RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 ERCC2P18074 760 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 HIRAP54198 1017 aaPredicted RBP13.42□□□□□ -0.26
SNED1-205ENST00000405547 RNF220Q5VTB9 566 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 TRMT11Q7Z4G4 463 aaKnown RBP13.42□□□□□ -0.26
SNED1-205ENST00000405547 ZNF554Q86TJ5 538 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 ZFPM1Q8IX07 1006 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 PTCD2Q8WV60 388 aaKnown RBP13.42□□□□□ -0.26
SNED1-205ENST00000405547 ATL1Q8WXF7 558 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 NPAS2Q99743 824 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 VPS51Q9UID3 782 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 URB1O60287 2271 aaKnown RBP13.42□□□□□ -0.26
SNED1-205ENST00000405547 GUCY1B2O75343 617 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 TRMUO75648 421 aaKnown RBP13.42□□□□□ -0.26
SNED1-205ENST00000405547 PTPN3P26045 913 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 RFX3P48380 749 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 PSMD5Q16401 504 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 MACC1Q6ZN28 852 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 OR2T34Q8NGX1 318 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 OR2T3Q8NH03 318 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 NAT14Q8WUY8 206 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 ZNF232Q9UNY5 417 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 CAPN8A6NHC0 703 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 LYNP07948 512 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 SPATA19Q7Z5L4 167 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 PGBD3Q8N328 593 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 FAM124BQ9H5Z6 455 aaPredicted RBP13.42□□□□□ -0.26
SNED1-205ENST00000405547 EGFL7Q9UHF1 273 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 MTTPP55157 894 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 ENPEPQ07075 957 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 LPCAT4Q643R3 524 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 FAM117BQ6P1L5 589 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 SH3BP5LQ7L8J4 393 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 PLPPR4Q7Z2D5 763 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 PIGZQ86VD9 579 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 P2RY11Q96G91 374 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 PCDHB18PQ96TA0 734 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 PNPLA8Q9NP80 782 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 GNEQ9Y223 722 aaKnown RBP13.42□□□□□ -0.26
SNED1-205ENST00000405547 DISP2A7MBM2 1401 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 C2P06681 752 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 PCDH18Q9HCL0 1135 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 R3HDM2Q9Y2K5 976 aaKnown RBP13.42□□□□□ -0.26
SNED1-205ENST00000405547 SAMHD1Q9Y3Z3 626 aaKnown RBP13.42□□□□□ -0.26
SNED1-205ENST00000405547 SAGE2PA6NJ88 616 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 SMIM22K7EJ46 135 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 TSPAN3O60637 253 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 CYP2A6P11509 494 aaPredicted RBP13.42□□□□□ -0.26
SNED1-205ENST00000405547 ITGB5P18084 799 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 STAT5AP42229 794 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 TUFMP49411 452 aaKnown RBP13.42□□□□□ -0.26
SNED1-205ENST00000405547 EFCAB3Q8N7B9 438 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 KLHL1Q9NR64 748 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 FADS3Q9Y5Q0 445 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 IDH3BO43837 385 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 B4GALT4O60513 344 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 IL12AP29459 219 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 SERPINA4P29622 427 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 CTBP1Q13363 440 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 MTSS1LQ765P7 747 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 C2orf49Q9BVC5 232 aaPredicted RBP13.42□□□□□ -0.26
SNED1-205ENST00000405547 CAPN10Q9HC96 672 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 RPTORQ8N122 1335 aa13.42□□□□□ -0.26
SNED1-205ENST00000405547 A0A0J9YYE9 177 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 DNAJA2O60884 412 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 FAM171A1Q5VUB5 890 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 WSCD1Q658N2 575 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 C12orf29Q8N999 325 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 ITCHQ96J02 903 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 SPATA5L1Q9BVQ7 753 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 ZFP14Q9HCL3 533 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 VWA7Q9Y334 891 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 PIK3C2AO00443 1686 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 ATP6AP2A0A1C7CYW4 349 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 SPATA31C2B4DYI2 1134 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 ATP6AP2O75787 350 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 HPS6Q86YV9 775 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 RTL3Q8N8U3 475 aaKnown RBP13.41□□□□□ -0.26
SNED1-205ENST00000405547 CDT1Q9H211 546 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 UBXN8O00124 270 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 LYPLA1O75608 230 aaPredicted RBP13.41□□□□□ -0.26
SNED1-205ENST00000405547 UMPSP11172 480 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 SLC26A3P40879 764 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 MAPK8P45983 427 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 CXCL9Q07325 125 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 PLD1Q13393 1074 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 IQSEC1Q6DN90 963 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 OR52K2Q8NGK3 314 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 NKX2-3Q8TAU0 364 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 MLPHQ9BV36 600 aaPredicted RBP13.41□□□□□ -0.26
SNED1-205ENST00000405547 UXTQ9UBK9 157 aaPredicted RBP13.41□□□□□ -0.26
SNED1-205ENST00000405547 LRIG2O94898 1065 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 CRATP43155 626 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 ALFQ53S48 1182 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 MTX3Q5HYI7 312 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 FNBP1LQ5T0N5 605 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 NELL1Q92832 810 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 MTFMTQ96DP5 389 aaKnown RBP13.41□□□□□ -0.26
SNED1-205ENST00000405547 GTF2A1LQ9UNN4 478 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 MST1RQ04912 1400 aa13.41□□□□□ -0.26
SNED1-205ENST00000405547 TCEA3O75764 348 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms