RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 LRRC37A3O60309 1634 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ADGRB1O14514 1584 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TTC21BQ7Z4L5 1316 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TYW5A2RUC4 315 aaKnown RBP2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 K7ENM7 598 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PER2O15055 1255 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CEP104O60308 925 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TBX18O95935 607 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SPARCP09486 303 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 RFPL3SP0C7P2 107 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 FCGR2AP12318 317 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SLC2A4P14672 509 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ALOX12P18054 663 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ABCD3P28288 659 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 RFC4P35249 363 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 MAP2K2P36507 400 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 MTNR1AP48039 350 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SOX2P48431 317 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 RXRGP48443 463 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ALDH7A1P49419 539 aaKnown RBP2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SETQ01105 290 aaPredicted RBP2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TFAP4Q01664 338 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 RHAGQ02094 409 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 MTX3Q5HYI7 312 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ITPRIPL1Q6GPH6 555 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 FAM180BQ6P0A1 224 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 MTFR2Q6P444 385 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TMEM81Q6P7N7 255 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CPLX2Q6PUV4 134 aaKnown RBP2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 DLK2Q6UY11 383 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 DEF8Q6ZN54 512 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TECPR1Q7Z6L1 1165 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CCDC25Q86WR0 208 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CHSY1Q86X52 802 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ANKRD13BQ86YJ7 626 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 DDIASQ8IXT1 998 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ZDHHC23Q8IYP9 409 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PDILTQ8N807 584 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 C8orf58Q8NAV2 365 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SLC44A5Q8NCS7 719 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ZNF398Q8TD17 642 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 HDAC7Q8WUI4 952 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TMEM170AQ8WVE7 144 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SNRNP27Q8WVK2 155 aaKnown RBP2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 IP6K1Q92551 441 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SGCDQ92629 289 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 RNF183Q96D59 192 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 RRP36Q96EU6 259 aaKnown RBP2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 RNFT2Q96EX2 444 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PRR11Q96HE9 360 aaPredicted RBP2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 HARBI1Q96MB7 349 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 NUDT16L1Q9BRJ7 211 aaKnown RBP2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 HDHD5Q9BXW7 423 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CTDSP1Q9GZU7 261 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CCDC68Q9H2F9 335 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SH2D4AQ9H788 454 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TXNRD2Q9NNW7 524 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 IL17RBQ9NRM6 502 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TMEM248Q9NWD8 314 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 GGA3Q9NZ52 723 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 UPB1Q9UBR1 384 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 LIMA1Q9UHB6 759 aaKnown RBP2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CDH22Q9UJ99 828 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SARDHQ9UL12 918 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 MTMR6Q9Y217 621 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PAM16Q9Y3D7 125 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PCDHGB5Q9Y5G0 923 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CLDN16Q9Y5I7 305 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 LYVE1Q9Y5Y7 322 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CICQ96RK0 1608 aaPredicted RBP2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 KAT6AQ92794 2004 aa2.75□□□□□ -1.97
RNU6-1140P-201ENST00000410517 QSER1Q2KHR3 1735 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 IFT172Q9UG01 1749 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 OBSCNQ5VST9 7968 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 NHSQ6T4R5 1651 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TOPAZ1Q8N9V7 1692 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CD163L1Q9NR16 1453 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 FSD2A1L4K1 749 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SYNDIG1LA6NDD5 238 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 WIPF3A6NGB9 483 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 USP17L23D6RBM5 183 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PPP6CO00743 305 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 AP3D1O14617 1153 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SPTLC2O15270 562 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 HNRNPCL1O60812 293 aaKnown RBP2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 NDUFS3O75489 264 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SYF2O95926 243 aaKnown RBP2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CD4P01730 458 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CLEC3BP05452 202 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SNHG28P0DPA3 235 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ENO3P13929 434 aaPredicted RBP2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ARSAP15289 507 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TMEM11P17152 192 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ATF7P17544 494 aaPredicted RBP2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SP100P23497 879 aaPredicted RBP2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TBXAS1P24557 533 aaPredicted RBP2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 KLRC2P26717 231 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TYK2P29597 1187 aa2.74□□□□□ -1.97
RNU6-1140P-201ENST00000410517 RFC1P35251 1148 aaPredicted RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms