RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 VPS45Q9NRW7 570 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 HAUS2Q9NVX0 235 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 ZFR2Q9UPR6 939 aaKnown RBP12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 NCKAP1Q9Y2A7 1128 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 MRFAP1Q9Y605 127 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 SLCO1B1Q9Y6L6 691 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 DMDP11532 3685 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 MYLKQ15746 1914 aa12.49□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PLXNA2O75051 1894 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 GPR179Q6PRD1 2367 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 GOLGA6L10A0A0M3HER8 536 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 NPIPB15A6NHN6 443 aaPredicted RBP12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 ESPNB1AK53 854 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 RIOK3O14730 519 aaKnown RBP12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 ZNF500O60304 480 aaPredicted RBP12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 ALPIP09923 528 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 CTPS1P17812 591 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 GM2AP17900 193 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 CNR2P34972 360 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PAFAH1B1P43034 410 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PTGER3P43115 390 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PTPN5P54829 565 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 CDK18Q07002 472 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 C2orf54Q08AI8 447 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 MPP3Q13368 585 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 FGL2Q14314 439 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 GALNT3Q14435 633 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 TRIP13Q15645 432 aaPredicted RBP12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 CDKN3Q16667 212 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 TMEM259Q4ZIN3 620 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 SEL1L3Q68CR1 1132 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 DENND5AQ6IQ26 1287 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 ARHGEF18Q6ZSZ5 1173 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 DPPA4Q7L190 304 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 KDELC2Q7Z4H8 507 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 TTC7BQ86TV6 843 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 KLHL7Q8IXQ5 586 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 TMEFF1Q8IYR6 380 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 LPCAT1Q8NF37 534 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 IPMKQ8NFU5 416 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 OR2T34Q8NGX1 318 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 RAB7BQ96AH8 199 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 FEM1CQ96JP0 617 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 ZC3H10Q96K80 434 aaKnown RBP12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 SPACA7Q96KW9 195 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 FERMT1Q9BQL6 677 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 EPC1Q9H2F5 836 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PREBQ9HCU5 417 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PAK5Q9P286 719 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 B4GALT6Q9UBX8 382 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PCYOX1Q9UHG3 505 aa12.48□□□□□ -0.41
HLA-DQB1-203ENST00000399082 A0A0J9YYE9 177 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 A0A1W2PQ67 120 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PRR23AA6NEV1 266 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 CAPN8A6NHC0 703 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 FAM47DPA6NHR8 397 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 METTL12A8MUP2 240 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 CCDC188H7C350 402 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 LATO43561 262 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 RNGTTO60942 597 aaKnown RBP12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 USP12O75317 370 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 ANXA9O76027 345 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 NDST3O95803 873 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 AGTP01019 485 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 TRBC1P01850 177 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 GEMP55040 296 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 RPL26P61254 145 aaKnown RBP12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 RPL6Q02878 288 aaKnown RBP12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 MSLNQ13421 630 aaPredicted RBP12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 SEMA5AQ13591 1074 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 SPARCL1Q14515 664 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 TMEM52BQ4KMG9 183 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 SYCP2LQ5T4T6 812 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 CFAP58Q5T655 872 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 KIAA0895LQ68EN5 471 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 RANBP10Q6VN20 620 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 SLC36A4Q6YBV0 504 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 TSPAN33Q86UF1 283 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 CBARPQ8N350 705 aaPredicted RBP12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 CCDC89Q8N998 374 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 KIF18AQ8NI77 898 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 BIRC7Q96CA5 298 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 SCRN2Q96FV2 425 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 HSPA12BQ96MM6 686 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 APOL2Q9BQE5 337 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 FICDQ9BVA6 458 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 KDM4CQ9H3R0 1056 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PHTF1Q9UMS5 762 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 RPL26L1Q9UNX3 145 aaKnown RBP12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 SPO11Q9Y5K1 396 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 USP34Q70CQ2 3546 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 MYO15AQ9UKN7 3530 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 TRPM6Q9BX84 2022 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 SCN8AQ9UQD0 1980 aa12.47□□□□□ -0.41
HLA-DQB1-203ENST00000399082 SDK1Q7Z5N4 2213 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 TBC1D3DA0A087WVF3 549 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 TBC1D3IA0A087WXS9 549 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms