RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 AP3B1O00203 1094 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 AREL1O15033 823 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 TP73O15350 636 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 LAMTOR5O43504 91 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 AP1G1O43747 822 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 SEC31AO94979 1220 aaKnown RBP15.31■□□□□ 0.04
LSM5-207ENST00000410044 CPP00450 1065 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 TRBC1P01850 177 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 FGF1P05230 155 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 ACADMP11310 421 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 ADRB3P13945 408 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 NFKBIAP25963 317 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 P2RY2P41231 377 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 RPL21P46778 160 aaKnown RBP15.31■□□□□ 0.04
LSM5-207ENST00000410044 GRIA4P48058 902 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 TPMTP51580 245 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 MRPS25P82663 173 aaKnown RBP15.31■□□□□ 0.04
LSM5-207ENST00000410044 PCSK7Q16549 785 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 QPCTQ16769 361 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 PIP5KL1Q5T9C9 394 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 AGBL4Q5VU57 503 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 ANO7Q6IWH7 933 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 CCDC70Q6NSX1 233 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 HIBCHQ6NVY1 386 aaPredicted RBP15.31■□□□□ 0.04
LSM5-207ENST00000410044 FBXL19Q6PCT2 694 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 TTC7BQ86TV6 843 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 HDDC3Q8N4P3 179 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 TAB3Q8N5C8 712 aaPredicted RBP15.31■□□□□ 0.04
LSM5-207ENST00000410044 NELL1Q92832 810 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 MCCC1Q96RQ3 725 aaPredicted RBP15.31■□□□□ 0.04
LSM5-207ENST00000410044 SRPK1Q96SB4 655 aaKnown RBP15.31■□□□□ 0.04
LSM5-207ENST00000410044 OMDQ99983 421 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 FICDQ9BVA6 458 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 C1QTNF1Q9BXJ1 281 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 FSD1LQ9BXM9 530 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 NEUROG2Q9H2A3 272 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 KDM4CQ9H3R0 1056 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 CASS4Q9NQ75 786 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 DMGDHQ9UI17 866 aaKnown RBP15.31■□□□□ 0.04
LSM5-207ENST00000410044 NCKAP1Q9Y2A7 1128 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 SNX24Q9Y343 169 aa15.31■□□□□ 0.04
LSM5-207ENST00000410044 A0A1W2PP55 124 aa15.3■□□□□ 0.04
LSM5-207ENST00000410044 TCRBV7S3A2A0A539 114 aa15.3■□□□□ 0.04
LSM5-207ENST00000410044 RIOK3O14730 519 aaKnown RBP15.3■□□□□ 0.04
LSM5-207ENST00000410044 MLNP12872 115 aa15.3■□□□□ 0.04
LSM5-207ENST00000410044 OXTRP30559 389 aa15.3■□□□□ 0.04
LSM5-207ENST00000410044 TAS2R38P59533 333 aa15.3■□□□□ 0.04
LSM5-207ENST00000410044 SARNPP82979 210 aaKnown RBP15.3■□□□□ 0.04
LSM5-207ENST00000410044 SLC7A5Q01650 507 aa15.3■□□□□ 0.04
LSM5-207ENST00000410044 SPARCL1Q14515 664 aa15.3■□□□□ 0.04
LSM5-207ENST00000410044 MORF4L2Q15014 288 aa15.3■□□□□ 0.04
LSM5-207ENST00000410044 ZNF528Q3MIS6 628 aa15.3■□□□□ 0.04
LSM5-207ENST00000410044 TMEM52BQ4KMG9 183 aa15.3■□□□□ 0.04
LSM5-207ENST00000410044 SIRPB2Q5JXA9 342 aa15.3■□□□□ 0.04
LSM5-207ENST00000410044 CFAP58Q5T655 872 aa15.3■□□□□ 0.04
LSM5-207ENST00000410044 ANKRD22Q5VYY1 191 aa15.3■□□□□ 0.04
LSM5-207ENST00000410044 IZUMO3Q5VZ72 239 aa15.3■□□□□ 0.04
LSM5-207ENST00000410044 LRRC8BQ6P9F7 803 aa15.3■□□□□ 0.04
LSM5-207ENST00000410044 KIAA1324Q6UXG2 1013 aaKnown RBP15.3■□□□□ 0.04
LSM5-207ENST00000410044 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.3■□□□□ 0.04
LSM5-207ENST00000410044 PGBD3Q8N328 593 aa15.3■□□□□ 0.04
LSM5-207ENST00000410044 CBARPQ8N350 705 aaPredicted RBP15.3■□□□□ 0.04
LSM5-207ENST00000410044 PDCD6IPQ8WUM4 868 aaKnown RBP15.3■□□□□ 0.04
LSM5-207ENST00000410044 FAM126AQ9BYI3 521 aaPredicted RBP15.3■□□□□ 0.04
LSM5-207ENST00000410044 FRMD8Q9BZ67 464 aaPredicted RBP15.3■□□□□ 0.04
LSM5-207ENST00000410044 MAGEE1Q9HCI5 957 aa15.3■□□□□ 0.04
LSM5-207ENST00000410044 GRHL1Q9NZI5 618 aa15.3■□□□□ 0.04
LSM5-207ENST00000410044 BCCIPQ9P287 314 aaKnown RBP eCLIP15.3■□□□□ 0.04
LSM5-207ENST00000410044 SERGEFQ9UGK8 458 aa15.3■□□□□ 0.04
LSM5-207ENST00000410044 FADS3Q9Y5Q0 445 aa15.3■□□□□ 0.04
LSM5-207ENST00000410044 EML5Q05BV3 1969 aa15.29■□□□□ 0.04
LSM5-207ENST00000410044 AXIN1O15169 862 aa15.29■□□□□ 0.04
LSM5-207ENST00000410044 PLRG1O43660 514 aaKnown RBP15.29■□□□□ 0.04
LSM5-207ENST00000410044 HEXIM1O94992 359 aaKnown RBP15.29■□□□□ 0.04
LSM5-207ENST00000410044 GRIA1P42261 906 aa15.29■□□□□ 0.04
LSM5-207ENST00000410044 ABL2P42684 1182 aa15.29■□□□□ 0.04
LSM5-207ENST00000410044 CHRNA4P43681 627 aa15.29■□□□□ 0.04
LSM5-207ENST00000410044 TNNT3P45378 269 aaPredicted RBP15.29■□□□□ 0.04
LSM5-207ENST00000410044 LMAN1P49257 510 aa15.29■□□□□ 0.04
LSM5-207ENST00000410044 EPHB1P54762 984 aa15.29■□□□□ 0.04
LSM5-207ENST00000410044 CAV1Q03135 178 aa15.29■□□□□ 0.04
LSM5-207ENST00000410044 ELP6Q0PNE2 266 aa15.29■□□□□ 0.04
LSM5-207ENST00000410044 CDH17Q12864 832 aa15.29■□□□□ 0.04
LSM5-207ENST00000410044 OLIG2Q13516 323 aa15.29■□□□□ 0.04
LSM5-207ENST00000410044 CDKN3Q16667 212 aa15.29■□□□□ 0.04
LSM5-207ENST00000410044 MAP7D1Q3KQU3 841 aa15.29■□□□□ 0.04
LSM5-207ENST00000410044 POM121L1PQ3SYA9 428 aa15.29■□□□□ 0.04
LSM5-207ENST00000410044 TMEM31Q5JXX7 168 aa15.29■□□□□ 0.04
LSM5-207ENST00000410044 ARMC3Q5W041 872 aa15.29■□□□□ 0.04
LSM5-207ENST00000410044 NEK5Q6P3R8 708 aa15.29■□□□□ 0.04
LSM5-207ENST00000410044 ZNF534Q76KX8 674 aa15.29■□□□□ 0.04
LSM5-207ENST00000410044 KDELC2Q7Z4H8 507 aa15.29■□□□□ 0.04
LSM5-207ENST00000410044 WDR5BQ86VZ2 330 aa15.29■□□□□ 0.04
LSM5-207ENST00000410044 RAVER1Q8IY67 606 aaKnown RBP15.29■□□□□ 0.04
LSM5-207ENST00000410044 LPCAT1Q8NF37 534 aa15.29■□□□□ 0.04
LSM5-207ENST00000410044 RMDN1Q96DB5 314 aa15.29■□□□□ 0.04
LSM5-207ENST00000410044 FAM129AQ9BZQ8 928 aa15.29■□□□□ 0.04
LSM5-207ENST00000410044 SGK2Q9HBY8 427 aa15.29■□□□□ 0.04
LSM5-207ENST00000410044 PCDH12Q9NPG4 1184 aa15.29■□□□□ 0.04
LSM5-207ENST00000410044 WSB2Q9NYS7 404 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms