RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 SMPD4Q9NXE4 827 aa13.81□□□□□ -0.2
SMARCA4-202ENST00000413806 MTRF1O75570 445 aaKnown RBP13.81□□□□□ -0.2
SMARCA4-202ENST00000413806 ABCG1P45844 678 aa13.81□□□□□ -0.2
SMARCA4-202ENST00000413806 POLD2P49005 469 aa13.81□□□□□ -0.2
SMARCA4-202ENST00000413806 COL9A3Q14050 684 aaPredicted RBP13.81□□□□□ -0.2
SMARCA4-202ENST00000413806 UBAP2LQ14157 1087 aaKnown RBP13.81□□□□□ -0.2
SMARCA4-202ENST00000413806 INSCQ1MX18 579 aa13.81□□□□□ -0.2
SMARCA4-202ENST00000413806 INTS11Q5TA45 600 aaKnown RBP13.81□□□□□ -0.2
SMARCA4-202ENST00000413806 RAP1GAP2Q684P5 730 aa13.81□□□□□ -0.2
SMARCA4-202ENST00000413806 DPP10Q8N608 796 aa13.81□□□□□ -0.2
SMARCA4-202ENST00000413806 RPS6KA6Q9UK32 745 aa13.81□□□□□ -0.2
SMARCA4-202ENST00000413806 CORO2BQ9UQ03 480 aa13.81□□□□□ -0.2
SMARCA4-202ENST00000413806 GIT1Q9Y2X7 761 aa13.81□□□□□ -0.2
SMARCA4-202ENST00000413806 CLTBP09497 229 aa13.81□□□□□ -0.2
SMARCA4-202ENST00000413806 LSM3P62310 102 aaKnown RBP13.81□□□□□ -0.2
SMARCA4-202ENST00000413806 TRAP1Q12931 704 aaKnown RBP13.81□□□□□ -0.2
SMARCA4-202ENST00000413806 SLC25A52Q3SY17 297 aa13.81□□□□□ -0.2
SMARCA4-202ENST00000413806 ZNF621Q6ZSS3 439 aa13.81□□□□□ -0.2
SMARCA4-202ENST00000413806 MON1BQ7L1V2 547 aa13.81□□□□□ -0.2
SMARCA4-202ENST00000413806 ZBTB46Q86UZ6 589 aa13.81□□□□□ -0.2
SMARCA4-202ENST00000413806 SLC44A1Q8WWI5 657 aa13.81□□□□□ -0.2
SMARCA4-202ENST00000413806 PWWP2AQ96N64 755 aa13.81□□□□□ -0.2
SMARCA4-202ENST00000413806 PDGFDQ9GZP0 370 aaPredicted RBP13.81□□□□□ -0.2
SMARCA4-202ENST00000413806 PTPRHQ9HD43 1115 aa13.81□□□□□ -0.2
SMARCA4-202ENST00000413806 SSNA1O43805 119 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 CATP04040 527 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 BPGMP07738 259 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 ERCC2P18074 760 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 HECTD3Q5T447 861 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 ZNF549Q6P9A3 640 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 DNAJC14Q6Y2X3 702 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 C16orf59Q7L2K0 433 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 TAF8Q7Z7C8 310 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 ULK2Q8IYT8 1036 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 ZNF614Q8N883 585 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 PROX1Q92786 737 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 PIGUQ9H490 435 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 CLK4Q9HAZ1 481 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 DNAAF2Q9NVR5 837 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 ZNF224Q9NZL3 707 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 AP4B1Q9Y6B7 739 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 FARP2O94887 1054 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 CRHR1P34998 444 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 PLCL1Q15111 1095 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 LACTB2Q53H82 288 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 PPP1R26Q5T8A7 1209 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 SAPCD2Q86UD0 394 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 LRRC57Q8N9N7 239 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 HELQQ8TDG4 1101 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 RTKNQ9BST9 563 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 TTYH3Q9C0H2 523 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 LRRC4CQ9HCJ2 640 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 TSPAN4O14817 238 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 HPGDP15428 266 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 HOXB6P17509 224 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 WARSP23381 471 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 RFX3P48380 749 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 EVX2Q03828 476 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 USP4Q13107 963 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 LCLAT1Q6UWP7 414 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 RASSF6Q6ZTQ3 369 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 DEFB128Q7Z7B8 93 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 LGMNQ99538 433 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 NLNQ9BYT8 704 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 SLC39A8Q9C0K1 460 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 DHX33Q9H6R0 707 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 KLQ9UEF7 1012 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 MYL12BO14950 172 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 SNAP91O60641 907 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 MAGEC1O60732 1142 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 XYLBO75191 536 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 PCDH8O95206 1070 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 CNPP09543 421 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 BEX3Q00994 111 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 RIPK1Q13546 671 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 SHROOM1Q2M3G4 852 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 LIN52Q52LA3 116 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 TTC7BQ86TV6 843 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 XYLT1Q86Y38 959 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 C10orf107Q8IVU9 208 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 SELENOMQ8WWX9 145 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 OSBPL6Q9BZF3 934 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 SSU72Q9NP77 194 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 PLIN4Q96Q06 1357 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 MON2Q7Z3U7 1717 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 A0A1W2PPM1 405 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 C4BPAP04003 597 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 DBTP11182 482 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 GRIA3P42263 894 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 GSSP48637 474 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 PYDC2Q56P42 97 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 CHMP1BQ7LBR1 199 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 TMEM110Q86TL2 294 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 JOSD2Q8TAC2 188 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 FGFBP2Q9BYJ0 223 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 TRMT13Q9NUP7 481 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 PCDHGC3Q9UN70 934 aa13.8□□□□□ -0.2
SMARCA4-202ENST00000413806 YDJCA8MPS7 323 aa13.79□□□□□ -0.2
SMARCA4-202ENST00000413806 B4GALT5O43286 388 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms