RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 PGK1P00558 417 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 SERPINA3P01011 423 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 AKR1A1P14550 325 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 ATP12AP54707 1039 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 YBEYP58557 167 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-203ENST00000409050 TUBA3CQ13748 450 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 PRKD1Q15139 912 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-203ENST00000409050 ALFQ53S48 1182 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 ESRP1Q6NXG1 681 aaKnown RBP6.13□□□□□ -1.43
SCN1A-203ENST00000409050 RASSF6Q6ZTQ3 369 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 TRMT11Q7Z4G4 463 aaKnown RBP6.13□□□□□ -1.43
SCN1A-203ENST00000409050 TRABD2AQ86V40 505 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 PLCZ1Q86YW0 608 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 SLC22A17Q8WUG5 538 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 KAT5Q92993 513 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 ACE2Q9BYF1 805 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-203ENST00000409050 PCBD2Q9H0N5 130 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 KCNMB3Q9NPA1 279 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 EURLQ9NYK6 297 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 GTF2A1LQ9UNN4 478 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 ZNF451Q9Y4E5 1061 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 SNCAIPQ9Y6H5 919 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 BCORL1Q5H9F3 1711 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 H3BRB1 525 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 TPP1O14773 563 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 PER2O15055 1255 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 TNFRSF21O75509 655 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 TM7SF2O76062 418 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 LPOP22079 712 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-203ENST00000409050 ATP5C1P36542 298 aaKnown RBP6.13□□□□□ -1.43
SCN1A-203ENST00000409050 THPOP40225 353 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 CBX5P45973 191 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 CASP5P51878 434 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 PUDPQ08623 228 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 BMPR2Q13873 1038 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 GRIK4Q16099 956 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 SETMARQ53H47 684 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-203ENST00000409050 XKRXQ6PP77 449 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 IZUMO1Q8IYV9 350 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 DEFB106AQ8N104 65 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 DNAJC1Q96KC8 554 aaKnown RBP6.13□□□□□ -1.43
SCN1A-203ENST00000409050 SCGB3A2Q96PL1 93 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 FNDC11Q9BVV2 318 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 LMAN2LQ9H0V9 348 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 TUT1Q9H6E5 874 aaKnown RBP6.13□□□□□ -1.43
SCN1A-203ENST00000409050 RABL2AQ9UBK7 228 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-203ENST00000409050 GULP1Q9UBP9 304 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 DNMT3LQ9UJW3 386 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 MKLN1Q9UL63 735 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 RABL2BQ9UNT1 228 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 NRCAMQ92823 1304 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 STX16-NPEPL1H3BU86 382 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 CBX4O00257 560 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 STX16O14662 325 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 PMM2O15305 246 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 DNAJB5O75953 348 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 CHRNGP07510 517 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 HGFP14210 728 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 PPM1AP35813 382 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 PLK1P53350 603 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 MTTPP55157 894 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 MAMLD1Q13495 774 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 POU6F1Q14863 301 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 CPNE9Q8IYJ1 553 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 NKD2Q969F2 451 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-203ENST00000409050 ZNF347Q96SE7 839 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 NFKBIZQ9BYH8 718 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 MKS1Q9NXB0 559 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 CCDC167Q9P0B6 97 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 MKL2Q9ULH7 1088 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 COQ6Q9Y2Z9 468 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 MEMO1Q9Y316 297 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 AP4B1Q9Y6B7 739 aa6.13□□□□□ -1.43
SCN1A-203ENST00000409050 hCG_1818297A0A087WSY0 165 aa6.12□□□□□ -1.43
SCN1A-203ENST00000409050 KPNA3O00505 521 aaPredicted RBP6.12□□□□□ -1.43
SCN1A-203ENST00000409050 SSNA1O43805 119 aa6.12□□□□□ -1.43
SCN1A-203ENST00000409050 NPHS1O60500 1241 aa6.12□□□□□ -1.43
SCN1A-203ENST00000409050 SLITRK3O94933 977 aa6.12□□□□□ -1.43
SCN1A-203ENST00000409050 BPGMP07738 259 aa6.12□□□□□ -1.43
SCN1A-203ENST00000409050 ARP10275 920 aa6.12□□□□□ -1.43
SCN1A-203ENST00000409050 HSD17B2P37059 387 aa6.12□□□□□ -1.43
SCN1A-203ENST00000409050 ABRQ12979 859 aa6.12□□□□□ -1.43
SCN1A-203ENST00000409050 SKIV2LQ15477 1246 aaKnown RBP6.12□□□□□ -1.43
SCN1A-203ENST00000409050 PARP15Q460N3 678 aa6.12□□□□□ -1.43
SCN1A-203ENST00000409050 EIF5AL1Q6IS14 154 aaKnown RBP6.12□□□□□ -1.43
SCN1A-203ENST00000409050 WDR59Q6PJI9 974 aa6.12□□□□□ -1.43
SCN1A-203ENST00000409050 CHSY3Q70JA7 882 aa6.12□□□□□ -1.43
SCN1A-203ENST00000409050 FLCNQ8NFG4 579 aa6.12□□□□□ -1.43
SCN1A-203ENST00000409050 AGAP11Q8TF27 550 aa6.12□□□□□ -1.43
SCN1A-203ENST00000409050 RAB2BQ8WUD1 216 aa6.12□□□□□ -1.43
SCN1A-203ENST00000409050 PLEKHG4BQ96PX9 1271 aa6.12□□□□□ -1.43
SCN1A-203ENST00000409050 TBCDQ9BTW9 1192 aa6.12□□□□□ -1.43
SCN1A-203ENST00000409050 SLC27A6Q9Y2P4 619 aa6.12□□□□□ -1.43
SCN1A-203ENST00000409050 PCDHGB7Q9Y5F8 929 aa6.12□□□□□ -1.43
SCN1A-203ENST00000409050 NFAT5O94916 1531 aa6.12□□□□□ -1.43
SCN1A-203ENST00000409050 ATRNO75882 1429 aa6.12□□□□□ -1.43
SCN1A-203ENST00000409050 A0A0B4J269 797 aa6.12□□□□□ -1.43
SCN1A-203ENST00000409050 MAGEB3O15480 346 aa6.12□□□□□ -1.43
SCN1A-203ENST00000409050 KERAO60938 352 aa6.12□□□□□ -1.43
SCN1A-203ENST00000409050 SLC22A3O75751 556 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms