RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 INPP4BO15327 924 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 ATG7O95352 703 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 ARIH2O95376 493 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 ALOX5P09917 674 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 SFNP31947 248 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 ARL1P40616 181 aaPredicted RBP14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 HLCSP50747 726 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 PLA2G16P53816 162 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 AQP6Q13520 282 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 ZNF460Q14592 562 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 INPP5AQ14642 412 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 IMPG1Q17R60 797 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 SLFN12LQ6IEE8 588 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 USP43Q70EL4 1123 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 OR52K1Q8NGK4 314 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 TRAPPC12Q8WVT3 735 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 TOP1MTQ969P6 601 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 MUS81Q96NY9 551 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 TWNKQ96RR1 684 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 CYP4F12Q9HCS2 524 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 PDGFCQ9NRA1 345 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 RBPJLQ9UBG7 517 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 IFT52Q9Y366 437 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 LAMA2P24043 3122 aaKnown RBP14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 H2AFYO75367 372 aaKnown RBP14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 RSL1D1O76021 490 aaKnown RBP14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 SNRPB2P08579 225 aaKnown RBP14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 ATXN1P54253 815 aaKnown RBP14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 TPD52P55327 224 aaPredicted RBP14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 GRSF1Q12849 480 aaKnown RBP eCLIP14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 CCNYL2Q5T2Q4 361 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 ATAD3BQ5T9A4 648 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 LSMEM2Q8N112 164 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 SFRP1Q8N474 314 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 SLC10A4Q96EP9 437 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 HEXIM2Q96MH2 286 aaKnown RBP14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 APOL2Q9BQE5 337 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 CCDC90BQ9GZT6 254 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 ADAMTS10Q9H324 1103 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 ATP13A3Q9H7F0 1226 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 ZNF302Q9NR11 478 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 GDAP2Q9NXN4 497 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 SNX9Q9Y5X1 595 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 MCM3APO60318 1980 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 NRP2O60462 931 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 BCAS1O75363 584 aaPredicted RBP14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 MBL2P11226 248 aaPredicted RBP14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 RPS9P46781 194 aaKnown RBP14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 OAZ1P54368 228 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 PPIL2Q13356 520 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 CAPRIN1Q14444 709 aaKnown RBP14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 USP10Q14694 798 aaKnown RBP14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 CYP51A1Q16850 503 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 DUOXA2Q1HG44 320 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 HSDL1Q3SXM5 330 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 INTS11Q5TA45 600 aaKnown RBP14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 BROXQ5VW32 411 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 FAM183BPQ6ZVS7 135 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 AKAP14Q86UN6 197 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 MMAAQ8IVH4 418 aaKnown RBP14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 HTR3CQ8WXA8 447 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 MFSD3Q96ES6 412 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 PSD2Q9BQI7 771 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 FUNDC2Q9BWH2 189 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 CHRAC1Q9NRG0 131 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 IARS2Q9NSE4 1012 aaKnown RBP14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 CCM2LQ9NUG4 571 aaPredicted RBP14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 TBC1D13Q9NVG8 400 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 MAP3K20Q9NYL2 800 aaKnown RBP14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 C2CD4BA6NLJ0 364 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 SPATA31C2B4DYI2 1134 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 SLCO1B7G3V0H7 640 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 ALBP02768 609 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 MPOP05164 745 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 MTHFD1P11586 935 aaKnown RBP14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 ASPAP45381 313 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 IFITM2Q01629 132 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 TRIM32Q13049 653 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 BOLA3Q53S33 107 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 CYBRD1Q53TN4 286 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 FAM209AQ5JX71 171 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 ZNF773Q6PK81 442 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 TMC5Q6UXY8 1006 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 ZYG11AQ6WRX3 759 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 ILDR2Q71H61 639 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 HEATR4Q86WZ0 1026 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 LRRC71Q8N4P6 559 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 PDPRQ8NCN5 879 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 HMGCLL1Q8TB92 370 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 CENPNQ96H22 339 aaPredicted RBP14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 ZNF641Q96N77 438 aaPredicted RBP14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 SEPHS2Q99611 448 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 SEZ6LQ9BYH1 1024 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 DNMT3BQ9UBC3 853 aaKnown RBP14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 XPR1Q9UBH6 696 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 DKK3Q9UBP4 350 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 CD300AQ9UGN4 299 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 TLL2Q9Y6L7 1015 aa14.79□□□□□ -0.04
NCKIPSD-204ENST00000416649 NEMP2A6NFY4 417 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms