RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 PTPRCAPQ14761 206 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 FSCBQ5H9T9 825 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 LINGO4Q6UY18 593 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 TMC7Q7Z402 723 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 TTC7BQ86TV6 843 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 LDB1Q86U70 411 aaPredicted RBP20.82■□□□□ 0.92
USP39-203ENST00000409470 PARP9Q8IXQ6 854 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 LMNTD2Q8IXW0 634 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 FSTL5Q8N475 847 aaPredicted RBP20.82■□□□□ 0.92
USP39-203ENST00000409470 MAB21L3Q8N8X9 362 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 KLHL23Q8NBE8 558 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 OR6Y1Q8NGX8 325 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 INPP5DQ92835 1189 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 PEX13Q92968 403 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 NXNL1Q96CM4 212 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 RAB3IPQ96QF0 476 aaPredicted RBP20.82■□□□□ 0.92
USP39-203ENST00000409470 NMUR2Q9GZQ4 415 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 SUDS3Q9H7L9 328 aaPredicted RBP20.82■□□□□ 0.92
USP39-203ENST00000409470 PNPOQ9NVS9 261 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 OXSMQ9NWU1 459 aa20.82■□□□□ 0.92
USP39-203ENST00000409470 LSM7Q9UK45 103 aaKnown RBP20.82■□□□□ 0.92
USP39-203ENST00000409470 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.81■□□□□ 0.92
USP39-203ENST00000409470 KLHL2O95198 593 aa20.81■□□□□ 0.92
USP39-203ENST00000409470 CR2P20023 1033 aa20.81■□□□□ 0.92
USP39-203ENST00000409470 MZF1P28698 734 aaPredicted RBP20.81■□□□□ 0.92
USP39-203ENST00000409470 ARRB2P32121 409 aa20.81■□□□□ 0.92
USP39-203ENST00000409470 TSNAXIP1Q2TAA8 658 aa20.81■□□□□ 0.92
USP39-203ENST00000409470 NAPRTQ6XQN6 538 aa20.81■□□□□ 0.92
USP39-203ENST00000409470 GALNT7Q86SF2 657 aa20.81■□□□□ 0.92
USP39-203ENST00000409470 HS6ST3Q8IZP7 471 aa20.81■□□□□ 0.92
USP39-203ENST00000409470 SPATA6LQ8N4H0 392 aa20.81■□□□□ 0.92
USP39-203ENST00000409470 PNPLA1Q8N8W4 532 aa20.81■□□□□ 0.92
USP39-203ENST00000409470 BHMTQ93088 406 aa20.81■□□□□ 0.92
USP39-203ENST00000409470 NSMCE3Q96MG7 304 aa20.81■□□□□ 0.92
USP39-203ENST00000409470 ARL8BQ9NVJ2 186 aa20.81■□□□□ 0.92
USP39-203ENST00000409470 MARCH4Q9P2E8 410 aaPredicted RBP20.81■□□□□ 0.92
USP39-203ENST00000409470 VPS28Q9UK41 221 aa20.81■□□□□ 0.92
USP39-203ENST00000409470 ARIH1Q9Y4X5 557 aaPredicted RBP20.81■□□□□ 0.92
USP39-203ENST00000409470 TMEM114B3SHH9 223 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 GREM1O60565 184 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 HNRNPCL1O60812 293 aaKnown RBP20.8■□□□□ 0.92
USP39-203ENST00000409470 RPP40O75818 363 aaKnown RBP20.8■□□□□ 0.92
USP39-203ENST00000409470 TMCC1O94876 653 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 LUC7L3O95232 432 aaKnown RBP20.8■□□□□ 0.92
USP39-203ENST00000409470 GLP2RO95838 553 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 GOT2P00505 430 aaKnown RBP20.8■□□□□ 0.92
USP39-203ENST00000409470 ACVR1Q04771 509 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 CDH18Q13634 790 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 Q6ZNB5 142 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 ATG14Q6ZNE5 492 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 CCDC149Q6ZUS6 474 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 GAREM2Q75VX8 874 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 OR13C4Q8NGS5 318 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 TTC8Q8TAM2 541 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 STYXQ8WUJ0 223 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 TSPAN17Q96FV3 270 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 NSL1Q96IY1 281 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 NUDCD1Q96RS6 583 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 ARMCX1Q9P291 453 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 XPR1Q9UBH6 696 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 PTPRSQ13332 1948 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 MGRN1O60291 552 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 CCDC22O60826 627 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 CSPG5O95196 566 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 CRTAMO95727 393 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 FGBP02675 491 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 ADH1AP07327 375 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 C8AP07357 584 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 KPNA2P52292 529 aaKnown RBP20.8■□□□□ 0.92
USP39-203ENST00000409470 DLG1Q12959 904 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 LIPMQ5VYY2 423 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 ELMOD1Q8N336 334 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 TMEM151AQ8N4L1 468 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 SLC7A6OSQ96CW6 309 aaPredicted RBP20.8■□□□□ 0.92
USP39-203ENST00000409470 OLFM1Q99784 485 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 EBF4Q9BQW3 602 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 FEM1AQ9BSK4 669 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 TDRD1Q9BXT4 1180 aaKnown RBP20.8■□□□□ 0.92
USP39-203ENST00000409470 UNKQ9C0B0 810 aaKnown RBP20.8■□□□□ 0.92
USP39-203ENST00000409470 FAM96AQ9H5X1 160 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 BPTFQ12830 3046 aa20.8■□□□□ 0.92
USP39-203ENST00000409470 CCDC162PA2VCL2 907 aa20.79■□□□□ 0.92
USP39-203ENST00000409470 S1PR4O95977 384 aa20.79■□□□□ 0.92
USP39-203ENST00000409470 ATP5BP06576 529 aaKnown RBP20.79■□□□□ 0.92
USP39-203ENST00000409470 SBK3P0C264 359 aa20.79■□□□□ 0.92
USP39-203ENST00000409470 KRT72Q14CN4 511 aa20.79■□□□□ 0.92
USP39-203ENST00000409470 HECTD2Q5U5R9 776 aa20.79■□□□□ 0.92
USP39-203ENST00000409470 MRNIPQ6NTE8 343 aa20.79■□□□□ 0.92
USP39-203ENST00000409470 GPR78Q96P69 363 aa20.79■□□□□ 0.92
USP39-203ENST00000409470 GATA5Q9BWX5 397 aaPredicted RBP20.79■□□□□ 0.92
USP39-203ENST00000409470 STN1Q9H668 368 aaKnown RBP20.79■□□□□ 0.92
USP39-203ENST00000409470 LNPEPQ9UIQ6 1025 aa20.79■□□□□ 0.92
USP39-203ENST00000409470 SH3BP1Q9Y3L3 701 aa20.79■□□□□ 0.92
USP39-203ENST00000409470 PCDHGC4Q9Y5F7 938 aa20.79■□□□□ 0.92
USP39-203ENST00000409470 RAI2Q9Y5P3 530 aa20.79■□□□□ 0.92
USP39-203ENST00000409470 OBSL1O75147 1896 aa20.79■□□□□ 0.92
USP39-203ENST00000409470 CD3EAPO15446 510 aaKnown RBP20.78■□□□□ 0.92
USP39-203ENST00000409470 CSKP41240 450 aa20.78■□□□□ 0.92
USP39-203ENST00000409470 PRKAA2P54646 552 aa20.78■□□□□ 0.92
USP39-203ENST00000409470 HTRA4P83105 476 aaPredicted RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms