RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 NIPAL4Q0D2K0 466 aa10.3□□□□□ -0.76
HDLBP-206ENST00000417540 EIF2B5Q13144 721 aaKnown RBP10.3□□□□□ -0.76
HDLBP-206ENST00000417540 PDE1CQ14123 709 aaPredicted RBP10.3□□□□□ -0.76
HDLBP-206ENST00000417540 ACAP1Q15027 740 aa10.3□□□□□ -0.76
HDLBP-206ENST00000417540 TRIP6Q15654 476 aaKnown RBP10.3□□□□□ -0.76
HDLBP-206ENST00000417540 BOLA3Q53S33 107 aa10.3□□□□□ -0.76
HDLBP-206ENST00000417540 ZFYVE27Q5T4F4 411 aa10.3□□□□□ -0.76
HDLBP-206ENST00000417540 AADACL2Q6P093 401 aa10.3□□□□□ -0.76
HDLBP-206ENST00000417540 MFSD7Q6UXD7 560 aa10.3□□□□□ -0.76
HDLBP-206ENST00000417540 Q6ZSR6 202 aa10.3□□□□□ -0.76
HDLBP-206ENST00000417540 MICALCLQ6ZW33 695 aa10.3□□□□□ -0.76
HDLBP-206ENST00000417540 PLPP6Q8IY26 295 aa10.3□□□□□ -0.76
HDLBP-206ENST00000417540 EID2Q8N6I1 236 aa10.3□□□□□ -0.76
HDLBP-206ENST00000417540 PDCD6IPQ8WUM4 868 aaKnown RBP10.3□□□□□ -0.76
HDLBP-206ENST00000417540 RNF25Q96BH1 459 aaPredicted RBP10.3□□□□□ -0.76
HDLBP-206ENST00000417540 PSKH2Q96QS6 385 aa10.3□□□□□ -0.76
HDLBP-206ENST00000417540 LGMNQ99538 433 aa10.3□□□□□ -0.76
HDLBP-206ENST00000417540 SLC17A9Q9BYT1 436 aa10.3□□□□□ -0.76
HDLBP-206ENST00000417540 SLC32A1Q9H598 525 aa10.3□□□□□ -0.76
HDLBP-206ENST00000417540 SUV39H2Q9H5I1 410 aa10.3□□□□□ -0.76
HDLBP-206ENST00000417540 RCOR3Q9P2K3 495 aaPredicted RBP10.3□□□□□ -0.76
HDLBP-206ENST00000417540 SEPT3Q9UH03 358 aa10.3□□□□□ -0.76
HDLBP-206ENST00000417540 ANGPTL2Q9UKU9 493 aa10.3□□□□□ -0.76
HDLBP-206ENST00000417540 U3KQA8 63 aa10.3□□□□□ -0.76
HDLBP-206ENST00000417540 GOLGA4Q13439 2230 aaKnown RBP10.29□□□□□ -0.76
HDLBP-206ENST00000417540 ASXL3Q9C0F0 2248 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 KCNK1O00180 336 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 TRIM38O00635 465 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 RIOK3O14730 519 aaKnown RBP10.29□□□□□ -0.76
HDLBP-206ENST00000417540 SPOPO43791 374 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 PCDHGA12O60330 932 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 LCA5LO95447 670 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 PDHA1P08559 390 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 KRT10P13645 584 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 KDELR1P24390 212 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 SERPINA4P29622 427 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 GRK6P43250 576 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 ACADVLP49748 655 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 LIG3P49916 1009 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 PFN3P60673 137 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 SFSWAPQ12872 951 aaKnown RBP10.29□□□□□ -0.76
HDLBP-206ENST00000417540 STAT4Q14765 748 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 NOMO1Q15155 1222 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 HADHQ16836 314 aaKnown RBP10.29□□□□□ -0.76
HDLBP-206ENST00000417540 UGP2Q16851 508 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 WSCD2Q2TBF2 565 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 TMEM52BQ4KMG9 183 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 DHRS13Q6UX07 377 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 DBX2Q6ZNG2 339 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 RAB44Q7Z6P3 723 aaPredicted RBP10.29□□□□□ -0.76
HDLBP-206ENST00000417540 RFX6Q8HWS3 928 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 SFTPA2Q8IWL1 248 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 MFSD2AQ8NA29 543 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 KCTD6Q8NC69 237 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 ZNF548Q8NEK5 533 aaPredicted RBP10.29□□□□□ -0.76
HDLBP-206ENST00000417540 RHBDD1Q8TEB9 315 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 MAML1Q92585 1016 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 GATA6Q92908 595 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 CNDP2Q96KP4 475 aaKnown RBP10.29□□□□□ -0.76
HDLBP-206ENST00000417540 OLFM3Q96PB7 478 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 NUDCD1Q96RS6 583 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 FAM118BQ9BPY3 351 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 LRRC61Q9BV99 259 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 C1QTNF2Q9BXJ5 285 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 LACRTQ9GZZ8 138 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 ATP13A3Q9H7F0 1226 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 SCUBE2Q9NQ36 999 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 DNAJC28Q9NX36 388 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 SAE1Q9UBE0 346 aaPredicted RBP10.29□□□□□ -0.76
HDLBP-206ENST00000417540 DKK3Q9UBP4 350 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 FTSJ1Q9UET6 329 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 OR1A2Q9Y585 309 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 PCDHGB2Q9Y5G2 931 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 PCDHA13Q9Y5I0 950 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 DUSP10Q9Y6W6 482 aa10.29□□□□□ -0.76
HDLBP-206ENST00000417540 RP1P56715 2156 aa10.28□□□□□ -0.76
HDLBP-206ENST00000417540 GRID2IPA4D2P6 1211 aa10.28□□□□□ -0.76
HDLBP-206ENST00000417540 HTRA2O43464 458 aaPredicted RBP10.28□□□□□ -0.76
HDLBP-206ENST00000417540 PIAS2O75928 621 aa10.28□□□□□ -0.76
HDLBP-206ENST00000417540 DKK1O94907 266 aa10.28□□□□□ -0.76
HDLBP-206ENST00000417540 NDUFA10O95299 355 aa10.28□□□□□ -0.76
HDLBP-206ENST00000417540 SLC4A1P02730 911 aa10.28□□□□□ -0.76
HDLBP-206ENST00000417540 ITGAVP06756 1048 aa10.28□□□□□ -0.76
HDLBP-206ENST00000417540 MMP2P08253 660 aa10.28□□□□□ -0.76
HDLBP-206ENST00000417540 C1SP09871 688 aa10.28□□□□□ -0.76
HDLBP-206ENST00000417540 MAGEA1P43355 309 aa10.28□□□□□ -0.76
HDLBP-206ENST00000417540 ZNF135P52742 658 aaPredicted RBP10.28□□□□□ -0.76
HDLBP-206ENST00000417540 AP1S1P61966 158 aa10.28□□□□□ -0.76
HDLBP-206ENST00000417540 SHC2P98077 582 aa10.28□□□□□ -0.76
HDLBP-206ENST00000417540 BCL2L1Q07817 233 aa10.28□□□□□ -0.76
HDLBP-206ENST00000417540 SLC14A1Q13336 389 aa10.28□□□□□ -0.76
HDLBP-206ENST00000417540 CFAP58Q5T655 872 aa10.28□□□□□ -0.76
HDLBP-206ENST00000417540 KAZNQ674X7 775 aa10.28□□□□□ -0.76
HDLBP-206ENST00000417540 DENND2CQ68D51 928 aa10.28□□□□□ -0.76
HDLBP-206ENST00000417540 SLC9A4Q6AI14 798 aa10.28□□□□□ -0.76
HDLBP-206ENST00000417540 DPPA4Q7L190 304 aa10.28□□□□□ -0.76
HDLBP-206ENST00000417540 TTC7BQ86TV6 843 aa10.28□□□□□ -0.76
HDLBP-206ENST00000417540 PARGQ86W56 976 aa10.28□□□□□ -0.76
HDLBP-206ENST00000417540 RHOT2Q8IXI1 618 aa10.28□□□□□ -0.76
HDLBP-206ENST00000417540 TEX26Q8N6G2 289 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms