RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 TMEM259Q4ZIN3 620 aa14.04□□□□□ -0.16
CPNE1-206ENST00000412056 TCEAL6Q6IPX3 200 aa14.04□□□□□ -0.16
CPNE1-206ENST00000412056 KIAA1161Q6NSJ0 714 aa14.04□□□□□ -0.16
CPNE1-206ENST00000412056 NEK5Q6P3R8 708 aa14.04□□□□□ -0.16
CPNE1-206ENST00000412056 ALYREFQ86V81 257 aaKnown RBP14.04□□□□□ -0.16
CPNE1-206ENST00000412056 SPATA22Q8NHS9 363 aa14.04□□□□□ -0.16
CPNE1-206ENST00000412056 C1orf216Q8TAB5 229 aa14.04□□□□□ -0.16
CPNE1-206ENST00000412056 COG1Q8WTW3 980 aa14.04□□□□□ -0.16
CPNE1-206ENST00000412056 SPOCK2Q92563 424 aa14.04□□□□□ -0.16
CPNE1-206ENST00000412056 TCEAL3Q969E4 200 aa14.04□□□□□ -0.16
CPNE1-206ENST00000412056 TADA1Q96BN2 335 aa14.04□□□□□ -0.16
CPNE1-206ENST00000412056 FEM1CQ96JP0 617 aa14.04□□□□□ -0.16
CPNE1-206ENST00000412056 PBKQ96KB5 322 aa14.04□□□□□ -0.16
CPNE1-206ENST00000412056 OSBPL9Q96SU4 736 aa14.04□□□□□ -0.16
CPNE1-206ENST00000412056 TMEM121Q9BTD3 319 aa14.04□□□□□ -0.16
CPNE1-206ENST00000412056 WRAP53Q9BUR4 548 aaKnown RBP14.04□□□□□ -0.16
CPNE1-206ENST00000412056 SEMA4GQ9NTN9 838 aa14.04□□□□□ -0.16
CPNE1-206ENST00000412056 UBP1Q9NZI7 540 aa14.04□□□□□ -0.16
CPNE1-206ENST00000412056 A0A1W2PQ67 120 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 IGLON5A6NGN9 336 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 WNT9AO14904 365 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 SLC31A1O15431 190 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 MMP20O60882 483 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 CFIP05156 583 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 TGM1P22735 817 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 HOXD12P35452 270 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 DPP6P42658 865 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 SUOXP51687 545 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 FAM193AP78312 1265 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 SNX1Q13596 522 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 PTPRRQ15256 657 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 SF3A2Q15428 464 aaKnown RBP14.03□□□□□ -0.16
CPNE1-206ENST00000412056 PCSK7Q16549 785 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 LONRF2Q1L5Z9 754 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 TMEM52BQ4KMG9 183 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 SETMARQ53H47 684 aaPredicted RBP14.03□□□□□ -0.16
CPNE1-206ENST00000412056 ANKRD20A2Q5SQ80 823 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 ANKRD20A1Q5TYW2 823 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 ANKRD20A3Q5VUR7 823 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 ERAP2Q6P179 960 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 LAYNQ6UX15 382 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 DPPA4Q7L190 304 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 RASGEF1CQ8N431 466 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 FAM71DQ8N9W8 422 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 LPCAT1Q8NF37 534 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 CCDC110Q8TBZ0 833 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 CXorf40AQ8TE69 158 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 PIH1D2Q8WWB5 315 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 MS4A14Q96JA4 679 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 SLC6A18Q96N87 628 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 SPATA13Q96N96 652 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 SMIM14Q96QK8 99 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 MYOCQ99972 504 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 GBA3Q9H227 469 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 PCDH9Q9HC56 1237 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 FZD3Q9NPG1 666 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 FSCN3Q9NQT6 498 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 VPS45Q9NRW7 570 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 SMARCAL1Q9NZC9 954 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 B4GALT6Q9UBX8 382 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 SUSD2Q9UGT4 822 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 RSPH14Q9UHP6 348 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 TRHDEQ9UKU6 1024 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 TPX2Q9ULW0 747 aaKnown RBP14.03□□□□□ -0.16
CPNE1-206ENST00000412056 PHTF1Q9UMS5 762 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 SNX12Q9UMY4 172 aa14.03□□□□□ -0.16
CPNE1-206ENST00000412056 TDRD6O60522 2096 aaKnown RBP14.02□□□□□ -0.16
CPNE1-206ENST00000412056 A0A1B0GTW7 788 aa14.02□□□□□ -0.17
CPNE1-206ENST00000412056 CFAP69A5D8W1 941 aa14.02□□□□□ -0.17
CPNE1-206ENST00000412056 NPIPB15A6NHN6 443 aaPredicted RBP14.02□□□□□ -0.17
CPNE1-206ENST00000412056 A8MX80 341 aa14.02□□□□□ -0.17
CPNE1-206ENST00000412056 FANCGO15287 622 aa14.02□□□□□ -0.17
CPNE1-206ENST00000412056 BCAT2O15382 392 aaPredicted RBP14.02□□□□□ -0.17
CPNE1-206ENST00000412056 LRP3O75074 770 aa14.02□□□□□ -0.17
CPNE1-206ENST00000412056 PMPCBO75439 489 aa14.02□□□□□ -0.17
CPNE1-206ENST00000412056 STK10O94804 968 aaKnown RBP14.02□□□□□ -0.17
CPNE1-206ENST00000412056 ALPIP09923 528 aa14.02□□□□□ -0.17
CPNE1-206ENST00000412056 ZNF806P0C7X5 589 aa14.02□□□□□ -0.17
CPNE1-206ENST00000412056 CTPS1P17812 591 aa14.02□□□□□ -0.17
CPNE1-206ENST00000412056 CA4P22748 312 aa14.02□□□□□ -0.17
CPNE1-206ENST00000412056 PSMB4P28070 264 aa14.02□□□□□ -0.17
CPNE1-206ENST00000412056 EPHB1P54762 984 aa14.02□□□□□ -0.17
CPNE1-206ENST00000412056 POLR2LP62875 67 aaKnown RBP14.02□□□□□ -0.17
CPNE1-206ENST00000412056 RPS21P63220 83 aaKnown RBP14.02□□□□□ -0.17
CPNE1-206ENST00000412056 OASLQ15646 514 aaKnown RBP14.02□□□□□ -0.17
CPNE1-206ENST00000412056 SLC14A2Q15849 920 aa14.02□□□□□ -0.17
CPNE1-206ENST00000412056 CSRP2Q16527 193 aa14.02□□□□□ -0.17
CPNE1-206ENST00000412056 DUOXA1Q1HG43 343 aa14.02□□□□□ -0.17
CPNE1-206ENST00000412056 TRIM61Q5EBN2 209 aa14.02□□□□□ -0.17
CPNE1-206ENST00000412056 NAPEPLDQ6IQ20 393 aa14.02□□□□□ -0.17
CPNE1-206ENST00000412056 KDELC1Q6UW63 502 aa14.02□□□□□ -0.17
CPNE1-206ENST00000412056 MAIP1Q8WWC4 291 aa14.02□□□□□ -0.17
CPNE1-206ENST00000412056 OXNAD1Q96HP4 312 aaPredicted RBP14.02□□□□□ -0.17
CPNE1-206ENST00000412056 SERAC1Q96JX3 654 aa14.02□□□□□ -0.17
CPNE1-206ENST00000412056 FCRL5Q96RD9 977 aa14.02□□□□□ -0.17
CPNE1-206ENST00000412056 FERMT1Q9BQL6 677 aa14.02□□□□□ -0.17
CPNE1-206ENST00000412056 GORASP1Q9BQQ3 440 aa14.02□□□□□ -0.17
CPNE1-206ENST00000412056 C1QTNF2Q9BXJ5 285 aa14.02□□□□□ -0.17
CPNE1-206ENST00000412056 SLC17A9Q9BYT1 436 aa14.02□□□□□ -0.17
CPNE1-206ENST00000412056 FRMD8P1Q9BZ68 369 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms