RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 NUDCD1Q96RS6 583 aa26.49■■□□□ 1.83
VEGFA-207ENST00000413642 MGME1Q9BQP7 344 aa26.49■■□□□ 1.83
VEGFA-207ENST00000413642 ZNF670Q9BS34 389 aa26.49■■□□□ 1.83
VEGFA-207ENST00000413642 TCEAL2Q9H3H9 227 aaPredicted RBP26.49■■□□□ 1.83
VEGFA-207ENST00000413642 SCUBE2Q9NQ36 999 aa26.49■■□□□ 1.83
VEGFA-207ENST00000413642 LZTS3O60299 673 aaPredicted RBP26.48■■□□□ 1.83
VEGFA-207ENST00000413642 NEBLO76041 1014 aa26.48■■□□□ 1.83
VEGFA-207ENST00000413642 CSF2P04141 144 aa26.48■■□□□ 1.83
VEGFA-207ENST00000413642 NME1P15531 152 aaKnown RBP26.48■■□□□ 1.83
VEGFA-207ENST00000413642 GBE1Q04446 702 aa26.48■■□□□ 1.83
VEGFA-207ENST00000413642 GALNT2Q10471 571 aa26.48■■□□□ 1.83
VEGFA-207ENST00000413642 MARC1Q5VT66 337 aa26.48■■□□□ 1.83
VEGFA-207ENST00000413642 NYAP1Q6ZVC0 841 aa26.48■■□□□ 1.83
VEGFA-207ENST00000413642 FAF2Q96CS3 445 aa26.48■■□□□ 1.83
VEGFA-207ENST00000413642 NT5MQ9NPB1 228 aa26.48■■□□□ 1.83
VEGFA-207ENST00000413642 HYOU1Q9Y4L1 999 aa26.48■■□□□ 1.83
VEGFA-207ENST00000413642 CEP295Q9C0D2 2601 aa26.48■■□□□ 1.83
VEGFA-207ENST00000413642 MTA2O94776 668 aa26.47■■□□□ 1.83
VEGFA-207ENST00000413642 KDELR1P24390 212 aa26.47■■□□□ 1.83
VEGFA-207ENST00000413642 HSPA9P38646 679 aaKnown RBP26.47■■□□□ 1.83
VEGFA-207ENST00000413642 GARSP41250 739 aaKnown RBP26.47■■□□□ 1.83
VEGFA-207ENST00000413642 SLC10A2Q12908 348 aaPredicted RBP26.47■■□□□ 1.83
VEGFA-207ENST00000413642 TRAF2Q12933 501 aa26.47■■□□□ 1.83
VEGFA-207ENST00000413642 ZNF211Q13398 564 aaPredicted RBP26.47■■□□□ 1.83
VEGFA-207ENST00000413642 LRRC14Q15048 493 aa26.47■■□□□ 1.83
VEGFA-207ENST00000413642 PTPRRQ15256 657 aa26.47■■□□□ 1.83
VEGFA-207ENST00000413642 RBFAQ8N0V3 343 aa26.47■■□□□ 1.83
VEGFA-207ENST00000413642 OR4C6Q8NH72 309 aa26.47■■□□□ 1.83
VEGFA-207ENST00000413642 PDCD6IPQ8WUM4 868 aaKnown RBP26.47■■□□□ 1.83
VEGFA-207ENST00000413642 NSMCE1Q8WV22 266 aa26.47■■□□□ 1.83
VEGFA-207ENST00000413642 C1QTNF7Q9BXJ2 289 aa26.47■■□□□ 1.83
VEGFA-207ENST00000413642 LCMT1Q9UIC8 334 aa26.47■■□□□ 1.83
VEGFA-207ENST00000413642 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP26.46■■□□□ 1.83
VEGFA-207ENST00000413642 HTRA2O43464 458 aaPredicted RBP26.46■■□□□ 1.83
VEGFA-207ENST00000413642 RFPL3O75679 317 aa26.46■■□□□ 1.83
VEGFA-207ENST00000413642 JUNDP17535 347 aa26.46■■□□□ 1.83
VEGFA-207ENST00000413642 CKMT2P17540 419 aa26.46■■□□□ 1.83
VEGFA-207ENST00000413642 THOP1P52888 689 aa26.46■■□□□ 1.83
VEGFA-207ENST00000413642 FAM182AQ5T1J6 154 aa26.46■■□□□ 1.83
VEGFA-207ENST00000413642 LIPIQ6XZB0 460 aa26.46■■□□□ 1.83
VEGFA-207ENST00000413642 DPPA4Q7L190 304 aa26.46■■□□□ 1.83
VEGFA-207ENST00000413642 GAS2L3Q86XJ1 694 aa26.46■■□□□ 1.83
VEGFA-207ENST00000413642 MAP7D3Q8IWC1 876 aa26.46■■□□□ 1.83
VEGFA-207ENST00000413642 BBS5Q8N3I7 341 aa26.46■■□□□ 1.83
VEGFA-207ENST00000413642 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP26.46■■□□□ 1.83
VEGFA-207ENST00000413642 TEX26Q8N6G2 289 aa26.46■■□□□ 1.83
VEGFA-207ENST00000413642 ZNF548Q8NEK5 533 aaPredicted RBP26.46■■□□□ 1.83
VEGFA-207ENST00000413642 RFFLQ8WZ73 363 aa26.46■■□□□ 1.83
VEGFA-207ENST00000413642 B4GALT6Q9UBX8 382 aa26.46■■□□□ 1.83
VEGFA-207ENST00000413642 TFR2Q9UP52 801 aa26.46■■□□□ 1.83
VEGFA-207ENST00000413642 PCDHGA1Q9Y5H4 931 aa26.46■■□□□ 1.83
VEGFA-207ENST00000413642 LRRD1A4D1F6 860 aa26.45■■□□□ 1.82
VEGFA-207ENST00000413642 KRT37O76014 449 aa26.45■■□□□ 1.82
VEGFA-207ENST00000413642 GM2AP17900 193 aa26.45■■□□□ 1.82
VEGFA-207ENST00000413642 ARHGAP25P42331 645 aa26.45■■□□□ 1.82
VEGFA-207ENST00000413642 ZNF75DP51815 510 aa26.45■■□□□ 1.82
VEGFA-207ENST00000413642 HNRNPKP61978 463 aaKnown RBP eCLIP26.45■■□□□ 1.828e-7■■■■□ 21.9
VEGFA-207ENST00000413642 IHHQ14623 411 aa26.45■■□□□ 1.82
VEGFA-207ENST00000413642 SMAD1Q15797 465 aaKnown RBP26.45■■□□□ 1.82
VEGFA-207ENST00000413642 RHOT2Q8IXI1 618 aa26.45■■□□□ 1.82
VEGFA-207ENST00000413642 KDF1Q8NAX2 398 aaPredicted RBP26.45■■□□□ 1.82
VEGFA-207ENST00000413642 PLA2G15Q8NCC3 412 aa26.45■■□□□ 1.82
VEGFA-207ENST00000413642 RNF157Q96PX1 679 aa26.45■■□□□ 1.82
VEGFA-207ENST00000413642 ZMIZ1Q9ULJ6 1067 aa26.45■■□□□ 1.82
VEGFA-207ENST00000413642 COL5A1P20908 1838 aaPredicted RBP26.44■■□□□ 1.82
VEGFA-207ENST00000413642 C3orf70A6NLC5 250 aaPredicted RBP26.44■■□□□ 1.82
VEGFA-207ENST00000413642 K7ESM1 405 aa26.44■■□□□ 1.82
VEGFA-207ENST00000413642 RECQL5O94762 991 aaPredicted RBP26.44■■□□□ 1.82
VEGFA-207ENST00000413642 PCCBP05166 539 aa26.44■■□□□ 1.82
VEGFA-207ENST00000413642 TNNT1P13805 278 aa26.44■■□□□ 1.82
VEGFA-207ENST00000413642 YPEL5P62699 121 aa26.44■■□□□ 1.82
VEGFA-207ENST00000413642 POLR2LP62875 67 aaKnown RBP26.44■■□□□ 1.82
VEGFA-207ENST00000413642 C1orf61Q13536 156 aa26.44■■□□□ 1.82
VEGFA-207ENST00000413642 INPP5AQ14642 412 aa26.44■■□□□ 1.82
VEGFA-207ENST00000413642 LRRC49Q8IUZ0 686 aa26.44■■□□□ 1.82
VEGFA-207ENST00000413642 LMX1AQ8TE12 382 aa26.44■■□□□ 1.82
VEGFA-207ENST00000413642 MAML1Q92585 1016 aa26.44■■□□□ 1.82
VEGFA-207ENST00000413642 SEMA3CQ99985 751 aa26.44■■□□□ 1.82
VEGFA-207ENST00000413642 OR1A2Q9Y585 309 aa26.44■■□□□ 1.82
VEGFA-207ENST00000413642 MAP1BP46821 2468 aaKnown RBP26.44■■□□□ 1.82
VEGFA-207ENST00000413642 SCAMP1O15126 338 aa26.43■■□□□ 1.82
VEGFA-207ENST00000413642 CPP00450 1065 aa26.43■■□□□ 1.82
VEGFA-207ENST00000413642 MAGEA1P43355 309 aa26.43■■□□□ 1.82
VEGFA-207ENST00000413642 ITKQ08881 620 aa26.43■■□□□ 1.82
VEGFA-207ENST00000413642 PTK2BQ14289 1009 aa26.43■■□□□ 1.82
VEGFA-207ENST00000413642 PHACTR4Q8IZ21 702 aa26.43■■□□□ 1.82
VEGFA-207ENST00000413642 ZCCHC14Q8WYQ9 949 aaKnown RBP26.43■■□□□ 1.82
VEGFA-207ENST00000413642 APOLD1Q96LR9 279 aa26.43■■□□□ 1.82
VEGFA-207ENST00000413642 SMIM14Q96QK8 99 aa26.43■■□□□ 1.82
VEGFA-207ENST00000413642 RBM22Q9NW64 420 aaKnown RBP eCLIP26.43■■□□□ 1.824e-11■■■■□ 26.1
VEGFA-207ENST00000413642 NLGN3Q9NZ94 848 aa26.43■■□□□ 1.82
VEGFA-207ENST00000413642 DTLQ9NZJ0 730 aa26.43■■□□□ 1.82
VEGFA-207ENST00000413642 INTUQ9ULD6 942 aa26.43■■□□□ 1.82
VEGFA-207ENST00000413642 AKAP13Q12802 2813 aa26.42■■□□□ 1.82
VEGFA-207ENST00000413642 A0A0U1RQS6 177 aa26.42■■□□□ 1.82
VEGFA-207ENST00000413642 H3BM21 787 aa26.42■■□□□ 1.82
VEGFA-207ENST00000413642 MATN3O15232 486 aa26.42■■□□□ 1.82
VEGFA-207ENST00000413642 SOCS5O75159 536 aa26.42■■□□□ 1.82
VEGFA-207ENST00000413642 GCATO75600 419 aa26.42■■□□□ 1.82
VEGFA-207ENST00000413642 ELFN1P0C7U0 828 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms