RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 SLC4A5Q9BY07 1137 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 POPDC2Q9HBU9 364 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 ACP6Q9NPH0 428 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 COX16Q9P0S2 106 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 SLC25A13Q9UJS0 675 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 HECTD1Q9ULT8 2610 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 TCAF2A6NFQ2 919 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 CAPN8A6NHC0 703 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 HMGB1P1B2RPK0 211 aaPredicted RBP12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 DAPK3O43293 454 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 SNAP91O60641 907 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 SRCP12931 536 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 CHRNA3P32297 505 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 HSD17B3P37058 310 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 DRG2P55039 364 aaKnown RBP12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 UCNP55089 124 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 VAC14Q08AM6 782 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 FGL2Q14314 439 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 ISXQ2M1V0 245 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 C3orf38Q5JPI3 329 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 SEL1L2Q5TEA6 688 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 DUPD1Q68J44 220 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 ABI3BPQ7Z7G0 1075 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 HORMAD1Q86X24 394 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 LSMEM2Q8N112 164 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 CHST14Q8NCH0 376 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 IFI44Q8TCB0 444 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 ATXN7L3BQ96GX2 97 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 NUP85Q9BW27 656 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 NLGN3Q9NZ94 848 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 KLF15Q9UIH9 416 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 VANGL2Q9ULK5 521 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 PCDHA3Q9Y5H8 950 aa12.91□□□□□ -0.34
CHRNA1-205ENST00000409542 NAV2Q8IVL1 2488 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 POM121BA6NF01 834 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 TMEM110-MUSTN1A8MSY1 372 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 SCAMP1O15126 338 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 ALOX15BO15296 676 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 RAD51BO15315 384 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 SMAD6O43541 496 aaKnown RBP12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 CNTN5O94779 1100 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 GP1BAP07359 652 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 HNRNPA2B1P22626 353 aaKnown RBP12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 DR1Q01658 176 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 AUHQ13825 339 aaKnown RBP12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 MESDQ14696 234 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 UAP1Q16222 522 aaPredicted RBP12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 CYP1B1Q16678 543 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 TPRG1LQ5T0D9 272 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 PPP1R2P3Q6NXS1 205 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 GUSBP11Q6P575 273 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 CRTC1Q6UUV9 634 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 TRIM72Q6ZMU5 477 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 Q6ZSR6 202 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 TMEM110Q86TL2 294 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 DEFB106AQ8N104 65 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 OR2A12Q8NGT7 310 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 MAPK15Q8TD08 544 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 KRT35Q92764 455 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 ATP6V1G3Q96LB4 118 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 RPRD1AQ96P16 312 aaPredicted RBP12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 ERP44Q9BS26 406 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 CAPS2Q9BXY5 557 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 DPH1Q9BZG8 443 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 CLMPQ9H6B4 373 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 DNAJC28Q9NX36 388 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 PCYOX1Q9UHG3 505 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 PLAAQ9Y263 795 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 ENTPD2Q9Y5L3 495 aa12.9□□□□□ -0.34
CHRNA1-205ENST00000409542 BOD1L1Q8NFC6 3051 aa12.9□□□□□ -0.35
CHRNA1-205ENST00000409542 COL12A1Q99715 3063 aa12.89□□□□□ -0.35
CHRNA1-205ENST00000409542 RP1P56715 2156 aa12.89□□□□□ -0.35
CHRNA1-205ENST00000409542 KPNA3O00505 521 aaPredicted RBP12.89□□□□□ -0.35
CHRNA1-205ENST00000409542 UNGP13051 313 aaPredicted RBP12.89□□□□□ -0.35
CHRNA1-205ENST00000409542 KRT5P13647 590 aa12.89□□□□□ -0.35
CHRNA1-205ENST00000409542 RRM1P23921 792 aa12.89□□□□□ -0.35
CHRNA1-205ENST00000409542 AKT2P31751 481 aa12.89□□□□□ -0.35
CHRNA1-205ENST00000409542 PTGIRP43119 386 aa12.89□□□□□ -0.35
CHRNA1-205ENST00000409542 ACADSBP45954 432 aa12.89□□□□□ -0.35
CHRNA1-205ENST00000409542 YWHAZP63104 245 aaKnown RBP12.89□□□□□ -0.35
CHRNA1-205ENST00000409542 C1QBPQ07021 282 aaKnown RBP12.89□□□□□ -0.35
CHRNA1-205ENST00000409542 FZD2Q14332 565 aa12.89□□□□□ -0.35
CHRNA1-205ENST00000409542 CDKN3Q16667 212 aa12.89□□□□□ -0.35
CHRNA1-205ENST00000409542 TMEM259Q4ZIN3 620 aa12.89□□□□□ -0.35
CHRNA1-205ENST00000409542 RABGAP1LQ5R372 815 aa12.89□□□□□ -0.35
CHRNA1-205ENST00000409542 TMC3Q7Z5M5 1100 aa12.89□□□□□ -0.35
CHRNA1-205ENST00000409542 JAMLQ86YT9 394 aa12.89□□□□□ -0.35
CHRNA1-205ENST00000409542 WDTC1Q8N5D0 677 aa12.89□□□□□ -0.35
CHRNA1-205ENST00000409542 SLC46A1Q96NT5 459 aa12.89□□□□□ -0.35
CHRNA1-205ENST00000409542 FAM129AQ9BZQ8 928 aa12.89□□□□□ -0.35
CHRNA1-205ENST00000409542 ABCG4Q9H172 646 aa12.89□□□□□ -0.35
CHRNA1-205ENST00000409542 TMBIM4Q9HC24 238 aa12.89□□□□□ -0.35
CHRNA1-205ENST00000409542 ANLNQ9NQW6 1124 aa12.89□□□□□ -0.35
CHRNA1-205ENST00000409542 THSD1Q9NS62 852 aa12.89□□□□□ -0.35
CHRNA1-205ENST00000409542 GPR27Q9NS67 375 aa12.89□□□□□ -0.35
CHRNA1-205ENST00000409542 CNOT8Q9UFF9 292 aaKnown RBP12.89□□□□□ -0.35
CHRNA1-205ENST00000409542 VPS28Q9UK41 221 aa12.89□□□□□ -0.35
CHRNA1-205ENST00000409542 CNTN6Q9UQ52 1028 aa12.89□□□□□ -0.35
CHRNA1-205ENST00000409542 SNX10Q9Y5X0 201 aa12.89□□□□□ -0.35
CHRNA1-205ENST00000409542 HS3ST4Q9Y661 456 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms