RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 DNAJB3Q8WWF6 145 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 EME1Q96AY2 570 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 SGF29Q96ES7 293 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 CDCA5Q96FF9 252 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 TSPAN17Q96FV3 270 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 PCED1BQ96HM7 432 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 TRMOQ9BU70 441 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 SLC25A23Q9BV35 468 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 TSPYL2Q9H2G4 693 aaPredicted RBP9.86□□□□□ -0.83
CD44-206ENST00000415148 IGSF5Q9NSI5 407 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 ARHGEF38Q9NXL2 777 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 FBXO5Q9UKT4 447 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 SNX10Q9Y5X0 201 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 PSMD12O00232 456 aaPredicted RBP9.86□□□□□ -0.83
CD44-206ENST00000415148 MAFKO60675 156 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 SNRPB2P08579 225 aaKnown RBP9.86□□□□□ -0.83
CD44-206ENST00000415148 CKMT2P17540 419 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 HOXC13P31276 330 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 SLC26A3P40879 764 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 ACADVLP49748 655 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 YBX1P67809 324 aaKnown RBP9.86□□□□□ -0.83
CD44-206ENST00000415148 EIF4EBP2Q13542 120 aaPredicted RBP9.86□□□□□ -0.83
CD44-206ENST00000415148 IRF5Q13568 498 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 FASTKQ14296 549 aaKnown RBP9.86□□□□□ -0.83
CD44-206ENST00000415148 POU6F1Q14863 301 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 ACAP2Q15057 778 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 MYLKQ15746 1914 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 PPP1R3AQ16821 1122 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 SAMD4BQ5PRF9 694 aaKnown RBP9.86□□□□□ -0.83
CD44-206ENST00000415148 BRMS1LQ5PSV4 323 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 C8orf82Q6P1X6 216 aaPredicted RBP9.86□□□□□ -0.83
CD44-206ENST00000415148 RANBP10Q6VN20 620 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 MOB2Q70IA6 237 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 GPRIN1Q7Z2K8 1008 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 DPP9Q86TI2 863 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 ARHGAP12Q8IWW6 846 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 ATPAF2Q8N5M1 289 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 TSPAN14Q8NG11 270 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 SPATA22Q8NHS9 363 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 LZICQ8WZA0 190 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 PBXIP1Q96AQ6 731 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 MAML3Q96JK9 1138 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 RANBP9Q96S59 729 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 TINF2Q9BSI4 451 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 FICDQ9BVA6 458 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 CATSPERBQ9H7T0 1116 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 CAAP1Q9H8G2 361 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 ARNT2Q9HBZ2 717 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 SPAG4Q9NPE6 437 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 OLAHQ9NV23 265 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 TBC1D13Q9NVG8 400 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 CACNA2D2Q9NY47 1150 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 GTSE1Q9NYZ3 720 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 ZNF510Q9Y2H8 683 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 SQORQ9Y6N5 450 aa9.86□□□□□ -0.83
CD44-206ENST00000415148 MYBPHLA2RUH7 354 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 FBP2O00757 339 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 GPC4O75487 556 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 IGLV3-25P01717 112 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 LTA4HP09960 611 aaKnown RBP9.85□□□□□ -0.83
CD44-206ENST00000415148 TFPTP0C1Z6 253 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 HSPA8P11142 646 aaKnown RBP9.85□□□□□ -0.83
CD44-206ENST00000415148 CPB1P15086 417 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 UGT1A6P19224 532 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 IGFBP6P24592 240 aaPredicted RBP9.85□□□□□ -0.83
CD44-206ENST00000415148 LEPRP48357 1165 aaKnown RBP9.85□□□□□ -0.83
CD44-206ENST00000415148 CLCN5P51795 746 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 IKBKEQ14164 716 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 REP15Q6BDI9 236 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 NEPROQ6NW34 567 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 LAYNQ6UX15 382 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 IPMKQ8NFU5 416 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 RNF34Q969K3 372 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 GFM2Q969S9 779 aaKnown RBP9.85□□□□□ -0.83
CD44-206ENST00000415148 ROPN1LQ96C74 230 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 CELF6Q96J87 481 aaKnown RBP9.85□□□□□ -0.83
CD44-206ENST00000415148 CIB1Q99828 191 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 SLC39A3Q9BRY0 314 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 FNIP2Q9P278 1114 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 TMEM181Q9P2C4 612 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 EBF1Q9UH73 591 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 CIDEBQ9UHD4 219 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 PRORSD1PA6NEY8 169 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 FAM155AB1AL88 458 aaPredicted RBP9.85□□□□□ -0.83
CD44-206ENST00000415148 DFFAO00273 331 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 DDNO94850 711 aaPredicted RBP9.85□□□□□ -0.83
CD44-206ENST00000415148 H6PDO95479 791 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 STAMBPO95630 424 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 MT-CYBP00156 380 aaPredicted RBP9.85□□□□□ -0.83
CD44-206ENST00000415148 MT-CO1P00395 513 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 GNAO1P09471 354 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 HNRNPLP14866 589 aaKnown RBP eCLIP9.85□□□□□ -0.83
CD44-206ENST00000415148 ZNF23P17027 643 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 IMPDH1P20839 514 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 PCSK1P29120 753 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 TUBA4AP68366 448 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 GRB14Q14449 540 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 MFSD10Q14728 455 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 TAC4Q86UU9 113 aa9.85□□□□□ -0.83
CD44-206ENST00000415148 CARM1Q86X55 608 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms