RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 RAB44Q7Z6P3 723 aaPredicted RBP12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 HERC6Q8IVU3 1022 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 LSMEM2Q8N112 164 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 OR10T2Q8NGX3 314 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 GRIN3AQ8TCU5 1115 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 SMIM14Q96QK8 99 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 SEMA3CQ99985 751 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 C1orf50Q9BV19 199 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 FAM192AQ9GZU8 254 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 NMUR1Q9HB89 426 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 NSMCE4AQ9NXX6 385 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 CROTQ9UKG9 612 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 VWA7Q9Y334 891 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 SLC12A8A0AV02 714 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 E9PAM4 449 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 SDHDO14521 159 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 ATP5BP06576 529 aaKnown RBP12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 HAPLN1P10915 354 aaPredicted RBP12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 ITGB6P18564 788 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 GLDCP23378 1020 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 HUNKP57058 714 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 SPPL2CQ8IUH8 684 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 PGAM4Q8N0Y7 254 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 C2orf69Q8N8R5 385 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 EFHD1Q9BUP0 239 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 BPIFA1Q9NP55 256 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 MARCH4Q9P2E8 410 aaPredicted RBP12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 VTI1BQ9UEU0 232 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 ANKRD6Q9Y2G4 727 aa12.74□□□□□ -0.37
PPP4R1-202ENST00000400555 A8MT66 165 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 UBXN8O00124 270 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 INPP4BO15327 924 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 LTA4HP09960 611 aaKnown RBP12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 SCNN1BP51168 640 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 MRPS6P82932 125 aaKnown RBP12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 ADGRE1Q14246 886 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 SETD3Q86TU7 594 aaPredicted RBP12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 KDM1BQ8NB78 822 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 ZBTB26Q9HCK0 441 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 PADI3Q9ULW8 664 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 HEMK1Q9Y5R4 338 aaPredicted RBP12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 ARL5AQ9Y689 179 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 DOCK3Q8IZD9 2030 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 H3BSA7 217 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 H2AFYO75367 372 aaKnown RBP12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 IPO13O94829 963 aaKnown RBP12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 RHOBTB1O94844 696 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 SBK3P0C264 359 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 RAB27AP51159 221 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 OTUD3Q5T2D3 398 aaPredicted RBP12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 AGMOQ6ZNB7 445 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 PIWIL4Q7Z3Z4 852 aaKnown RBP12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 OR13C4Q8NGS5 318 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 GIPC2Q8TF65 315 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 KCTD13Q8WZ19 329 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 NTAN1Q96AB6 310 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 ZNF419Q96HQ0 510 aaPredicted RBP12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 NSUN5Q96P11 429 aaKnown RBP12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 ENTPD7Q9NQZ7 604 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 THEGQ9P2T0 379 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 PTPRFP10586 1907 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 NT5C1B-RDH14C9J2C7 533 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 HNRNPRO43390 633 aaKnown RBP12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 SNRPB2P08579 225 aaKnown RBP12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 NCK1P16333 377 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 OR1E1P30953 314 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 PBX3P40426 434 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 SULT2A1Q06520 285 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 ZNF423Q2M1K9 1284 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 ALFQ53S48 1182 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 SGO1Q5FBB7 561 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 TBCELQ5QJ74 424 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 GABPB2Q8TAK5 448 aaPredicted RBP12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 MIPOL1Q8TD10 442 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 SH3RF2Q8TEC5 729 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 SLC9A7Q96T83 725 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 SPC25Q9HBM1 224 aa12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 C6orf203Q9P0P8 240 aaPredicted RBP12.73□□□□□ -0.37
PPP4R1-202ENST00000400555 A8MX80 341 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 ZNF487B1APH4 448 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 H3BMM5 538 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 IRF1P10914 325 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 HSPA8P11142 646 aaKnown RBP12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 CA8P35219 290 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 HADHAP40939 763 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 TPD52P55327 224 aaPredicted RBP12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 TBX4P57082 545 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 RBBP7Q16576 425 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 REP15Q6BDI9 236 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 TAS2R42Q7RTR8 314 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 B4GALNT2Q8NHY0 566 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 FAM110BQ8TC76 370 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 VPS33AQ96AX1 596 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 LRCH3Q96II8 777 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 PPP1R10Q96QC0 940 aaKnown RBP12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 PTPN18Q99952 460 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 KIFC1Q9BW19 673 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 PRPF19Q9UMS4 504 aaKnown RBP12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 TCAF2A6NFQ2 919 aa12.72□□□□□ -0.37
PPP4R1-202ENST00000400555 SLCO1B7G3V0H7 640 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms