RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 GDF3Q9NR23 364 aa10.15□□□□□ -0.78
TMEM248-202ENST00000413593 ATP8A1Q9Y2Q0 1164 aa10.15□□□□□ -0.78
TMEM248-202ENST00000413593 PCDHGB2Q9Y5G2 931 aa10.15□□□□□ -0.78
TMEM248-202ENST00000413593 PCDHA3Q9Y5H8 950 aa10.15□□□□□ -0.78
TMEM248-202ENST00000413593 ADGRG1Q9Y653 693 aa10.15□□□□□ -0.78
TMEM248-202ENST00000413593 HS3ST3A1Q9Y663 406 aa10.15□□□□□ -0.78
TMEM248-202ENST00000413593 NCOR2Q9Y618 2525 aa10.15□□□□□ -0.78
TMEM248-202ENST00000413593 CEP192Q8TEP8 1941 aa10.15□□□□□ -0.79
TMEM248-202ENST00000413593 SPTBN2O15020 2390 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 A0A1B0GTQ1 180 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 A0A1W2PQ67 120 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 CCDC66A2RUB6 948 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 POM121BA6NF01 834 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 A6NNZ2 444 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 KCNK1O00180 336 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 GIPC1O14908 333 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 ARHGAP6O43182 974 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 SH3BP5O60239 455 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 PCDHGA12O60330 932 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 DFNA5O60443 496 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 MAGEC1O60732 1142 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 NEBLO76041 1014 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 TM7SF2O76062 418 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 JCHAINP01591 159 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 HLA-DQB2P05538 268 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 THEGLP0DJG4 465 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 CEACAM1P13688 526 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 PECAM1P16284 738 aaPredicted RBP10.14□□□□□ -0.79
TMEM248-202ENST00000413593 CES1P23141 567 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 CTNNA2P26232 953 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 NR2C2P49116 596 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 PEX5P50542 639 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 POLR2LP62875 67 aaKnown RBP10.14□□□□□ -0.79
TMEM248-202ENST00000413593 FAM193AP78312 1265 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 SEMG2Q02383 582 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 DSC2Q02487 901 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 ITKQ08881 620 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 AP1B1Q10567 949 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 ZBTB17Q13105 803 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 IHHQ14623 411 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 PPP2R5EQ16537 467 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 KAZNQ674X7 775 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 PSAPL1Q6NUJ1 521 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 KYAT3Q6YP21 454 aaKnown RBP10.14□□□□□ -0.79
TMEM248-202ENST00000413593 DBX2Q6ZNG2 339 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 DPPA4Q7L190 304 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 NT5DC3Q86UY8 548 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 CCDC50Q8IVM0 306 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 NAXDQ8IW45 347 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 PAF1Q8N7H5 531 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 CNTD1Q8N815 330 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 CCDC112Q8NEF3 446 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 DEFB124Q8NES8 71 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 OR13H1Q8NG92 308 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 ARRDC2Q8TBH0 407 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 FAM174AQ8TBP5 190 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 PDCD6IPQ8WUM4 868 aaKnown RBP10.14□□□□□ -0.79
TMEM248-202ENST00000413593 CENPTQ96BT3 561 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 BMFQ96LC9 184 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 IL12RB2Q99665 862 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 BRD8Q9H0E9 1235 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 SLC32A1Q9H598 525 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 ERVMER34-1Q9H9K5 563 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 GRPEL1Q9HAV7 217 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 HAUS2Q9NVX0 235 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 SAE1Q9UBE0 346 aaPredicted RBP10.14□□□□□ -0.79
TMEM248-202ENST00000413593 TTLL3Q9Y4R7 772 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 PCDHB9Q9Y5E1 797 aa10.14□□□□□ -0.79
TMEM248-202ENST00000413593 CNOT1A5YKK6 2376 aaKnown RBP10.14□□□□□ -0.79
TMEM248-202ENST00000413593 PI4KAP42356 2102 aa10.13□□□□□ -0.79
TMEM248-202ENST00000413593 MED19A0JLT2 244 aaPredicted RBP10.13□□□□□ -0.79
TMEM248-202ENST00000413593 CFAP69A5D8W1 941 aa10.13□□□□□ -0.79
TMEM248-202ENST00000413593 FPGTO14772 594 aa10.13□□□□□ -0.79
TMEM248-202ENST00000413593 PPP1R12AO14974 1030 aaPredicted RBP10.13□□□□□ -0.79
TMEM248-202ENST00000413593 FZD6O60353 706 aa10.13□□□□□ -0.79
TMEM248-202ENST00000413593 PGLSO95336 258 aa10.13□□□□□ -0.79
TMEM248-202ENST00000413593 CPP00450 1065 aa10.13□□□□□ -0.79
TMEM248-202ENST00000413593 C6P13671 934 aa10.13□□□□□ -0.79
TMEM248-202ENST00000413593 TGM2P21980 687 aa10.13□□□□□ -0.79
TMEM248-202ENST00000413593 RXRGP48443 463 aa10.13□□□□□ -0.79
TMEM248-202ENST00000413593 ARRB1P49407 418 aaPredicted RBP10.13□□□□□ -0.79
TMEM248-202ENST00000413593 LIG3P49916 1009 aa10.13□□□□□ -0.79
TMEM248-202ENST00000413593 RWDD2BP57060 319 aa10.13□□□□□ -0.79
TMEM248-202ENST00000413593 COPS2P61201 443 aa10.13□□□□□ -0.79
TMEM248-202ENST00000413593 IL9RQ01113 521 aa10.13□□□□□ -0.79
TMEM248-202ENST00000413593 NIPAL4Q0D2K0 466 aa10.13□□□□□ -0.79
TMEM248-202ENST00000413593 RALGDSQ12967 914 aa10.13□□□□□ -0.79
TMEM248-202ENST00000413593 AGERQ15109 404 aa10.13□□□□□ -0.79
TMEM248-202ENST00000413593 PRKD1Q15139 912 aaPredicted RBP10.13□□□□□ -0.79
TMEM248-202ENST00000413593 SHBQ15464 509 aa10.13□□□□□ -0.79
TMEM248-202ENST00000413593 KDM7AQ6ZMT4 941 aa10.13□□□□□ -0.79
TMEM248-202ENST00000413593 Q6ZSR6 202 aa10.13□□□□□ -0.79
TMEM248-202ENST00000413593 BBS12Q6ZW61 710 aa10.13□□□□□ -0.79
TMEM248-202ENST00000413593 BZW1Q7L1Q6 419 aaKnown RBP10.13□□□□□ -0.79
TMEM248-202ENST00000413593 PTAR1Q7Z6K3 402 aaPredicted RBP10.13□□□□□ -0.79
TMEM248-202ENST00000413593 LRRC8AQ8IWT6 810 aa10.13□□□□□ -0.79
TMEM248-202ENST00000413593 SYCE1Q8N0S2 351 aa10.13□□□□□ -0.79
TMEM248-202ENST00000413593 SLC22A18ASQ8N1D0 253 aa10.13□□□□□ -0.79
TMEM248-202ENST00000413593 OXR1Q8N573 874 aa10.13□□□□□ -0.79
TMEM248-202ENST00000413593 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms