RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 MIIPQ5JXC2 388 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 GALNT7Q86SF2 657 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 C12orf56Q8IXR9 622 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 KXD1Q9BQD3 176 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 ELAC1Q9H777 363 aaKnown RBP7.99□□□□□ -1.13
USP47-203ENST00000399455 GGA2Q9UJY4 613 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 HPSEQ9Y251 543 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 ANGPT4Q9Y264 503 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 ADGRA3Q8IWK6 1321 aa7.99□□□□□ -1.13
USP47-203ENST00000399455 TCRBV21S2A2A0A5A6 115 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 B4DGG1 531 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 KCNK1O00180 336 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 CD3EAPO15446 510 aaKnown RBP7.98□□□□□ -1.13
USP47-203ENST00000399455 VEGFDO43915 354 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 C22orf31O95567 290 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 TEAD2Q15562 447 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 MSANTD2Q6P1R3 559 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 WDR59Q6PJI9 974 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 FAM220AQ7Z4H9 259 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 NLRP14Q86W24 1093 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 LMX1AQ8TE12 382 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 CLP1Q92989 425 aaKnown RBP7.98□□□□□ -1.13
USP47-203ENST00000399455 CNDP1Q96KN2 507 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 BTBD9Q96Q07 612 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 IRX2Q9BZI1 471 aaPredicted RBP7.98□□□□□ -1.13
USP47-203ENST00000399455 ALKBH4Q9NXW9 302 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 PLK2Q9NYY3 685 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 RAI2Q9Y5P3 530 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 H0Y858 1186 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 NPC1O15118 1278 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 MAT2AP31153 395 aaKnown RBP7.98□□□□□ -1.13
USP47-203ENST00000399455 COPAP53621 1224 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 MTF1Q14872 753 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 CRYMQ14894 314 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 E2F4Q16254 413 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 C15orf59Q2T9L4 293 aaPredicted RBP7.98□□□□□ -1.13
USP47-203ENST00000399455 NEPROQ6NW34 567 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 JSRP1Q96MG2 331 aaPredicted RBP7.98□□□□□ -1.13
USP47-203ENST00000399455 LPIN3Q9BQK8 851 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 SHCBP1LQ9BZQ2 653 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 RACGAP1Q9H0H5 632 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 WDR26Q9H7D7 661 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.98□□□□□ -1.13
USP47-203ENST00000399455 ALBP02768 609 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 FAM163BP0C2L3 166 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 FAM228BP0C875 321 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 CD44P16070 742 aaKnown RBP7.98□□□□□ -1.13
USP47-203ENST00000399455 PNLIPRP1P54315 467 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 ATP6V0D1P61421 351 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 RPL6Q02878 288 aaKnown RBP7.98□□□□□ -1.13
USP47-203ENST00000399455 GNA12Q03113 381 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 FAM187BQ17R55 369 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 ATXN7L2Q5T6C5 722 aaPredicted RBP7.98□□□□□ -1.13
USP47-203ENST00000399455 ANXA8L1Q5VT79 327 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 SLC36A4Q6YBV0 504 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 ZNF398Q8TD17 642 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 NELL1Q92832 810 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 ZHX1-C8orf76Q96EF9 292 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 HNRNPABQ99729 332 aaKnown RBP7.98□□□□□ -1.13
USP47-203ENST00000399455 TNKS2Q9H2K2 1166 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 EFCAB1Q9HAE3 211 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 PLCH1Q4KWH8 1693 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 MSI1O43347 362 aaKnown RBP7.98□□□□□ -1.13
USP47-203ENST00000399455 DGKIO75912 1065 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 FCGR1AP12314 374 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 S100A3P33764 101 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 GRM2Q14416 872 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 LCLAT1Q6UWP7 414 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 ENPP7Q6UWV6 458 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 PHF21BQ96EK2 531 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 FAM111AQ96PZ2 611 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 EVLQ9UI08 416 aaPredicted RBP7.98□□□□□ -1.13
USP47-203ENST00000399455 ASTN1O14525 1302 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 UBDO15205 165 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 WDR47O94967 919 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 CYP1A2P05177 515 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 HNF1BP35680 557 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 DLG4P78352 724 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 CNGA3Q16281 694 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 DAB2IPQ5VWQ8 1189 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 LAYNQ6UX15 382 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 UBE2R2Q712K3 238 aaPredicted RBP7.98□□□□□ -1.13
USP47-203ENST00000399455 ABHD13Q7L211 337 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 ACTRT2Q8TDY3 377 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 BRINP2Q9C0B6 783 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 MTRRQ9UBK8 725 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 MRPL42Q9Y6G3 142 aaKnown RBP7.98□□□□□ -1.13
USP47-203ENST00000399455 PDE9AO76083 593 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 KCNH1O95259 989 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 CTSOP43234 321 aaPredicted RBP7.98□□□□□ -1.13
USP47-203ENST00000399455 IRF5Q13568 498 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 CASP12Q6UXS9 341 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 RNF44Q7L0R7 432 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 FAM129CQ86XR2 697 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 ZBTB2Q8N680 514 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 FOXJ1Q92949 421 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 HLA-CQ95604 372 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 AZIN2Q96A70 460 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 PCED1BQ96HM7 432 aa7.98□□□□□ -1.13
USP47-203ENST00000399455 FAM83DQ9H4H8 585 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms