SSBP3-205ENST00000417664 SLC12A2P55011 1212 aa16.87■□□□□ 0.29
SSBP3-205ENST00000417664 BST1Q10588 318 aa16.87■□□□□ 0.29
SSBP3-205ENST00000417664 LMAN2Q12907 356 aa16.87■□□□□ 0.29
SSBP3-205ENST00000417664 STX3Q13277 289 aa16.87■□□□□ 0.29
SSBP3-205ENST00000417664 TSNAXIP1Q2TAA8 658 aa16.87■□□□□ 0.29
SSBP3-205ENST00000417664 PRSS36Q5K4E3 855 aa16.87■□□□□ 0.29
SSBP3-205ENST00000417664 TPGS1Q6ZTW0 290 aa16.87■□□□□ 0.29
SSBP3-205ENST00000417664 TTC16Q8NEE8 873 aa16.87■□□□□ 0.29
SSBP3-205ENST00000417664 C19orf43Q9BQ61 176 aa16.87■□□□□ 0.29
SSBP3-205ENST00000417664 MECRQ9BV79 373 aa16.87■□□□□ 0.29
SSBP3-205ENST00000417664 CAB39LQ9H9S4 337 aa16.87■□□□□ 0.29
SSBP3-205ENST00000417664 NMRAL1Q9HBL8 299 aa16.87■□□□□ 0.29
SSBP3-205ENST00000417664 ARL5AQ9Y689 179 aa16.87■□□□□ 0.29
SSBP3-205ENST00000417664 SNNO75324 88 aaPredicted RBP16.86■□□□□ 0.29
SSBP3-205ENST00000417664 H2AFYO75367 372 aaKnown RBP16.86■□□□□ 0.29
SSBP3-205ENST00000417664 HAUS5O94927 633 aa16.86■□□□□ 0.29
SSBP3-205ENST00000417664 PAPLNO95428 1278 aa16.86■□□□□ 0.29
SSBP3-205ENST00000417664 TOP3BO95985 862 aaKnown RBP16.86■□□□□ 0.29
SSBP3-205ENST00000417664 PENKP01210 267 aaPredicted RBP16.86■□□□□ 0.29
SSBP3-205ENST00000417664 CPA3P15088 417 aa16.86■□□□□ 0.29
SSBP3-205ENST00000417664 ARSDP51689 593 aa16.86■□□□□ 0.29
SSBP3-205ENST00000417664 ZNF140P52738 457 aaPredicted RBP16.86■□□□□ 0.29
SSBP3-205ENST00000417664 PRKAA2P54646 552 aa16.86■□□□□ 0.29
SSBP3-205ENST00000417664 OCRLQ01968 901 aa16.86■□□□□ 0.29
SSBP3-205ENST00000417664 GPM6BQ13491 265 aa16.86■□□□□ 0.29
SSBP3-205ENST00000417664 PCLAFQ15004 111 aa16.86■□□□□ 0.29
SSBP3-205ENST00000417664 SETDB1Q15047 1291 aa16.86■□□□□ 0.29
SSBP3-205ENST00000417664 C16orf46Q6P387 395 aa16.86■□□□□ 0.29
SSBP3-205ENST00000417664 GLT6D1Q7Z4J2 308 aa16.86■□□□□ 0.29
SSBP3-205ENST00000417664 PTAR1Q7Z6K3 402 aaPredicted RBP16.86■□□□□ 0.29
SSBP3-205ENST00000417664 SDCCAG8Q86SQ7 713 aaPredicted RBP16.86■□□□□ 0.29
SSBP3-205ENST00000417664 APCDD1Q8J025 514 aa16.86■□□□□ 0.29
SSBP3-205ENST00000417664 PPP1R14CQ8TAE6 165 aa16.86■□□□□ 0.29
SSBP3-205ENST00000417664 C10orf82Q8WW14 230 aa16.86■□□□□ 0.29
SSBP3-205ENST00000417664 LMLNQ96KR4 655 aa16.86■□□□□ 0.29
SSBP3-205ENST00000417664 TBATAQ96M53 351 aa16.86■□□□□ 0.29
SSBP3-205ENST00000417664 NSMCE3Q96MG7 304 aa16.86■□□□□ 0.29
SSBP3-205ENST00000417664 PRDM4Q9UKN5 801 aa16.86■□□□□ 0.29
SSBP3-205ENST00000417664 PCDHGC4Q9Y5F7 938 aa16.86■□□□□ 0.29
SSBP3-205ENST00000417664 SLC9A3R1O14745 358 aaPredicted RBP16.85■□□□□ 0.29
SSBP3-205ENST00000417664 FZD6O60353 706 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 CSPG5O95196 566 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 SERPINE1P05121 402 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 PRKCGP05129 697 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 CA3P07451 260 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 SLC35E2BP0CK96 405 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 LPOP22079 712 aaPredicted RBP16.85■□□□□ 0.29
SSBP3-205ENST00000417664 WEE1P30291 646 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 ABCG1P45844 678 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 GRIA4P48058 902 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 USP4Q13107 963 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 DMC1Q14565 340 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 DLG2Q15700 870 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 ZNF77Q15935 545 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 SPDYAQ5MJ70 313 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 MBLAC2Q68D91 279 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 PLD6Q8N2A8 252 aaKnown RBP16.85■□□□□ 0.29
SSBP3-205ENST00000417664 LPCAT1Q8NF37 534 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 OR4L1Q8NH43 312 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 BHMTQ93088 406 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 ISG20Q96AZ6 181 aaKnown RBP16.85■□□□□ 0.29
SSBP3-205ENST00000417664 CDKN2AIPNLQ96HQ2 116 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 ELMO2Q96JJ3 720 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 DNAJC1Q96KC8 554 aaKnown RBP16.85■□□□□ 0.29
SSBP3-205ENST00000417664 TCF12Q99081 682 aa16.85■□□□□ 0.29
SSBP3-205ENST00000417664 SIKE1Q9BRV8 207 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms