RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 STX4Q12846 297 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 BIKQ13323 160 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 PTPRNQ16849 979 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 ANO7Q6IWH7 933 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 CCNI2Q6ZMN8 369 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 ZNF852Q6ZMS4 543 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 LPCAT2Q7L5N7 544 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 MMAAQ8IVH4 418 aaKnown RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 ADGRG2Q8IZP9 1017 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 CYGBQ8WWM9 190 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 HMCESQ96FZ2 354 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 EBNA1BP2Q99848 306 aaKnown RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 ALG9Q9H6U8 611 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 WDR26Q9H7D7 661 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 C10orf88Q9H8K7 445 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 GKN1Q9NS71 199 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 PHTF1Q9UMS5 762 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 ZNF232Q9UNY5 417 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 SLC12A4Q9UP95 1085 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 MYOM1P52179 1685 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 C16orf96A6NNT2 1141 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 FAM220BPB1ANY3 271 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 H0Y3Z8 333 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 H3BNH8 94 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 SLC28A1O00337 649 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 RPP40O75818 363 aaKnown RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 WDR47O94967 919 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 PIM1P11309 404 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 PSMA4P25789 261 aaKnown RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 CSTF2P33240 577 aaKnown RBP eCLIP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 MASP1P48740 699 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 RPL6Q02878 288 aaKnown RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 ZBTB17Q13105 803 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 AUHQ13825 339 aaKnown RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 ATP13A5Q4VNC0 1218 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 LDLRAP1Q5SW96 308 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 MORN1Q5T089 497 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 FNBP1LQ5T0N5 605 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 CHST15Q7LFX5 561 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 SH2D3CQ8N5H7 860 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 HCAR2Q8TDS4 363 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 C7orf43Q8WVR3 580 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 KCTD14Q9BQ13 255 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 ETNK1Q9HBU6 452 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 ALKBH4Q9NXW9 302 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 VTI1BQ9UEU0 232 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 CYP8B1Q9UNU6 501 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 PHF24Q9UPV7 400 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 LRRC37A3O60309 1634 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 PHRF1Q9P1Y6 1649 aaKnown RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 LEFTY2O00292 366 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 THRAP10827 490 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 HAPLN1P10915 354 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 IGFALSP35858 605 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 IFNGR2P38484 337 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 NUDT2P50583 147 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 PRKAG1P54619 331 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 FMO1Q01740 532 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 CSTF3Q12996 717 aaKnown RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 MMRN1Q13201 1228 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 ARSHQ5FYA8 562 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 UBXN11Q5T124 520 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 TPRG1Q6ZUI0 275 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 C16orf62Q7Z3J2 963 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 Q8N9G6 341 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 CYB5D2Q8WUJ1 264 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 JSRP1Q96MG2 331 aaPredicted RBP5.04□□□□□ -1.6
SCN3A-203ENST00000409101 GSDMCQ9BYG8 508 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 RHOBTB2Q9BYZ6 727 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 ABCG8Q9H221 673 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 EBF3Q9H4W6 596 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 SUSD2Q9UGT4 822 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 TLR6Q9Y2C9 796 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 WNT6Q9Y6F9 365 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 AK5Q9Y6K8 562 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 C4BP0C0L5 1744 aa5.04□□□□□ -1.6
SCN3A-203ENST00000409101 E9PBE3 544 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 CLDN4O14493 209 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 INSIG1O15503 277 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 JMJD7P0C870 316 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 ZNF865P0CJ78 1059 aaPredicted RBP5.03□□□□□ -1.6
SCN3A-203ENST00000409101 LMO2P25791 158 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 OXTRP30559 389 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 HOXC12P31275 282 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 ADRA1BP35368 520 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 GPD2P43304 727 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 RAD23BP54727 409 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 VSNL1P62760 191 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 GPAT3Q53EU6 434 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 ARSIQ5FYB1 569 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 TXNDC11Q6PKC3 985 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 TCAIMQ8N3R3 496 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 BRSK1Q8TDC3 778 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 PROX1Q92786 737 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 HLA-CQ95604 372 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 RPL10LQ96L21 214 aaKnown RBP5.03□□□□□ -1.6
SCN3A-203ENST00000409101 PRDM12Q9H4Q4 367 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 GLOD4Q9HC38 313 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 ADPRHL2Q9NX46 363 aa5.03□□□□□ -1.6
SCN3A-203ENST00000409101 FBXL12Q9NXK8 326 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms