RNA–Protein interactions for RNA: ENST00000402554.7

NDEL1-203, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-203ENST00000402554 RFTN1Q14699 578 aaPredicted RBP13.2□□□□□ -0.3
NDEL1-203ENST00000402554 ZKSCAN8Q15776 578 aaPredicted RBP13.2□□□□□ -0.3
NDEL1-203ENST00000402554 ZNF77Q15935 545 aa13.2□□□□□ -0.3
NDEL1-203ENST00000402554 RNF219Q5W0B1 726 aaPredicted RBP13.2□□□□□ -0.3
NDEL1-203ENST00000402554 CXorf57Q6NSI4 855 aaKnown RBP13.2□□□□□ -0.3
NDEL1-203ENST00000402554 ZNF783Q6ZMS7 281 aa13.2□□□□□ -0.3
NDEL1-203ENST00000402554 NDUFAF2Q8N183 169 aa13.2□□□□□ -0.3
NDEL1-203ENST00000402554 CCDC197Q8NCU1 140 aa13.2□□□□□ -0.3
NDEL1-203ENST00000402554 ACMSDQ8TDX5 336 aa13.2□□□□□ -0.3
NDEL1-203ENST00000402554 SH3RF2Q8TEC5 729 aa13.2□□□□□ -0.3
NDEL1-203ENST00000402554 ZNF778Q96MU6 729 aa13.2□□□□□ -0.3
NDEL1-203ENST00000402554 FAM111AQ96PZ2 611 aa13.2□□□□□ -0.3
NDEL1-203ENST00000402554 AGAP2Q99490 1192 aa13.2□□□□□ -0.3
NDEL1-203ENST00000402554 RBBP8Q99708 897 aa13.2□□□□□ -0.3
NDEL1-203ENST00000402554 CINPQ9BW66 212 aaPredicted RBP13.2□□□□□ -0.3
NDEL1-203ENST00000402554 ACE2Q9BYF1 805 aaPredicted RBP13.2□□□□□ -0.3
NDEL1-203ENST00000402554 FOXQ1Q9C009 403 aa13.2□□□□□ -0.3
NDEL1-203ENST00000402554 MUC3BQ9H195 1237 aa13.2□□□□□ -0.3
NDEL1-203ENST00000402554 VPS11Q9H270 941 aa13.2□□□□□ -0.3
NDEL1-203ENST00000402554 C12orf65Q9H3J6 166 aaKnown RBP13.2□□□□□ -0.3
NDEL1-203ENST00000402554 IARS2Q9NSE4 1012 aaKnown RBP13.2□□□□□ -0.3
NDEL1-203ENST00000402554 PCMTD2Q9NV79 361 aa13.2□□□□□ -0.3
NDEL1-203ENST00000402554 NSMCE4AQ9NXX6 385 aa13.2□□□□□ -0.3
NDEL1-203ENST00000402554 WNT16Q9UBV4 365 aa13.2□□□□□ -0.3
NDEL1-203ENST00000402554 MIA3Q5JRA6 1907 aa13.2□□□□□ -0.3
NDEL1-203ENST00000402554 HEATR9A2RTY3 570 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 H0Y626 953 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 STK25O00506 426 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 MUSKO15146 869 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 DHRS4L1P0CG22 281 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 ARSAP15289 507 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 PFKLP17858 780 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 GLDCP23378 1020 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 WEE1P30291 646 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 ETV4P43268 484 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 CSE1LP55060 971 aaKnown RBP13.19□□□□□ -0.3
NDEL1-203ENST00000402554 SEPT6Q14141 434 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 IHHQ14623 411 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 MLF2Q15773 248 aaPredicted RBP13.19□□□□□ -0.3
NDEL1-203ENST00000402554 SLC44A4Q53GD3 710 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 ALG1LQ6GMV1 187 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 TPRG1Q6ZUI0 275 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 FAM217AQ8IXS0 508 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 CARNMT1Q8N4J0 409 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 FBXL6Q8N531 539 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 E2F7Q96AV8 911 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 TMA16Q96EY4 203 aaKnown RBP13.19□□□□□ -0.3
NDEL1-203ENST00000402554 CABS1Q96KC9 395 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 PSKH2Q96QS6 385 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 RANBP9Q96S59 729 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 SLC13A1Q9BZW2 595 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 TBC1D17Q9HA65 648 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 GTSE1Q9NYZ3 720 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 CFAP97Q9P2B7 532 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 ZNF510Q9Y2H8 683 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 PLLPQ9Y342 182 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 SH3BP1Q9Y3L3 701 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 WNT6Q9Y6F9 365 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 LOC285095A0A1B0GVY8 99 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 CBX4O00257 560 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 LEFTY2O00292 366 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 GFRA2O00451 464 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 TPP1O14773 563 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 PI15O43692 258 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 ALDOAP04075 364 aaKnown RBP13.19□□□□□ -0.3
NDEL1-203ENST00000402554 PAMP19021 973 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 CRHR1P34998 444 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 LIMK2P53671 638 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 ESRP1Q6NXG1 681 aaKnown RBP13.19□□□□□ -0.3
NDEL1-203ENST00000402554 CDHR3Q6ZTQ4 885 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 ANKS4BQ8N8V4 417 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 ZNF75CPQ92670 426 aaPredicted RBP13.19□□□□□ -0.3
NDEL1-203ENST00000402554 IFT43Q96FT9 208 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 FEM1CQ96JP0 617 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 MGME1Q9BQP7 344 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 OBP2AQ9NY56 170 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 ZMYM5Q9UJ78 669 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 ARHGAP26Q9UNA1 814 aa13.19□□□□□ -0.3
NDEL1-203ENST00000402554 WDFY4Q6ZS81 3184 aa13.18□□□□□ -0.3
NDEL1-203ENST00000402554 WDR91A4D1P6 747 aa13.18□□□□□ -0.3
NDEL1-203ENST00000402554 TIMM44O43615 452 aa13.18□□□□□ -0.3
NDEL1-203ENST00000402554 SNX3O60493 162 aa13.18□□□□□ -0.3
NDEL1-203ENST00000402554 LUC7L3O95232 432 aaKnown RBP13.18□□□□□ -0.3
NDEL1-203ENST00000402554 VAPBO95292 243 aa13.18□□□□□ -0.3
NDEL1-203ENST00000402554 SERPINF2P08697 491 aa13.18□□□□□ -0.3
NDEL1-203ENST00000402554 PFKPQ01813 784 aa13.18□□□□□ -0.3
NDEL1-203ENST00000402554 CDK18Q07002 472 aa13.18□□□□□ -0.3
NDEL1-203ENST00000402554 SLC14A2Q15849 920 aa13.18□□□□□ -0.3
NDEL1-203ENST00000402554 SIRPB2Q5JXA9 342 aa13.18□□□□□ -0.3
NDEL1-203ENST00000402554 KIAA0930Q6ICG6 404 aaPredicted RBP13.18□□□□□ -0.3
NDEL1-203ENST00000402554 FAM47EQ6ZV65 393 aa13.18□□□□□ -0.3
NDEL1-203ENST00000402554 HTR3DQ70Z44 454 aa13.18□□□□□ -0.3
NDEL1-203ENST00000402554 BMP8AQ7Z5Y6 402 aa13.18□□□□□ -0.3
NDEL1-203ENST00000402554 TMEM105Q8N8V8 129 aa13.18□□□□□ -0.3
NDEL1-203ENST00000402554 DNASE1L2Q92874 299 aa13.18□□□□□ -0.3
NDEL1-203ENST00000402554 IRF7Q92985 503 aa13.18□□□□□ -0.3
NDEL1-203ENST00000402554 GRAMD1AQ96CP6 724 aa13.18□□□□□ -0.3
NDEL1-203ENST00000402554 PITPNM3Q9BZ71 974 aa13.18□□□□□ -0.3
NDEL1-203ENST00000402554 EBF3Q9H4W6 596 aa13.18□□□□□ -0.3
NDEL1-203ENST00000402554 HPS4Q9NQG7 708 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms