RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 A0A0U1RQF3 1178 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 RGSL1A5PLK6 1076 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 MAGEA13PA6NCF6 341 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 A8MT66 165 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 TMEM114B3SHH9 223 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 F8W8V4 182 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 FKBP6O75344 327 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 MT-ND1P03886 318 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 DPP6P42658 865 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 ALDH1A3P47895 512 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 KCNC1P48547 511 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 CCNG1P51959 295 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 C1QTNF8P60827 252 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 RPS24P62847 133 aaKnown RBP4.38□□□□□ -1.71
SMC6-203ENST00000402989 MS4A2Q01362 244 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 CAPRIN1Q14444 709 aaKnown RBP4.38□□□□□ -1.71
SMC6-203ENST00000402989 IHHQ14623 411 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 PLA2G4EQ3MJ16 856 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 FUT11Q495W5 492 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 MS4A13Q5J8X5 152 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 SIRPB2Q5JXA9 342 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 VARS2Q5ST30 1063 aaKnown RBP4.38□□□□□ -1.71
SMC6-203ENST00000402989 FAM171BQ6P995 826 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 PAOXQ6QHF9 649 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 C17orf99Q6UX52 265 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 LIMS2Q7Z4I7 341 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 CLEC14AQ86T13 490 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 ZNF598Q86UK7 904 aaKnown RBP4.38□□□□□ -1.71
SMC6-203ENST00000402989 CUZD1Q86UP6 607 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 NUP93Q8N1F7 819 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 PTGR2Q8N8N7 351 aaPredicted RBP4.38□□□□□ -1.71
SMC6-203ENST00000402989 ACTRT2Q8TDY3 377 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 TRPC4APQ8TEL6 797 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 ATP6V1E2Q96A05 226 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 NMD3Q96D46 503 aaKnown RBP4.38□□□□□ -1.71
SMC6-203ENST00000402989 SERPINB11Q96P15 392 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 UBE2OQ9C0C9 1292 aaKnown RBP4.38□□□□□ -1.71
SMC6-203ENST00000402989 ABCG8Q9H221 673 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 NOL6Q9H6R4 1146 aaKnown RBP4.38□□□□□ -1.71
SMC6-203ENST00000402989 ENTPD7Q9NQZ7 604 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 RRN3Q9NYV6 651 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.38□□□□□ -1.71
SMC6-203ENST00000402989 EGFL7Q9UHF1 273 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 PCDHGB4Q9UN71 923 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 TIMM22Q9Y584 194 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 PCDHGB5Q9Y5G0 923 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 MYLKQ15746 1914 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 HEATR9A2RTY3 570 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 ZNF839A8K0R7 811 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 SDHDO14521 159 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 UBDO15205 165 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 RHOBTB1O94844 696 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 OR6B1O95007 311 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 APOA4P06727 396 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 LTA4HP09960 611 aaKnown RBP4.38□□□□□ -1.71
SMC6-203ENST00000402989 LINC00032P0C843 101 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 CHRM3P20309 590 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 ATP5F1P24539 256 aaPredicted RBP4.38□□□□□ -1.71
SMC6-203ENST00000402989 HADHAP40939 763 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 ARCN1P48444 511 aaKnown RBP4.38□□□□□ -1.71
SMC6-203ENST00000402989 HCAR3P49019 387 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 CDKN1CP49918 316 aaPredicted RBP4.38□□□□□ -1.71
SMC6-203ENST00000402989 RENBPP51606 427 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 AIF1P55008 147 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 SULT2A1Q06520 285 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 CLLU1OSQ5K130 101 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 SPOUT1Q5T280 376 aaKnown RBP4.38□□□□□ -1.71
SMC6-203ENST00000402989 AGAP9Q5VTM2 703 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 TIGD7Q6NT04 549 aaPredicted RBP4.38□□□□□ -1.71
SMC6-203ENST00000402989 RGMBQ6NW40 437 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 C16orf89Q6UX73 402 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 CD300LGQ6UXG3 332 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 CYS1Q717R9 158 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 TAS2R42Q7RTR8 314 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 BNIPLQ7Z465 357 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 LPCAT1Q8NF37 534 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 SOCS4Q8WXH5 440 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 DCUN1D1Q96GG9 259 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 SERPINI1Q99574 410 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 RTKNQ9BST9 563 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 MRPL1Q9BYD6 325 aaKnown RBP4.38□□□□□ -1.71
SMC6-203ENST00000402989 GPR62Q9BZJ7 368 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 TRIM4Q9C037 500 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 ZYG11BQ9C0D3 744 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 CCDC68Q9H2F9 335 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 CRISPLD1Q9H336 500 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 SMOC2Q9H3U7 446 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 GPBP1L1Q9HC44 474 aaPredicted RBP4.38□□□□□ -1.71
SMC6-203ENST00000402989 CSNK1G1Q9HCP0 422 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 MID1IP1Q9NPA3 183 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 GKN1Q9NS71 199 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 TBC1D13Q9NVG8 400 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 RPL26L1Q9UNX3 145 aaKnown RBP4.38□□□□□ -1.71
SMC6-203ENST00000402989 ANKRD6Q9Y2G4 727 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 VWA7Q9Y334 891 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 PCDHB5Q9Y5E4 795 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 PCDHGC4Q9Y5F7 938 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 SNX13Q9Y5W8 968 aa4.38□□□□□ -1.71
SMC6-203ENST00000402989 TDRD15B5MCY1 1934 aaKnown RBP4.38□□□□□ -1.71
SMC6-203ENST00000402989 CCDC162PA2VCL2 907 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms