RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 CPSF6Q16630 551 aaKnown RBP eCLIP3.28□□□□□ -1.89
KNL1-202ENST00000399668 PREPLQ4J6C6 727 aaPredicted RBP3.28□□□□□ -1.89
KNL1-202ENST00000399668 PLPP4Q5VZY2 271 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 TRAF7Q6Q0C0 670 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 RINLQ6ZS11 566 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 GATAD2AQ86YP4 633 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 BBS7Q8IWZ6 715 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 KRT78Q8N1N4 520 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 C1orf127Q8N9H9 656 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 STAG3L4Q8TBR4 150 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 LENG9Q96B70 501 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 LINGO1Q96FE5 620 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 AHCYL2Q96HN2 611 aaKnown RBP3.28□□□□□ -1.89
KNL1-202ENST00000399668 GPR20Q99678 358 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 MRPL57Q9BQC6 102 aaKnown RBP3.28□□□□□ -1.89
KNL1-202ENST00000399668 FTHL17Q9BXU8 183 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 PRKD2Q9BZL6 878 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 PAIP1Q9H074 479 aaKnown RBP3.28□□□□□ -1.89
KNL1-202ENST00000399668 LHX5Q9H2C1 402 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 TRMT13Q9NUP7 481 aaKnown RBP3.28□□□□□ -1.89
KNL1-202ENST00000399668 SYBUQ9NX95 663 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 ARHGAP28Q9P2N2 729 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 ATP6V1HQ9UI12 483 aa3.28□□□□□ -1.89
KNL1-202ENST00000399668 PLCE1Q9P212 2302 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 MYBPHLA2RUH7 354 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 EME2A4GXA9 379 aaPredicted RBP3.27□□□□□ -1.89
KNL1-202ENST00000399668 PRR23D1E9PI22 279 aaPredicted RBP3.27□□□□□ -1.89
KNL1-202ENST00000399668 PSMD12O00232 456 aaPredicted RBP3.27□□□□□ -1.89
KNL1-202ENST00000399668 TLL1O43897 1013 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 BCL10O95999 233 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 AMHP03971 560 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 PRR23D2P0DMB1 279 aaPredicted RBP3.27□□□□□ -1.89
KNL1-202ENST00000399668 CTSEP14091 401 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 IGFBP4P22692 258 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 CTNNB1P35222 781 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 BRCC3P46736 316 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 HK2P52789 917 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 DGCR6Q14129 220 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 TAF5Q15542 800 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 BMT2Q1RMZ1 405 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 TRIM16LQ309B1 348 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 ANKS6Q68DC2 871 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 LINGO4Q6UY18 593 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 OTOP3Q7RTS5 596 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 ANKS1BQ7Z6G8 1248 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 AMIGO3Q86WK7 504 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 DHFR2Q86XF0 187 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 NLGN2Q8NFZ4 835 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 SNRNP27Q8WVK2 155 aaKnown RBP3.27□□□□□ -1.89
KNL1-202ENST00000399668 DEFB118Q96PH6 123 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 PANX3Q96QZ0 392 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 CAMKK2Q96RR4 588 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 RNPEPL1Q9HAU8 725 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 GMIPQ9P107 970 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 PADI3Q9ULW8 664 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.27□□□□□ -1.89
KNL1-202ENST00000399668 SPACA6W5XKT8 324 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 COL5A3P25940 1745 aaPredicted RBP3.27□□□□□ -1.89
KNL1-202ENST00000399668 ZNF541Q9H0D2 1346 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 ABCA3Q99758 1704 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 IQCF5A8MTL0 148 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 MAP3K13O43283 966 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 TNFAIP8O95379 198 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 NUDT14O95848 222 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 LDLRP01130 860 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 KRT8P05787 483 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 OR4Q2P0C623 313 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 CHRNB2P17787 502 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 PSMB9P28065 219 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 S100A3P33764 101 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 ELF3P78545 371 aaPredicted RBP3.27□□□□□ -1.89
KNL1-202ENST00000399668 TAF10Q12962 218 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 ZNF460Q14592 562 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 SLC10A6Q3KNW5 377 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 PCID2Q5JVF3 399 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 SAMD4BQ5PRF9 694 aaKnown RBP3.27□□□□□ -1.89
KNL1-202ENST00000399668 TMEM26Q6ZUK4 368 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 ZC3H7AQ8IWR0 971 aaKnown RBP3.27□□□□□ -1.89
KNL1-202ENST00000399668 STK40Q8N2I9 435 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 LRRC52Q8N7C0 313 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 PLD5Q8N7P1 536 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 CLEC4CQ8WTT0 213 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 KCTD4Q8WVF5 259 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 ART4Q93070 314 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 PGM2Q96G03 612 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 CLPTM1LQ96KA5 538 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 CSPG4P5Q96PW8 444 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 WRAP53Q9BUR4 548 aaKnown RBP3.27□□□□□ -1.89
KNL1-202ENST00000399668 C1QTNF7Q9BXJ2 289 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 PCDH18Q9HCL0 1135 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 ASAH2Q9NR71 780 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 GNPTGQ9UJJ9 305 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 NCOA6Q14686 2063 aaPredicted RBP3.27□□□□□ -1.89
KNL1-202ENST00000399668 MED13Q9UHV7 2174 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 NEDD8-MDP1E9PL57 170 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 UNC5CO95185 931 aa3.27□□□□□ -1.89
KNL1-202ENST00000399668 ADSLP30566 484 aaPredicted RBP3.27□□□□□ -1.89
KNL1-202ENST00000399668 TMED10P49755 219 aaKnown RBP3.27□□□□□ -1.89
KNL1-202ENST00000399668 ANXA11P50995 505 aaKnown RBP3.27□□□□□ -1.89
KNL1-202ENST00000399668 SLC1A5Q15758 541 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms